RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 H0Y9P7 68 aa4.5□□□□□ -1.69
CAST-228ENST00000509903 MMP24-AS1A0A0U1RRL7 71 aa4.49□□□□□ -1.69
CAST-228ENST00000509903 ANAPC11Q9NYG5 84 aa4.49□□□□□ -1.69
CAST-228ENST00000509903 hDV103S1A0JD37 113 aa4.48□□□□□ -1.69
CAST-228ENST00000509903 Q96NJ1 140 aa4.48□□□□□ -1.69
CAST-228ENST00000509903 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
CAST-228ENST00000509903 H3BPC8 53 aa4.48□□□□□ -1.69
CAST-228ENST00000509903 FAM229BQ4G0N7 80 aa4.48□□□□□ -1.69
CAST-228ENST00000509903 PRR4Q16378 134 aa4.47□□□□□ -1.69
CAST-228ENST00000509903 DNAH8Q96JB1 4490 aa4.47□□□□□ -1.69
CAST-228ENST00000509903 IGLV7-43P04211 117 aa4.47□□□□□ -1.69
CAST-228ENST00000509903 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
CAST-228ENST00000509903 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
CAST-228ENST00000509903 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
CAST-228ENST00000509903 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
CAST-228ENST00000509903 FRAS1Q86XX4 4008 aa4.45□□□□□ -1.7
CAST-228ENST00000509903 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
CAST-228ENST00000509903 XP32Q5T750 250 aa4.44□□□□□ -1.7
CAST-228ENST00000509903 TP53AIP1Q9HCN2 124 aa4.44□□□□□ -1.7
CAST-228ENST00000509903 NDUFS5O43920 106 aa4.44□□□□□ -1.7
CAST-228ENST00000509903 CIRBP-AS1Q8TBR5 109 aa4.43□□□□□ -1.7
CAST-228ENST00000509903 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
CAST-228ENST00000509903 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
CAST-228ENST00000509903 SPINK6Q6UWN8 80 aa4.42□□□□□ -1.7
CAST-228ENST00000509903 DNAH5Q8TE73 4624 aa4.41□□□□□ -1.7
CAST-228ENST00000509903 MRPL34Q9BQ48 92 aaKnown RBP4.41□□□□□ -1.7
CAST-228ENST00000509903 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
CAST-228ENST00000509903 DNAH11Q96DT5 4516 aa4.41□□□□□ -1.7
CAST-228ENST00000509903 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.7
CAST-228ENST00000509903 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
CAST-228ENST00000509903 CD164Q04900 197 aa4.4□□□□□ -1.7
CAST-228ENST00000509903 LCE4AQ5TA78 99 aa4.4□□□□□ -1.7
CAST-228ENST00000509903 SSBP3-AS1Q7Z2R9 100 aa4.4□□□□□ -1.7
CAST-228ENST00000509903 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
CAST-228ENST00000509903 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
CAST-228ENST00000509903 KRTAP10-1P60331 282 aa4.38□□□□□ -1.71
CAST-228ENST00000509903 Q1T7F1 81 aa4.38□□□□□ -1.71
CAST-228ENST00000509903 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
CAST-228ENST00000509903 Q6ZSA8 131 aa4.37□□□□□ -1.71
CAST-228ENST00000509903 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
CAST-228ENST00000509903 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
CAST-228ENST00000509903 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
CAST-228ENST00000509903 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
CAST-228ENST00000509903 C8orf87E5RJ46 101 aa4.35□□□□□ -1.71
CAST-228ENST00000509903 HYDINQ4G0P3 5121 aa4.35□□□□□ -1.71
CAST-228ENST00000509903 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
CAST-228ENST00000509903 PSPHP1O15172 72 aa4.34□□□□□ -1.72
CAST-228ENST00000509903 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.72
CAST-228ENST00000509903 LOC101927531A0A1B0GV80 90 aa4.33□□□□□ -1.72
CAST-228ENST00000509903 COA5Q86WW8 74 aa4.33□□□□□ -1.72
CAST-228ENST00000509903 LRP1BQ9NZR2 4599 aa4.33□□□□□ -1.72
CAST-228ENST00000509903 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
CAST-228ENST00000509903 LINC00313P59037 77 aa4.31□□□□□ -1.72
CAST-228ENST00000509903 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
CAST-228ENST00000509903 PKD1P98161 4303 aa4.31□□□□□ -1.72
CAST-228ENST00000509903 Q5W150 140 aa4.31□□□□□ -1.72
CAST-228ENST00000509903 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
CAST-228ENST00000509903 A8MUN3 132 aa4.3□□□□□ -1.72
CAST-228ENST00000509903 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
CAST-228ENST00000509903 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
CAST-228ENST00000509903 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
CAST-228ENST00000509903 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
CAST-228ENST00000509903 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
CAST-228ENST00000509903 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
CAST-228ENST00000509903 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
CAST-228ENST00000509903 BIRC6Q9NR09 4857 aa4.27□□□□□ -1.73
CAST-228ENST00000509903 HRES1P13985 223 aa4.26□□□□□ -1.73
CAST-228ENST00000509903 Q5VV11 94 aa4.26□□□□□ -1.73
CAST-228ENST00000509903 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
CAST-228ENST00000509903 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
CAST-228ENST00000509903 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
CAST-228ENST00000509903 SPINK1P00995 79 aa4.25□□□□□ -1.73
CAST-228ENST00000509903 SPAG11AQ6PDA7 123 aa4.24□□□□□ -1.73
CAST-228ENST00000509903 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
CAST-228ENST00000509903 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
CAST-228ENST00000509903 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
CAST-228ENST00000509903 SACSQ9NZJ4 4579 aa4.23□□□□□ -1.73
CAST-228ENST00000509903 ACYP2P14621 99 aa4.23□□□□□ -1.73
CAST-228ENST00000509903 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
CAST-228ENST00000509903 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.73
CAST-228ENST00000509903 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.73
CAST-228ENST00000509903 KMT2CQ8NEZ4 4911 aaKnown RBP4.21□□□□□ -1.74
CAST-228ENST00000509903 IGKV2D-30A0A075B6S6 120 aa4.21□□□□□ -1.74
CAST-228ENST00000509903 A6NED7 52 aa4.2□□□□□ -1.74
CAST-228ENST00000509903 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
CAST-228ENST00000509903 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
CAST-228ENST00000509903 DYNC1H1Q14204 4646 aaKnown RBP4.19□□□□□ -1.74
CAST-228ENST00000509903 RPS29P62273 56 aaKnown RBP4.19□□□□□ -1.74
CAST-228ENST00000509903 RYR3Q15413 4870 aa4.18□□□□□ -1.74
CAST-228ENST00000509903 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
CAST-228ENST00000509903 A8MU10 97 aa4.16□□□□□ -1.74
CAST-228ENST00000509903 RYR2Q92736 4967 aa4.16□□□□□ -1.74
CAST-228ENST00000509903 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
CAST-228ENST00000509903 FAT1Q14517 4588 aa4.15□□□□□ -1.75
CAST-228ENST00000509903 C7orf65Q6ZTY9 151 aa4.14□□□□□ -1.75
CAST-228ENST00000509903 LCA10Q71F78 164 aa4.14□□□□□ -1.75
CAST-228ENST00000509903 SPTSSBQ8NFR3 76 aa4.14□□□□□ -1.75
CAST-228ENST00000509903 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CAST-228ENST00000509903 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
CAST-228ENST00000509903 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms