RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
COL1A1-213ENST00000511732 MT2AP02795 61 aa7.62□□□□□ -1.19
COL1A1-213ENST00000511732 DSCR8Q96T75 97 aa7.61□□□□□ -1.19
COL1A1-213ENST00000511732 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
COL1A1-213ENST00000511732 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
COL1A1-213ENST00000511732 USH2AO75445 5202 aa7.59□□□□□ -1.19
COL1A1-213ENST00000511732 BAALC-AS2P0C853 105 aa7.59□□□□□ -1.19
COL1A1-213ENST00000511732 MT1FP04733 61 aa7.57□□□□□ -1.2
COL1A1-213ENST00000511732 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
COL1A1-213ENST00000511732 C9JAW5 83 aa7.56□□□□□ -1.2
COL1A1-213ENST00000511732 Q6ZQT0 140 aa7.56□□□□□ -1.2
COL1A1-213ENST00000511732 M0R143 59 aa7.55□□□□□ -1.2
COL1A1-213ENST00000511732 PCP4L1A6NKN8 68 aa7.54□□□□□ -1.2
COL1A1-213ENST00000511732 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
COL1A1-213ENST00000511732 J3KT08 172 aa7.53□□□□□ -1.2
COL1A1-213ENST00000511732 BATFQ16520 125 aa7.53□□□□□ -1.2
COL1A1-213ENST00000511732 NAA38Q9BRA0 125 aaKnown RBP7.53□□□□□ -1.2
COL1A1-213ENST00000511732 LCE2BO14633 110 aa7.52□□□□□ -1.21
COL1A1-213ENST00000511732 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
COL1A1-213ENST00000511732 SPINK7P58062 85 aa7.51□□□□□ -1.21
COL1A1-213ENST00000511732 C21orf62-AS1Q17RA5 79 aa7.51□□□□□ -1.21
COL1A1-213ENST00000511732 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
COL1A1-213ENST00000511732 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
COL1A1-213ENST00000511732 ATXN8Q156A1 80 aa7.49□□□□□ -1.21
COL1A1-213ENST00000511732 NDUFB1O75438 58 aa7.48□□□□□ -1.21
COL1A1-213ENST00000511732 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
COL1A1-213ENST00000511732 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
COL1A1-213ENST00000511732 LOC110117498A0A087WWA1 95 aa7.47□□□□□ -1.21
COL1A1-213ENST00000511732 JMJD7-PLA2G4BH0Y9G9 81 aa7.47□□□□□ -1.21
COL1A1-213ENST00000511732 IGKV3D-7A0A0C4DH55 119 aa7.46□□□□□ -1.22
COL1A1-213ENST00000511732 A8MWP4 228 aa7.46□□□□□ -1.22
COL1A1-213ENST00000511732 MTURNQ8N3F0 131 aa7.46□□□□□ -1.22
COL1A1-213ENST00000511732 A0A1B0GW54 56 aa7.44□□□□□ -1.22
COL1A1-213ENST00000511732 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
COL1A1-213ENST00000511732 C14orf132Q9NPU4 83 aa7.44□□□□□ -1.22
COL1A1-213ENST00000511732 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
COL1A1-213ENST00000511732 PDE6GP18545 87 aa7.41□□□□□ -1.22
COL1A1-213ENST00000511732 Q6ZVQ6 151 aa7.4□□□□□ -1.22
COL1A1-213ENST00000511732 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.22
COL1A1-213ENST00000511732 LYRM7Q5U5X0 104 aa7.39□□□□□ -1.23
COL1A1-213ENST00000511732 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
COL1A1-213ENST00000511732 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
COL1A1-213ENST00000511732 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
COL1A1-213ENST00000511732 NREPQ16612 68 aa7.36□□□□□ -1.23
COL1A1-213ENST00000511732 COL5A1-AS1Q5SY13 56 aa7.36□□□□□ -1.23
COL1A1-213ENST00000511732 TMEM254Q8TBM7 123 aa7.34□□□□□ -1.23
COL1A1-213ENST00000511732 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
COL1A1-213ENST00000511732 K7EQZ3 153 aa7.31□□□□□ -1.24
COL1A1-213ENST00000511732 C9orf118A6NHY6 69 aa7.29□□□□□ -1.24
COL1A1-213ENST00000511732 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
COL1A1-213ENST00000511732 H3BT86 120 aa7.26□□□□□ -1.25
COL1A1-213ENST00000511732 NDUFS5O43920 106 aa7.26□□□□□ -1.25
COL1A1-213ENST00000511732 TAX1BP3O14907 124 aa7.25□□□□□ -1.25
COL1A1-213ENST00000511732 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
COL1A1-213ENST00000511732 Q5W150 140 aa7.25□□□□□ -1.25
COL1A1-213ENST00000511732 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
COL1A1-213ENST00000511732 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
COL1A1-213ENST00000511732 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
COL1A1-213ENST00000511732 BPY2O14599 106 aa7.21□□□□□ -1.26
COL1A1-213ENST00000511732 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
COL1A1-213ENST00000511732 SPCS1Q9Y6A9 102 aa7.21□□□□□ -1.26
COL1A1-213ENST00000511732 GTF2H5Q6ZYL4 71 aa7.2□□□□□ -1.26
COL1A1-213ENST00000511732 Q8N9L7 120 aa7.2□□□□□ -1.26
COL1A1-213ENST00000511732 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
COL1A1-213ENST00000511732 C7orf65Q6ZTY9 151 aa7.17□□□□□ -1.26
COL1A1-213ENST00000511732 HCG22E2RYF7 251 aa7.15□□□□□ -1.26
COL1A1-213ENST00000511732 CASC2Q6XLA1 102 aa7.15□□□□□ -1.26
COL1A1-213ENST00000511732 LINC00846Q9NV44 126 aa7.15□□□□□ -1.26
COL1A1-213ENST00000511732 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
COL1A1-213ENST00000511732 SMCPP49901 116 aaPredicted RBP7.14□□□□□ -1.27
COL1A1-213ENST00000511732 K7EP34 96 aa7.11□□□□□ -1.27
COL1A1-213ENST00000511732 C4orf26Q17RF5 130 aa7.11□□□□□ -1.27
COL1A1-213ENST00000511732 CXCL6P80162 114 aa7.07□□□□□ -1.28
COL1A1-213ENST00000511732 F8W1H4 67 aa7.05□□□□□ -1.28
COL1A1-213ENST00000511732 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
COL1A1-213ENST00000511732 PRO0461Q9UI25 63 aa7.05□□□□□ -1.28
COL1A1-213ENST00000511732 A0A1B0GV90 55 aa7.04□□□□□ -1.28
COL1A1-213ENST00000511732 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
COL1A1-213ENST00000511732 UBL5Q9BZL1 73 aa7.01□□□□□ -1.29
COL1A1-213ENST00000511732 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.3
COL1A1-213ENST00000511732 C1orf64Q8NEQ6 169 aa6.95□□□□□ -1.3
COL1A1-213ENST00000511732 S4R3F8 94 aa6.95□□□□□ -1.3
COL1A1-213ENST00000511732 ETDBQ3ZM63 59 aa6.94□□□□□ -1.3
COL1A1-213ENST00000511732 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
COL1A1-213ENST00000511732 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
COL1A1-213ENST00000511732 MT1BP07438 61 aa6.93□□□□□ -1.3
COL1A1-213ENST00000511732 LCA10Q71F78 164 aa6.93□□□□□ -1.3
COL1A1-213ENST00000511732 CSAG1Q6PB30 78 aa6.9□□□□□ -1.3
COL1A1-213ENST00000511732 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
COL1A1-213ENST00000511732 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
COL1A1-213ENST00000511732 KRTAP19-8Q3LI54 63 aa6.87□□□□□ -1.31
COL1A1-213ENST00000511732 J3QR89 54 aa6.86□□□□□ -1.31
COL1A1-213ENST00000511732 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
COL1A1-213ENST00000511732 A6NN06 94 aa6.84□□□□□ -1.31
COL1A1-213ENST00000511732 Q5VV11 94 aa6.84□□□□□ -1.31
COL1A1-213ENST00000511732 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
COL1A1-213ENST00000511732 A0A087WVE0 104 aa6.81□□□□□ -1.32
COL1A1-213ENST00000511732 ACYP1P07311 99 aa6.8□□□□□ -1.32
COL1A1-213ENST00000511732 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
COL1A1-213ENST00000511732 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms