RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 A0A0U1RQV1 116 aa6.36□□□□□ -1.39
PROM1-207ENST00000508167 DEFB116Q30KQ4 102 aa6.36□□□□□ -1.39
PROM1-207ENST00000508167 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
PROM1-207ENST00000508167 ZCCHC13Q8WW36 166 aaKnown RBP6.35□□□□□ -1.39
PROM1-207ENST00000508167 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
PROM1-207ENST00000508167 PRR4Q16378 134 aa6.34□□□□□ -1.39
PROM1-207ENST00000508167 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
PROM1-207ENST00000508167 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.39
PROM1-207ENST00000508167 CD164Q04900 197 aa6.34□□□□□ -1.4
PROM1-207ENST00000508167 TMEM258P61165 79 aa6.33□□□□□ -1.4
PROM1-207ENST00000508167 HERC2O95714 4834 aa6.31□□□□□ -1.4
PROM1-207ENST00000508167 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
PROM1-207ENST00000508167 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
PROM1-207ENST00000508167 TNXBP22105 4242 aa6.29□□□□□ -1.4
PROM1-207ENST00000508167 PRR15Q8IV56 129 aa6.29□□□□□ -1.4
PROM1-207ENST00000508167 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
PROM1-207ENST00000508167 HCG22E2RYF7 251 aa6.29□□□□□ -1.4
PROM1-207ENST00000508167 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
PROM1-207ENST00000508167 A8MWP4 228 aa6.28□□□□□ -1.4
PROM1-207ENST00000508167 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
PROM1-207ENST00000508167 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
PROM1-207ENST00000508167 NDUFB1O75438 58 aa6.25□□□□□ -1.41
PROM1-207ENST00000508167 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
PROM1-207ENST00000508167 NOTCH2NLQ7Z3S9 236 aa6.24□□□□□ -1.41
PROM1-207ENST00000508167 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
PROM1-207ENST00000508167 IGLV7-46A0A075B6I9 117 aa6.24□□□□□ -1.41
PROM1-207ENST00000508167 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
PROM1-207ENST00000508167 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
PROM1-207ENST00000508167 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
PROM1-207ENST00000508167 Q5XG85 94 aa6.21□□□□□ -1.42
PROM1-207ENST00000508167 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
PROM1-207ENST00000508167 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
PROM1-207ENST00000508167 J3KT08 172 aa6.2□□□□□ -1.42
PROM1-207ENST00000508167 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
PROM1-207ENST00000508167 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
PROM1-207ENST00000508167 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
PROM1-207ENST00000508167 WFDC13Q8IUB5 93 aa6.19□□□□□ -1.42
PROM1-207ENST00000508167 NDUFC1O43677 76 aa6.18□□□□□ -1.42
PROM1-207ENST00000508167 CASC2Q6XLA1 102 aa6.17□□□□□ -1.42
PROM1-207ENST00000508167 FP248Q71RG6 208 aaPredicted RBP6.16□□□□□ -1.42
PROM1-207ENST00000508167 A0A1B0GVX0 72 aa6.15□□□□□ -1.42
PROM1-207ENST00000508167 C5orf47Q569G3 176 aa6.15□□□□□ -1.42
PROM1-207ENST00000508167 C8orf17Q9NRJ1 99 aa6.15□□□□□ -1.42
PROM1-207ENST00000508167 LINC00313P59037 77 aa6.13□□□□□ -1.43
PROM1-207ENST00000508167 SERP1Q9Y6X1 66 aa6.13□□□□□ -1.43
PROM1-207ENST00000508167 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
PROM1-207ENST00000508167 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
PROM1-207ENST00000508167 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
PROM1-207ENST00000508167 NDUFS5O43920 106 aa6.12□□□□□ -1.43
PROM1-207ENST00000508167 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
PROM1-207ENST00000508167 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.43
PROM1-207ENST00000508167 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.44
PROM1-207ENST00000508167 Q5W150 140 aa6.08□□□□□ -1.44
PROM1-207ENST00000508167 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
PROM1-207ENST00000508167 H0Y9P7 68 aa6.07□□□□□ -1.44
PROM1-207ENST00000508167 H3BPC8 53 aa6.05□□□□□ -1.44
PROM1-207ENST00000508167 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
PROM1-207ENST00000508167 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
PROM1-207ENST00000508167 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
PROM1-207ENST00000508167 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
PROM1-207ENST00000508167 LINC00208Q96KT6 92 aa6.03□□□□□ -1.44
PROM1-207ENST00000508167 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
PROM1-207ENST00000508167 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
PROM1-207ENST00000508167 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
PROM1-207ENST00000508167 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
PROM1-207ENST00000508167 XP32Q5T750 250 aa5.97□□□□□ -1.45
PROM1-207ENST00000508167 MP68P56378 58 aa5.97□□□□□ -1.45
PROM1-207ENST00000508167 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
PROM1-207ENST00000508167 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
PROM1-207ENST00000508167 HERC1Q15751 4861 aa5.95□□□□□ -1.46
PROM1-207ENST00000508167 PCOTHQ58A44 107 aa5.93□□□□□ -1.46
PROM1-207ENST00000508167 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
PROM1-207ENST00000508167 Q1T7F1 81 aa5.91□□□□□ -1.46
PROM1-207ENST00000508167 LPAP08519 4548 aa5.91□□□□□ -1.46
PROM1-207ENST00000508167 RPL37P61927 97 aaKnown RBP5.91□□□□□ -1.46
PROM1-207ENST00000508167 Q75L30 129 aa5.9□□□□□ -1.46
PROM1-207ENST00000508167 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
PROM1-207ENST00000508167 A8MUU9 505 aa5.88□□□□□ -1.47
PROM1-207ENST00000508167 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
PROM1-207ENST00000508167 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
PROM1-207ENST00000508167 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
PROM1-207ENST00000508167 HRES1P13985 223 aa5.86□□□□□ -1.47
PROM1-207ENST00000508167 COA5Q86WW8 74 aa5.84□□□□□ -1.47
PROM1-207ENST00000508167 MPLKIPQ8TAP9 179 aa5.82□□□□□ -1.48
PROM1-207ENST00000508167 LRP2P98164 4655 aa5.82□□□□□ -1.48
PROM1-207ENST00000508167 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
PROM1-207ENST00000508167 Q5VV11 94 aa5.79□□□□□ -1.48
PROM1-207ENST00000508167 SPINK7P58062 85 aa5.78□□□□□ -1.48
PROM1-207ENST00000508167 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
PROM1-207ENST00000508167 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
PROM1-207ENST00000508167 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
PROM1-207ENST00000508167 A8MU10 97 aa5.74□□□□□ -1.49
PROM1-207ENST00000508167 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
PROM1-207ENST00000508167 A8MUN3 132 aa5.72□□□□□ -1.49
PROM1-207ENST00000508167 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
PROM1-207ENST00000508167 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
PROM1-207ENST00000508167 PSPHP1O15172 72 aa5.7□□□□□ -1.5
PROM1-207ENST00000508167 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
PROM1-207ENST00000508167 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
PROM1-207ENST00000508167 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms