RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
NEK1-207ENST00000511633 KRTAP13-1Q8IUC0 172 aa5.14□□□□□ -1.59
NEK1-207ENST00000511633 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
NEK1-207ENST00000511633 DMDP11532 3685 aa5.14□□□□□ -1.59
NEK1-207ENST00000511633 RPS29P62273 56 aaKnown RBP5.13□□□□□ -1.59
NEK1-207ENST00000511633 KMT2BQ9UMN6 2715 aaPredicted RBP5.13□□□□□ -1.59
NEK1-207ENST00000511633 APCP25054 2843 aa5.13□□□□□ -1.59
NEK1-207ENST00000511633 SPEGQ15772 3267 aa5.13□□□□□ -1.59
NEK1-207ENST00000511633 KRTAP21-3Q3LHN1 58 aa5.13□□□□□ -1.59
NEK1-207ENST00000511633 ZZEF1O43149 2961 aa5.12□□□□□ -1.59
NEK1-207ENST00000511633 DMXL1Q9Y485 3027 aa5.12□□□□□ -1.59
NEK1-207ENST00000511633 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
NEK1-207ENST00000511633 DMBT1Q9UGM3 2413 aaPredicted RBP5.11□□□□□ -1.59
NEK1-207ENST00000511633 FLG2Q5D862 2391 aaPredicted RBP5.1□□□□□ -1.59
NEK1-207ENST00000511633 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
NEK1-207ENST00000511633 ROMO1P60602 79 aa5.09□□□□□ -1.59
NEK1-207ENST00000511633 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
NEK1-207ENST00000511633 TENM4Q6N022 2769 aa5.06□□□□□ -1.6
NEK1-207ENST00000511633 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
NEK1-207ENST00000511633 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
NEK1-207ENST00000511633 NIPBLQ6KC79 2804 aaeCLIP5.02□□□□□ -1.61
NEK1-207ENST00000511633 HRNRQ86YZ3 2850 aaPredicted RBP5.01□□□□□ -1.61
NEK1-207ENST00000511633 A8MUU9 505 aa5.01□□□□□ -1.61
NEK1-207ENST00000511633 LOC400499M0QZD8 3231 aa5□□□□□ -1.61
NEK1-207ENST00000511633 DCHS2Q6V1P9 2916 aa5□□□□□ -1.61
NEK1-207ENST00000511633 WDFY3Q8IZQ1 3526 aa5□□□□□ -1.61
NEK1-207ENST00000511633 A8MU10 97 aa4.99□□□□□ -1.61
NEK1-207ENST00000511633 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
NEK1-207ENST00000511633 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
NEK1-207ENST00000511633 FBN2P35556 2912 aa4.9□□□□□ -1.62
NEK1-207ENST00000511633 ASPMQ8IZT6 3477 aa4.9□□□□□ -1.62
NEK1-207ENST00000511633 NF1P21359 2839 aa4.88□□□□□ -1.63
NEK1-207ENST00000511633 XP32Q5T750 250 aa4.88□□□□□ -1.63
NEK1-207ENST00000511633 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
NEK1-207ENST00000511633 RELNP78509 3460 aa4.86□□□□□ -1.63
NEK1-207ENST00000511633 A6NN06 94 aa4.84□□□□□ -1.64
NEK1-207ENST00000511633 LAMA5O15230 3695 aa4.83□□□□□ -1.64
NEK1-207ENST00000511633 H3BS24 57 aa4.82□□□□□ -1.64
NEK1-207ENST00000511633 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
NEK1-207ENST00000511633 A0A1B0GVY2 172 aa4.81□□□□□ -1.64
NEK1-207ENST00000511633 TENM2Q9NT68 2774 aa4.79□□□□□ -1.64
NEK1-207ENST00000511633 CELSR1Q9NYQ6 3014 aa4.78□□□□□ -1.64
NEK1-207ENST00000511633 ZFHX4Q86UP3 3567 aa4.78□□□□□ -1.64
NEK1-207ENST00000511633 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
NEK1-207ENST00000511633 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
NEK1-207ENST00000511633 TNP1P09430 55 aa4.76□□□□□ -1.65
NEK1-207ENST00000511633 MXRA5Q9NR99 2828 aa4.76□□□□□ -1.65
NEK1-207ENST00000511633 SPENQ96T58 3664 aaKnown RBP4.75□□□□□ -1.65
NEK1-207ENST00000511633 DCHS1Q96JQ0 3298 aa4.75□□□□□ -1.65
NEK1-207ENST00000511633 KRTAP16-1A8MUX0 517 aa4.75□□□□□ -1.65
NEK1-207ENST00000511633 TENM3Q9P273 2699 aa4.72□□□□□ -1.65
NEK1-207ENST00000511633 KRTAP13-3Q3SY46 172 aa4.72□□□□□ -1.65
NEK1-207ENST00000511633 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.66
NEK1-207ENST00000511633 KRTAP10-8P60410 259 aa4.71□□□□□ -1.66
NEK1-207ENST00000511633 PDZD2O15018 2839 aa4.68□□□□□ -1.66
NEK1-207ENST00000511633 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
NEK1-207ENST00000511633 PKD1L1Q8TDX9 2849 aa4.65□□□□□ -1.66
NEK1-207ENST00000511633 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
NEK1-207ENST00000511633 H0YAA0 97 aa4.65□□□□□ -1.67
NEK1-207ENST00000511633 BSNQ9UPA5 3926 aa4.62□□□□□ -1.67
NEK1-207ENST00000511633 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
NEK1-207ENST00000511633 P0C880 135 aa4.61□□□□□ -1.67
NEK1-207ENST00000511633 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
NEK1-207ENST00000511633 SMG1Q96Q15 3661 aaKnown RBP4.6□□□□□ -1.67
NEK1-207ENST00000511633 VWFP04275 2813 aa4.6□□□□□ -1.67
NEK1-207ENST00000511633 TGP01266 2768 aa4.59□□□□□ -1.68
NEK1-207ENST00000511633 OTOGQ6ZRI0 2925 aa4.58□□□□□ -1.68
NEK1-207ENST00000511633 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
NEK1-207ENST00000511633 ZFHX3Q15911 3703 aa4.54□□□□□ -1.68
NEK1-207ENST00000511633 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
NEK1-207ENST00000511633 ANK3Q12955 4377 aaKnown RBP4.52□□□□□ -1.69
NEK1-207ENST00000511633 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
NEK1-207ENST00000511633 SVEP1Q4LDE5 3571 aa4.48□□□□□ -1.69
NEK1-207ENST00000511633 CSMD2Q7Z408 3487 aa4.47□□□□□ -1.69
NEK1-207ENST00000511633 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
NEK1-207ENST00000511633 VPS13CQ709C8 3753 aa4.41□□□□□ -1.7
NEK1-207ENST00000511633 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
NEK1-207ENST00000511633 TRRAPQ9Y4A5 3859 aa4.37□□□□□ -1.71
NEK1-207ENST00000511633 CUBNO60494 3623 aa4.35□□□□□ -1.71
NEK1-207ENST00000511633 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
NEK1-207ENST00000511633 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
NEK1-207ENST00000511633 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
NEK1-207ENST00000511633 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
NEK1-207ENST00000511633 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
NEK1-207ENST00000511633 HUWE1Q7Z6Z7 4374 aaKnown RBP4.26□□□□□ -1.73
NEK1-207ENST00000511633 MEGF8Q7Z7M0 2845 aa4.26□□□□□ -1.73
NEK1-207ENST00000511633 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
NEK1-207ENST00000511633 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
NEK1-207ENST00000511633 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
NEK1-207ENST00000511633 ZNF469Q96JG9 3925 aaPredicted RBP4.2□□□□□ -1.74
NEK1-207ENST00000511633 COL7A1Q02388 2944 aa4.2□□□□□ -1.74
NEK1-207ENST00000511633 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
NEK1-207ENST00000511633 AKAP9Q99996 3911 aa4.15□□□□□ -1.75
NEK1-207ENST00000511633 ALMS1Q8TCU4 4167 aa4.13□□□□□ -1.75
NEK1-207ENST00000511633 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
NEK1-207ENST00000511633 KRTAP3-3Q9BYR6 98 aa4.11□□□□□ -1.75
NEK1-207ENST00000511633 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
NEK1-207ENST00000511633 DNAH9Q9NYC9 4486 aa4.04□□□□□ -1.76
NEK1-207ENST00000511633 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
NEK1-207ENST00000511633 KRTAP10-12P60413 245 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms