RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 UBR5O95071 2799 aaPredicted RBP5.53□□□□□ -1.52
TRIO-214ENST00000509967 KRTAP1-5Q9BYS1 174 aa5.53□□□□□ -1.52
TRIO-214ENST00000509967 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
TRIO-214ENST00000509967 S4R3F8 94 aa5.53□□□□□ -1.52
TRIO-214ENST00000509967 NOTCH1P46531 2555 aa5.52□□□□□ -1.53
TRIO-214ENST00000509967 KMT2BQ9UMN6 2715 aaPredicted RBP5.52□□□□□ -1.53
TRIO-214ENST00000509967 APCP25054 2843 aa5.51□□□□□ -1.53
TRIO-214ENST00000509967 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
TRIO-214ENST00000509967 NBEAL1Q6ZS30 2694 aa5.5□□□□□ -1.53
TRIO-214ENST00000509967 SPINK7P58062 85 aa5.49□□□□□ -1.53
TRIO-214ENST00000509967 MXRA5Q9NR99 2828 aa5.48□□□□□ -1.53
TRIO-214ENST00000509967 A0A0D9SG42 100 aa5.48□□□□□ -1.53
TRIO-214ENST00000509967 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
TRIO-214ENST00000509967 A0A087X002 238 aa5.47□□□□□ -1.53
TRIO-214ENST00000509967 NSD1Q96L73 2696 aaPredicted RBP5.46□□□□□ -1.53
TRIO-214ENST00000509967 VPS13CQ709C8 3753 aa5.46□□□□□ -1.54
TRIO-214ENST00000509967 NIPBLQ6KC79 2804 aaeCLIP5.45□□□□□ -1.54
TRIO-214ENST00000509967 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
TRIO-214ENST00000509967 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
TRIO-214ENST00000509967 NBEAL2Q6ZNJ1 2754 aa5.43□□□□□ -1.54
TRIO-214ENST00000509967 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
TRIO-214ENST00000509967 SPATA8Q6RVD6 105 aa5.42□□□□□ -1.54
TRIO-214ENST00000509967 ZFHX3Q15911 3703 aa5.41□□□□□ -1.54
TRIO-214ENST00000509967 ROMO1P60602 79 aa5.41□□□□□ -1.54
TRIO-214ENST00000509967 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
TRIO-214ENST00000509967 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
TRIO-214ENST00000509967 Q6ZRN7 208 aaPredicted RBP5.4□□□□□ -1.54
TRIO-214ENST00000509967 TENM4Q6N022 2769 aa5.4□□□□□ -1.55
TRIO-214ENST00000509967 R4GN34 69 aa5.35□□□□□ -1.55
TRIO-214ENST00000509967 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
TRIO-214ENST00000509967 Q5VSD8 79 aa5.35□□□□□ -1.55
TRIO-214ENST00000509967 A8MU10 97 aa5.33□□□□□ -1.56
TRIO-214ENST00000509967 PANO1I0J062 215 aa5.33□□□□□ -1.56
TRIO-214ENST00000509967 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
TRIO-214ENST00000509967 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
TRIO-214ENST00000509967 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
TRIO-214ENST00000509967 A6NN06 94 aa5.3□□□□□ -1.56
TRIO-214ENST00000509967 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
TRIO-214ENST00000509967 M0QZ58 72 aa5.27□□□□□ -1.57
TRIO-214ENST00000509967 NBPF19A0A087WUL8 3843 aa5.26□□□□□ -1.57
TRIO-214ENST00000509967 KRTAP11-1Q8IUC1 163 aa5.25□□□□□ -1.57
TRIO-214ENST00000509967 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
TRIO-214ENST00000509967 VWFP04275 2813 aa5.22□□□□□ -1.57
TRIO-214ENST00000509967 M0R2T5 61 aa5.21□□□□□ -1.57
TRIO-214ENST00000509967 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.58
TRIO-214ENST00000509967 A8MUU9 505 aa5.21□□□□□ -1.58
TRIO-214ENST00000509967 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
TRIO-214ENST00000509967 C20orf166-AS1Q96NR2 134 aa5.2□□□□□ -1.58
TRIO-214ENST00000509967 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
TRIO-214ENST00000509967 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
TRIO-214ENST00000509967 PDZD2O15018 2839 aa5.18□□□□□ -1.58
TRIO-214ENST00000509967 TENM1Q9UKZ4 2725 aa5.17□□□□□ -1.58
TRIO-214ENST00000509967 ZNF469Q96JG9 3925 aaPredicted RBP5.17□□□□□ -1.58
TRIO-214ENST00000509967 FBN1P35555 2871 aaKnown RBP5.15□□□□□ -1.58
TRIO-214ENST00000509967 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
TRIO-214ENST00000509967 PKD1L1Q8TDX9 2849 aa5.06□□□□□ -1.6
TRIO-214ENST00000509967 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
TRIO-214ENST00000509967 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
TRIO-214ENST00000509967 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
TRIO-214ENST00000509967 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
TRIO-214ENST00000509967 TENM3Q9P273 2699 aa4.97□□□□□ -1.61
TRIO-214ENST00000509967 TNP1P09430 55 aa4.96□□□□□ -1.61
TRIO-214ENST00000509967 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
TRIO-214ENST00000509967 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
TRIO-214ENST00000509967 TENM2Q9NT68 2774 aa4.93□□□□□ -1.62
TRIO-214ENST00000509967 AKAP9Q99996 3911 aa4.93□□□□□ -1.62
TRIO-214ENST00000509967 XP32Q5T750 250 aa4.92□□□□□ -1.62
TRIO-214ENST00000509967 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
TRIO-214ENST00000509967 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
TRIO-214ENST00000509967 H0YAA0 97 aa4.86□□□□□ -1.63
TRIO-214ENST00000509967 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
TRIO-214ENST00000509967 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
TRIO-214ENST00000509967 P0C880 135 aa4.78□□□□□ -1.64
TRIO-214ENST00000509967 TGP01266 2768 aa4.75□□□□□ -1.65
TRIO-214ENST00000509967 KRTAP10-8P60410 259 aa4.75□□□□□ -1.65
TRIO-214ENST00000509967 A0A1B0GVY2 172 aa4.74□□□□□ -1.65
TRIO-214ENST00000509967 FBN3Q75N90 2809 aa4.74□□□□□ -1.65
TRIO-214ENST00000509967 CSMD3Q7Z407 3707 aa4.73□□□□□ -1.65
TRIO-214ENST00000509967 COL7A1Q02388 2944 aa4.7□□□□□ -1.66
TRIO-214ENST00000509967 SRRM2Q9UQ35 2752 aaKnown RBP4.69□□□□□ -1.66
TRIO-214ENST00000509967 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
TRIO-214ENST00000509967 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
TRIO-214ENST00000509967 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
TRIO-214ENST00000509967 ANK2Q01484 3957 aa4.53□□□□□ -1.68
TRIO-214ENST00000509967 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
TRIO-214ENST00000509967 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
TRIO-214ENST00000509967 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
TRIO-214ENST00000509967 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
TRIO-214ENST00000509967 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
TRIO-214ENST00000509967 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
TRIO-214ENST00000509967 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
TRIO-214ENST00000509967 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
TRIO-214ENST00000509967 CMYA5Q8N3K9 4069 aa4.42□□□□□ -1.7
TRIO-214ENST00000509967 DNAH10Q8IVF4 4471 aa4.4□□□□□ -1.71
TRIO-214ENST00000509967 LYSTQ99698 3801 aa4.4□□□□□ -1.71
TRIO-214ENST00000509967 DNAH3Q8TD57 4116 aa4.38□□□□□ -1.71
TRIO-214ENST00000509967 DNAH9Q9NYC9 4486 aa4.36□□□□□ -1.71
TRIO-214ENST00000509967 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
TRIO-214ENST00000509967 DNAH1Q9P2D7 4330 aa4.35□□□□□ -1.71
TRIO-214ENST00000509967 DNHD1Q96M86 4753 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms