RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-208ENST00000511452 H3BNG1 76 aa0.29□□□□□ -2.36
NFXL1-208ENST00000511452 A0A0C4DFX4 3053 aa0.28□□□□□ -2.36
NFXL1-208ENST00000511452 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
NFXL1-208ENST00000511452 NDUFA1O15239 70 aa0.28□□□□□ -2.36
NFXL1-208ENST00000511452 HECTD4Q9Y4D8 3996 aa0.27□□□□□ -2.37
NFXL1-208ENST00000511452 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
NFXL1-208ENST00000511452 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
NFXL1-208ENST00000511452 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
NFXL1-208ENST00000511452 C9orf92A6NGG3 77 aa0.26□□□□□ -2.37
NFXL1-208ENST00000511452 SPRR2BP35325 72 aa0.26□□□□□ -2.37
NFXL1-208ENST00000511452 TRPM2O94759 1503 aa0.26□□□□□ -2.37
NFXL1-208ENST00000511452 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 NCOR2Q9Y618 2525 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 SAMD9LQ8IVG5 1584 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 DEFB131AP59861 70 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 HSPG2P98160 4391 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 ACANP16112 2415 aa0.25□□□□□ -2.37
NFXL1-208ENST00000511452 SETXQ7Z333 2677 aaKnown RBP0.24□□□□□ -2.37
NFXL1-208ENST00000511452 M0QY20 66 aa0.24□□□□□ -2.37
NFXL1-208ENST00000511452 PTPN13Q12923 2485 aa0.24□□□□□ -2.37
NFXL1-208ENST00000511452 LRP1BQ9NZR2 4599 aa0.24□□□□□ -2.37
NFXL1-208ENST00000511452 NBASA2RRP1 2371 aa0.24□□□□□ -2.37
NFXL1-208ENST00000511452 NSD1Q96L73 2696 aaPredicted RBP0.23□□□□□ -2.37
NFXL1-208ENST00000511452 HECTD1Q9ULT8 2610 aa0.23□□□□□ -2.37
NFXL1-208ENST00000511452 WNK1Q9H4A3 2382 aa0.23□□□□□ -2.37
NFXL1-208ENST00000511452 HIVEP3Q5T1R4 2406 aa0.23□□□□□ -2.37
NFXL1-208ENST00000511452 DNAH3Q8TD57 4116 aa0.23□□□□□ -2.37
NFXL1-208ENST00000511452 DCHS2Q6V1P9 2916 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 CEP290O15078 2479 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 APC2O95996 2303 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 DMXL1Q9Y485 3027 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 CACNA1AO00555 2505 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 NF1P21359 2839 aa0.22□□□□□ -2.37
NFXL1-208ENST00000511452 SRRM2Q9UQ35 2752 aaKnown RBP0.22□□□□□ -2.37
NFXL1-208ENST00000511452 ZZEF1O43149 2961 aa0.21□□□□□ -2.38
NFXL1-208ENST00000511452 DNAH11Q96DT5 4516 aa0.21□□□□□ -2.38
NFXL1-208ENST00000511452 PKHD1P08F94 4074 aa0.21□□□□□ -2.38
NFXL1-208ENST00000511452 CUBNO60494 3623 aa0.21□□□□□ -2.38
NFXL1-208ENST00000511452 PKD1L2Q7Z442 2459 aa0.21□□□□□ -2.38
NFXL1-208ENST00000511452 DEFB110Q30KQ9 67 aa0.2□□□□□ -2.38
NFXL1-208ENST00000511452 FLNBO75369 2602 aaKnown RBP0.2□□□□□ -2.38
NFXL1-208ENST00000511452 DNAH2Q9P225 4427 aa0.2□□□□□ -2.38
NFXL1-208ENST00000511452 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
NFXL1-208ENST00000511452 SPTBN4Q9H254 2564 aa0.19□□□□□ -2.38
NFXL1-208ENST00000511452 ANK3Q12955 4377 aaKnown RBP0.19□□□□□ -2.38
NFXL1-208ENST00000511452 FLNCQ14315 2725 aa0.19□□□□□ -2.38
NFXL1-208ENST00000511452 AKAP9Q99996 3911 aa0.19□□□□□ -2.38
NFXL1-208ENST00000511452 A8MTW9 85 aa0.19□□□□□ -2.38
NFXL1-208ENST00000511452 MAP1BP46821 2468 aaKnown RBP0.19□□□□□ -2.38
NFXL1-208ENST00000511452 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
NFXL1-208ENST00000511452 TACC2O95359 2948 aa0.18□□□□□ -2.38
NFXL1-208ENST00000511452 TNP1P09430 55 aa0.18□□□□□ -2.38
NFXL1-208ENST00000511452 SPRR2AP35326 72 aa0.18□□□□□ -2.38
NFXL1-208ENST00000511452 STAB1Q9NY15 2570 aa0.18□□□□□ -2.38
NFXL1-208ENST00000511452 SPENQ96T58 3664 aaKnown RBP0.18□□□□□ -2.38
NFXL1-208ENST00000511452 GCN1Q92616 2671 aaKnown RBP0.18□□□□□ -2.38
NFXL1-208ENST00000511452 APOBP04114 4563 aaKnown RBP0.18□□□□□ -2.38
NFXL1-208ENST00000511452 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
NFXL1-208ENST00000511452 DNAH6Q9C0G6 4158 aa0.17□□□□□ -2.38
NFXL1-208ENST00000511452 CREBBPQ92793 2442 aa0.17□□□□□ -2.38
NFXL1-208ENST00000511452 KALRNO60229 2985 aa0.17□□□□□ -2.38
NFXL1-208ENST00000511452 M0QZ58 72 aa0.17□□□□□ -2.38
NFXL1-208ENST00000511452 POLR2KP53803 58 aaKnown RBP0.17□□□□□ -2.38
NFXL1-208ENST00000511452 DNAH9Q9NYC9 4486 aa0.16□□□□□ -2.38
NFXL1-208ENST00000511452 FAT3Q8TDW7 4589 aa0.16□□□□□ -2.38
NFXL1-208ENST00000511452 LRP2P98164 4655 aa0.16□□□□□ -2.38
NFXL1-208ENST00000511452 COL6A3P12111 3177 aa0.16□□□□□ -2.38
NFXL1-208ENST00000511452 DYNC2H1Q8NCM8 4307 aaKnown RBP0.15□□□□□ -2.38
NFXL1-208ENST00000511452 DNAH7Q8WXX0 4024 aa0.15□□□□□ -2.39
NFXL1-208ENST00000511452 CLPSL2Q6UWE3 100 aa0.15□□□□□ -2.39
NFXL1-208ENST00000511452 SONP18583 2426 aaKnown RBP0.14□□□□□ -2.39
NFXL1-208ENST00000511452 COL6A5A8TX70 2615 aa0.14□□□□□ -2.39
NFXL1-208ENST00000511452 MT1AP04731 61 aa0.14□□□□□ -2.39
NFXL1-208ENST00000511452 SPRR2EP22531 72 aa0.14□□□□□ -2.39
NFXL1-208ENST00000511452 HTTP42858 3142 aa0.14□□□□□ -2.39
NFXL1-208ENST00000511452 MROH2BQ7Z745 1585 aa0.14□□□□□ -2.39
NFXL1-208ENST00000511452 MACF1Q9UPN3 7388 aaKnown RBP0.14□□□□□ -2.39
NFXL1-208ENST00000511452 ZANQ9Y493 2812 aa0.14□□□□□ -2.39
NFXL1-208ENST00000511452 VPS13DQ5THJ4 4388 aa0.13□□□□□ -2.39
NFXL1-208ENST00000511452 MAP1AP78559 2803 aaPredicted RBP0.13□□□□□ -2.39
NFXL1-208ENST00000511452 RPL39P62891 51 aaKnown RBP0.13□□□□□ -2.39
NFXL1-208ENST00000511452 DUOX1Q9NRD9 1551 aa0.13□□□□□ -2.39
NFXL1-208ENST00000511452 SETD2Q9BYW2 2564 aaPredicted RBP0.13□□□□□ -2.39
NFXL1-208ENST00000511452 TRIOO75962 3097 aa0.12□□□□□ -2.39
NFXL1-208ENST00000511452 NBPF19A0A087WUL8 3843 aa0.12□□□□□ -2.39
NFXL1-208ENST00000511452 SNRPGP62308 76 aaKnown RBP0.12□□□□□ -2.39
NFXL1-208ENST00000511452 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
NFXL1-208ENST00000511452 FAT1Q14517 4588 aa0.12□□□□□ -2.39
NFXL1-208ENST00000511452 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
NFXL1-208ENST00000511452 RANBP2P49792 3224 aaKnown RBP0.11□□□□□ -2.39
NFXL1-208ENST00000511452 GCC2Q8IWJ2 1684 aa0.11□□□□□ -2.39
NFXL1-208ENST00000511452 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
NFXL1-208ENST00000511452 DNAH1Q9P2D7 4330 aa0.1□□□□□ -2.39
NFXL1-208ENST00000511452 FRYQ5TBA9 3013 aa0.1□□□□□ -2.39
NFXL1-208ENST00000511452 SPRR2FQ96RM1 72 aa0.1□□□□□ -2.39
NFXL1-208ENST00000511452 CHD7Q9P2D1 2997 aa0.1□□□□□ -2.39
NFXL1-208ENST00000511452 LAMA5O15230 3695 aa0.1□□□□□ -2.39
NFXL1-208ENST00000511452 ANKRD11Q6UB99 2663 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms