RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-208ENST00000511452 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
NFXL1-208ENST00000511452 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
NFXL1-208ENST00000511452 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
NFXL1-208ENST00000511452 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
NFXL1-208ENST00000511452 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
NFXL1-208ENST00000511452 FOXD1Q16676 465 aa20.09■□□□□ 0.81
NFXL1-208ENST00000511452 MSH5O43196 834 aa19.24■□□□□ 0.67
NFXL1-208ENST00000511452 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
NFXL1-208ENST00000511452 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
NFXL1-208ENST00000511452 ADRA2BP18089 450 aa18.07■□□□□ 0.48
NFXL1-208ENST00000511452 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
NFXL1-208ENST00000511452 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
NFXL1-208ENST00000511452 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
NFXL1-208ENST00000511452 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
NFXL1-208ENST00000511452 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
NFXL1-208ENST00000511452 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
NFXL1-208ENST00000511452 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
NFXL1-208ENST00000511452 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
NFXL1-208ENST00000511452 POTEHQ6S545 545 aa15.98■□□□□ 0.15
NFXL1-208ENST00000511452 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
NFXL1-208ENST00000511452 PPP4R3CPQ6ZMV5 832 aa15.63■□□□□ 0.09
NFXL1-208ENST00000511452 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
NFXL1-208ENST00000511452 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
NFXL1-208ENST00000511452 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
NFXL1-208ENST00000511452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
NFXL1-208ENST00000511452 DSG3P32926 999 aa14.92□□□□□ -0.02
NFXL1-208ENST00000511452 CAPN15O75808 1086 aa14.88□□□□□ -0.03
NFXL1-208ENST00000511452 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
NFXL1-208ENST00000511452 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
NFXL1-208ENST00000511452 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
NFXL1-208ENST00000511452 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
NFXL1-208ENST00000511452 ABCB7O75027 752 aa14.46□□□□□ -0.09
NFXL1-208ENST00000511452 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
NFXL1-208ENST00000511452 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
NFXL1-208ENST00000511452 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
NFXL1-208ENST00000511452 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
NFXL1-208ENST00000511452 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
NFXL1-208ENST00000511452 APLP2Q06481 763 aa14.29□□□□□ -0.12
NFXL1-208ENST00000511452 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
NFXL1-208ENST00000511452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
NFXL1-208ENST00000511452 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
NFXL1-208ENST00000511452 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
NFXL1-208ENST00000511452 HAX1O00165 279 aa13.84□□□□□ -0.19
NFXL1-208ENST00000511452 POLA2Q14181 598 aa13.82□□□□□ -0.2
NFXL1-208ENST00000511452 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
NFXL1-208ENST00000511452 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
NFXL1-208ENST00000511452 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
NFXL1-208ENST00000511452 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
NFXL1-208ENST00000511452 KCNA4P22459 653 aa13.58□□□□□ -0.24
NFXL1-208ENST00000511452 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
NFXL1-208ENST00000511452 LHX8Q68G74 356 aa13.53□□□□□ -0.24
NFXL1-208ENST00000511452 PITPNM1O00562 1244 aa13.52□□□□□ -0.25
NFXL1-208ENST00000511452 EVX2Q03828 476 aa13.51□□□□□ -0.25
NFXL1-208ENST00000511452 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
NFXL1-208ENST00000511452 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
NFXL1-208ENST00000511452 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
NFXL1-208ENST00000511452 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
NFXL1-208ENST00000511452 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
NFXL1-208ENST00000511452 GABBR2O75899 941 aa13.16□□□□□ -0.3
NFXL1-208ENST00000511452 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
NFXL1-208ENST00000511452 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
NFXL1-208ENST00000511452 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
NFXL1-208ENST00000511452 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
NFXL1-208ENST00000511452 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
NFXL1-208ENST00000511452 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
NFXL1-208ENST00000511452 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
NFXL1-208ENST00000511452 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
NFXL1-208ENST00000511452 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
NFXL1-208ENST00000511452 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
NFXL1-208ENST00000511452 FBLN2P98095 1184 aa12.82□□□□□ -0.36
NFXL1-208ENST00000511452 POTEMA6NI47 508 aa12.8□□□□□ -0.36
NFXL1-208ENST00000511452 CLCN6P51797 869 aa12.77□□□□□ -0.37
NFXL1-208ENST00000511452 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
NFXL1-208ENST00000511452 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
NFXL1-208ENST00000511452 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
NFXL1-208ENST00000511452 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
NFXL1-208ENST00000511452 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
NFXL1-208ENST00000511452 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
NFXL1-208ENST00000511452 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
NFXL1-208ENST00000511452 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
NFXL1-208ENST00000511452 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
NFXL1-208ENST00000511452 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
NFXL1-208ENST00000511452 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
NFXL1-208ENST00000511452 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
NFXL1-208ENST00000511452 ZBTB22O15209 634 aa12.45□□□□□ -0.42
NFXL1-208ENST00000511452 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
NFXL1-208ENST00000511452 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
NFXL1-208ENST00000511452 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
NFXL1-208ENST00000511452 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
NFXL1-208ENST00000511452 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
NFXL1-208ENST00000511452 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
NFXL1-208ENST00000511452 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
NFXL1-208ENST00000511452 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
NFXL1-208ENST00000511452 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
NFXL1-208ENST00000511452 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
NFXL1-208ENST00000511452 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
NFXL1-208ENST00000511452 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
NFXL1-208ENST00000511452 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
NFXL1-208ENST00000511452 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
NFXL1-208ENST00000511452 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms