RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 K7ERJ3 54 aa7.75□□□□□ -1.17
TPM3-219ENST00000509409 HSD52Q0P140 79 aa7.75□□□□□ -1.17
TPM3-219ENST00000509409 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
TPM3-219ENST00000509409 VPS25Q9BRG1 176 aa7.73□□□□□ -1.17
TPM3-219ENST00000509409 SCGB1C2P0DMR2 95 aa7.71□□□□□ -1.18
TPM3-219ENST00000509409 UBE2V1Q13404 147 aa7.71□□□□□ -1.18
TPM3-219ENST00000509409 KRTAP4-7Q9BYR0 210 aa7.71□□□□□ -1.18
TPM3-219ENST00000509409 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
TPM3-219ENST00000509409 USH2AO75445 5202 aa7.7□□□□□ -1.18
TPM3-219ENST00000509409 HRES1P13985 223 aa7.69□□□□□ -1.18
TPM3-219ENST00000509409 RBM3P98179 157 aaKnown RBP7.68□□□□□ -1.18
TPM3-219ENST00000509409 C8orf87E5RJ46 101 aa7.67□□□□□ -1.18
TPM3-219ENST00000509409 PYY3Q5JQD4 70 aa7.67□□□□□ -1.18
TPM3-219ENST00000509409 DSCR8Q96T75 97 aa7.67□□□□□ -1.18
TPM3-219ENST00000509409 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
TPM3-219ENST00000509409 MT2AP02795 61 aa7.66□□□□□ -1.18
TPM3-219ENST00000509409 MPLKIPQ8TAP9 179 aa7.66□□□□□ -1.18
TPM3-219ENST00000509409 SSPOA2VEC9 5147 aa7.65□□□□□ -1.19
TPM3-219ENST00000509409 MTURNQ8N3F0 131 aa7.64□□□□□ -1.19
TPM3-219ENST00000509409 UQCR10Q9UDW1 63 aa7.64□□□□□ -1.19
TPM3-219ENST00000509409 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
TPM3-219ENST00000509409 BAALC-AS2P0C853 105 aa7.62□□□□□ -1.19
TPM3-219ENST00000509409 C9JAW5 83 aa7.61□□□□□ -1.19
TPM3-219ENST00000509409 J3KT08 172 aa7.61□□□□□ -1.19
TPM3-219ENST00000509409 MT1FP04733 61 aa7.6□□□□□ -1.19
TPM3-219ENST00000509409 C21orf62-AS1Q17RA5 79 aa7.6□□□□□ -1.19
TPM3-219ENST00000509409 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
TPM3-219ENST00000509409 TMA7Q9Y2S6 64 aaKnown RBP7.6□□□□□ -1.19
TPM3-219ENST00000509409 NDUFB1O75438 58 aa7.59□□□□□ -1.19
TPM3-219ENST00000509409 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
TPM3-219ENST00000509409 SPINK7P58062 85 aa7.58□□□□□ -1.2
TPM3-219ENST00000509409 LYRM7Q5U5X0 104 aa7.57□□□□□ -1.2
TPM3-219ENST00000509409 Q6ZQT0 140 aa7.56□□□□□ -1.2
TPM3-219ENST00000509409 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
TPM3-219ENST00000509409 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
TPM3-219ENST00000509409 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
TPM3-219ENST00000509409 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
TPM3-219ENST00000509409 C8orf17Q9NRJ1 99 aa7.51□□□□□ -1.21
TPM3-219ENST00000509409 JMJD7-PLA2G4BH0Y9G9 81 aa7.5□□□□□ -1.21
TPM3-219ENST00000509409 ATXN8Q156A1 80 aa7.5□□□□□ -1.21
TPM3-219ENST00000509409 A8MWP4 228 aa7.49□□□□□ -1.21
TPM3-219ENST00000509409 NAA38Q9BRA0 125 aaKnown RBP7.48□□□□□ -1.21
TPM3-219ENST00000509409 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
TPM3-219ENST00000509409 IGKV3D-7A0A0C4DH55 119 aa7.46□□□□□ -1.22
TPM3-219ENST00000509409 A0A1B0GW54 56 aa7.46□□□□□ -1.22
TPM3-219ENST00000509409 LOC110117498A0A087WWA1 95 aa7.45□□□□□ -1.22
TPM3-219ENST00000509409 PDE6GP18545 87 aa7.45□□□□□ -1.22
TPM3-219ENST00000509409 Q6ZVQ6 151 aa7.45□□□□□ -1.22
TPM3-219ENST00000509409 M0R143 59 aa7.44□□□□□ -1.22
TPM3-219ENST00000509409 NREPQ16612 68 aa7.44□□□□□ -1.22
TPM3-219ENST00000509409 C14orf132Q9NPU4 83 aa7.43□□□□□ -1.22
TPM3-219ENST00000509409 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
TPM3-219ENST00000509409 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
TPM3-219ENST00000509409 KRTAP4-2Q9BYR5 136 aa7.39□□□□□ -1.23
TPM3-219ENST00000509409 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
TPM3-219ENST00000509409 NDUFS5O43920 106 aa7.37□□□□□ -1.23
TPM3-219ENST00000509409 TMEM254Q8TBM7 123 aa7.37□□□□□ -1.23
TPM3-219ENST00000509409 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.23
TPM3-219ENST00000509409 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
TPM3-219ENST00000509409 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
TPM3-219ENST00000509409 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
TPM3-219ENST00000509409 K7EQZ3 153 aa7.3□□□□□ -1.24
TPM3-219ENST00000509409 BATFQ16520 125 aa7.3□□□□□ -1.24
TPM3-219ENST00000509409 KRTAP19-6Q3LI70 58 aa7.3□□□□□ -1.24
TPM3-219ENST00000509409 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
TPM3-219ENST00000509409 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
TPM3-219ENST00000509409 BPY2O14599 106 aa7.27□□□□□ -1.25
TPM3-219ENST00000509409 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
TPM3-219ENST00000509409 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
TPM3-219ENST00000509409 TSTD3H0UI37 97 aa7.23□□□□□ -1.25
TPM3-219ENST00000509409 H3BT86 120 aa7.23□□□□□ -1.25
TPM3-219ENST00000509409 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
TPM3-219ENST00000509409 LOC105371267A0A1B0GV96 52 aa7.22□□□□□ -1.25
TPM3-219ENST00000509409 SMIM6P0DI80 62 aa7.22□□□□□ -1.25
TPM3-219ENST00000509409 Q5W150 140 aa7.22□□□□□ -1.25
TPM3-219ENST00000509409 KRTAP4-11Q9BYQ6 195 aa7.21□□□□□ -1.26
TPM3-219ENST00000509409 C9orf118A6NHY6 69 aa7.2□□□□□ -1.26
TPM3-219ENST00000509409 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
TPM3-219ENST00000509409 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
TPM3-219ENST00000509409 Q8N9L7 120 aa7.18□□□□□ -1.26
TPM3-219ENST00000509409 A0A1W2PPM0 123 aa7.17□□□□□ -1.26
TPM3-219ENST00000509409 C4orf26Q17RF5 130 aa7.16□□□□□ -1.26
TPM3-219ENST00000509409 TAX1BP3O14907 124 aa7.15□□□□□ -1.26
TPM3-219ENST00000509409 CXCL6P80162 114 aa7.12□□□□□ -1.27
TPM3-219ENST00000509409 C5orf47Q569G3 176 aa7.1□□□□□ -1.27
TPM3-219ENST00000509409 FAM236AA0A1B0GUQ0 79 aa7.09□□□□□ -1.27
TPM3-219ENST00000509409 FAM236BA0A1B0GV22 79 aa7.09□□□□□ -1.27
TPM3-219ENST00000509409 KRTAP6-3Q3LI67 103 aa7.07□□□□□ -1.28
TPM3-219ENST00000509409 SPCS1Q9Y6A9 102 aa7.07□□□□□ -1.28
TPM3-219ENST00000509409 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
TPM3-219ENST00000509409 S4R3F8 94 aa7.04□□□□□ -1.28
TPM3-219ENST00000509409 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.29
TPM3-219ENST00000509409 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
TPM3-219ENST00000509409 KRTAP3-1Q9BYR8 98 aa7.01□□□□□ -1.29
TPM3-219ENST00000509409 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
TPM3-219ENST00000509409 A6NN06 94 aa6.97□□□□□ -1.29
TPM3-219ENST00000509409 Q5VV11 94 aa6.96□□□□□ -1.3
TPM3-219ENST00000509409 LCA10Q71F78 164 aa6.96□□□□□ -1.3
TPM3-219ENST00000509409 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
TPM3-219ENST00000509409 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms