RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 IMUPQ9GZP8 106 aa5□□□□□ -1.61
NEDD9-212ENST00000508800 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
NEDD9-212ENST00000508800 H3BMG7 143 aa4.99□□□□□ -1.61
NEDD9-212ENST00000508800 SNAPINO95295 136 aa4.99□□□□□ -1.61
NEDD9-212ENST00000508800 YPEL4Q96NS1 127 aa4.99□□□□□ -1.61
NEDD9-212ENST00000508800 TRBV7-4A0A0J9YYF1 115 aa4.98□□□□□ -1.61
NEDD9-212ENST00000508800 A0A1B0GVX0 72 aa4.98□□□□□ -1.61
NEDD9-212ENST00000508800 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
NEDD9-212ENST00000508800 PET117Q6UWS5 81 aa4.97□□□□□ -1.61
NEDD9-212ENST00000508800 SVBPQ8N300 66 aa4.96□□□□□ -1.62
NEDD9-212ENST00000508800 APOC3P02656 99 aa4.95□□□□□ -1.62
NEDD9-212ENST00000508800 NDUFA5Q16718 116 aa4.95□□□□□ -1.62
NEDD9-212ENST00000508800 DEFB116Q30KQ4 102 aa4.95□□□□□ -1.62
NEDD9-212ENST00000508800 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
NEDD9-212ENST00000508800 LYRM7Q5U5X0 104 aa4.93□□□□□ -1.62
NEDD9-212ENST00000508800 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
NEDD9-212ENST00000508800 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
NEDD9-212ENST00000508800 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
NEDD9-212ENST00000508800 ANKRD29Q8N6D5 301 aa4.9□□□□□ -1.63
NEDD9-212ENST00000508800 H0YGX0 51 aa4.88□□□□□ -1.63
NEDD9-212ENST00000508800 TRACP01848 142 aa4.88□□□□□ -1.63
NEDD9-212ENST00000508800 FABP2P12104 132 aa4.88□□□□□ -1.63
NEDD9-212ENST00000508800 J3KT08 172 aa4.87□□□□□ -1.63
NEDD9-212ENST00000508800 A0A1B0GX51 115 aa4.85□□□□□ -1.63
NEDD9-212ENST00000508800 NDUFB1O75438 58 aa4.84□□□□□ -1.63
NEDD9-212ENST00000508800 CCKP06307 115 aa4.84□□□□□ -1.63
NEDD9-212ENST00000508800 C5orf47Q569G3 176 aa4.84□□□□□ -1.63
NEDD9-212ENST00000508800 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
NEDD9-212ENST00000508800 KLKP1Q107X0 134 aa4.83□□□□□ -1.64
NEDD9-212ENST00000508800 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
NEDD9-212ENST00000508800 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
NEDD9-212ENST00000508800 H3BQ85 93 aa4.81□□□□□ -1.64
NEDD9-212ENST00000508800 SNRPEP62304 92 aaKnown RBP4.8□□□□□ -1.64
NEDD9-212ENST00000508800 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
NEDD9-212ENST00000508800 KRTDAPP60985 99 aa4.79□□□□□ -1.64
NEDD9-212ENST00000508800 C2orf91Q6ZV80 131 aa4.79□□□□□ -1.64
NEDD9-212ENST00000508800 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
NEDD9-212ENST00000508800 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
NEDD9-212ENST00000508800 PRR15Q8IV56 129 aa4.78□□□□□ -1.64
NEDD9-212ENST00000508800 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
NEDD9-212ENST00000508800 Q6ZVQ6 151 aa4.77□□□□□ -1.65
NEDD9-212ENST00000508800 ATOH7Q8N100 152 aa4.77□□□□□ -1.65
NEDD9-212ENST00000508800 A0A1B0GV72 72 aa4.75□□□□□ -1.65
NEDD9-212ENST00000508800 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
NEDD9-212ENST00000508800 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
NEDD9-212ENST00000508800 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H4GQ99525 98 aa4.74□□□□□ -1.65
NEDD9-212ENST00000508800 ORMDL1Q9P0S3 153 aa4.74□□□□□ -1.65
NEDD9-212ENST00000508800 TMEM256-PLSCR3K7ERE1 68 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BKO60814 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 DNAL4O96015 105 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BJP06899 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BOP23527 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BBP33778 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BDP58876 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BCP62807 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST2H2BEQ16778 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.73□□□□□ -1.65
NEDD9-212ENST00000508800 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BHQ93079 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BNQ99877 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 HIST1H2BMQ99879 126 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 VPS25Q9BRG1 176 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 S4R3F8 94 aa4.73□□□□□ -1.65
NEDD9-212ENST00000508800 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
NEDD9-212ENST00000508800 C4orf26Q17RF5 130 aa4.7□□□□□ -1.66
NEDD9-212ENST00000508800 A0A0B4J2C4 111 aa4.69□□□□□ -1.66
NEDD9-212ENST00000508800 LCA10Q71F78 164 aa4.69□□□□□ -1.66
NEDD9-212ENST00000508800 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
NEDD9-212ENST00000508800 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
NEDD9-212ENST00000508800 HSBP1L1C9JCN9 74 aa4.68□□□□□ -1.66
NEDD9-212ENST00000508800 MT1XP80297 61 aa4.68□□□□□ -1.66
NEDD9-212ENST00000508800 UBE2V1Q13404 147 aa4.67□□□□□ -1.66
NEDD9-212ENST00000508800 Q6ZQT0 140 aa4.67□□□□□ -1.66
NEDD9-212ENST00000508800 K7EQZ3 153 aa4.66□□□□□ -1.66
NEDD9-212ENST00000508800 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
NEDD9-212ENST00000508800 NDUFS5O43920 106 aa4.65□□□□□ -1.67
NEDD9-212ENST00000508800 RBM3P98179 157 aaKnown RBP4.65□□□□□ -1.67
NEDD9-212ENST00000508800 COA6Q5JTJ3 125 aaKnown RBP4.64□□□□□ -1.67
NEDD9-212ENST00000508800 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
NEDD9-212ENST00000508800 A0A1B0GW54 56 aa4.61□□□□□ -1.67
NEDD9-212ENST00000508800 hDV103S1A0JD37 113 aa4.61□□□□□ -1.67
NEDD9-212ENST00000508800 TRIAP1O43715 76 aa4.61□□□□□ -1.67
NEDD9-212ENST00000508800 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
NEDD9-212ENST00000508800 PRO1854Q9UHT4 67 aa4.61□□□□□ -1.67
NEDD9-212ENST00000508800 C9JAW5 83 aa4.6□□□□□ -1.67
NEDD9-212ENST00000508800 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
NEDD9-212ENST00000508800 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
NEDD9-212ENST00000508800 Q5W150 140 aa4.58□□□□□ -1.68
NEDD9-212ENST00000508800 PLAC4Q8WY50 150 aa4.58□□□□□ -1.68
NEDD9-212ENST00000508800 C1orf64Q8NEQ6 169 aa4.56□□□□□ -1.68
NEDD9-212ENST00000508800 DLEU1O43261 78 aa4.55□□□□□ -1.68
NEDD9-212ENST00000508800 COX6CP09669 75 aa4.55□□□□□ -1.68
NEDD9-212ENST00000508800 COX8AP10176 69 aa4.55□□□□□ -1.68
NEDD9-212ENST00000508800 A8MUN3 132 aa4.54□□□□□ -1.68
NEDD9-212ENST00000508800 HIST3H2BBQ8N257 126 aa4.53□□□□□ -1.68
NEDD9-212ENST00000508800 HIGD1BQ9P298 99 aa4.53□□□□□ -1.68
NEDD9-212ENST00000508800 PSMB2P49721 201 aa4.51□□□□□ -1.69
NEDD9-212ENST00000508800 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
NEDD9-212ENST00000508800 H0YAA0 97 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms