RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 Q6ZQT0 140 aa7.56□□□□□ -1.2
UBE2D3-221ENST00000507845 KRTAP4-11Q9BYQ6 195 aa7.56□□□□□ -1.2
UBE2D3-221ENST00000507845 VPS25Q9BRG1 176 aa7.55□□□□□ -1.2
UBE2D3-221ENST00000507845 PDE6GP18545 87 aa7.54□□□□□ -1.2
UBE2D3-221ENST00000507845 SS18L2Q9UHA2 77 aa7.54□□□□□ -1.2
UBE2D3-221ENST00000507845 A0A1B0GV90 55 aa7.52□□□□□ -1.21
UBE2D3-221ENST00000507845 F8W1H4 67 aa7.52□□□□□ -1.21
UBE2D3-221ENST00000507845 LPAP08519 4548 aa7.52□□□□□ -1.21
UBE2D3-221ENST00000507845 LRP2P98164 4655 aa7.49□□□□□ -1.21
UBE2D3-221ENST00000507845 C21orf62-AS1Q17RA5 79 aa7.49□□□□□ -1.21
UBE2D3-221ENST00000507845 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
UBE2D3-221ENST00000507845 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
UBE2D3-221ENST00000507845 Q96NJ1 140 aa7.48□□□□□ -1.21
UBE2D3-221ENST00000507845 A0A1B0GW54 56 aa7.47□□□□□ -1.21
UBE2D3-221ENST00000507845 ETDBQ3ZM63 59 aa7.46□□□□□ -1.22
UBE2D3-221ENST00000507845 LINC00472Q9H8W2 130 aa7.45□□□□□ -1.22
UBE2D3-221ENST00000507845 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
UBE2D3-221ENST00000507845 DEFB116Q30KQ4 102 aa7.41□□□□□ -1.22
UBE2D3-221ENST00000507845 IGKV4-1P06312 121 aa7.4□□□□□ -1.22
UBE2D3-221ENST00000507845 SIGMAR1Q99720 223 aa7.4□□□□□ -1.22
UBE2D3-221ENST00000507845 C9orf92A6NGG3 77 aa7.39□□□□□ -1.23
UBE2D3-221ENST00000507845 NREPQ16612 68 aa7.37□□□□□ -1.23
UBE2D3-221ENST00000507845 J3KT08 172 aa7.36□□□□□ -1.23
UBE2D3-221ENST00000507845 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
UBE2D3-221ENST00000507845 Q6ZVQ6 151 aa7.33□□□□□ -1.24
UBE2D3-221ENST00000507845 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
UBE2D3-221ENST00000507845 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
UBE2D3-221ENST00000507845 A0A1B0GVX0 72 aa7.31□□□□□ -1.24
UBE2D3-221ENST00000507845 DSCR10P59022 87 aa7.3□□□□□ -1.24
UBE2D3-221ENST00000507845 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
UBE2D3-221ENST00000507845 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
UBE2D3-221ENST00000507845 A8MWP4 228 aa7.29□□□□□ -1.24
UBE2D3-221ENST00000507845 UBL5Q9BZL1 73 aa7.29□□□□□ -1.24
UBE2D3-221ENST00000507845 LINC00313P59037 77 aa7.28□□□□□ -1.24
UBE2D3-221ENST00000507845 NOTCH2NLQ7Z3S9 236 aa7.28□□□□□ -1.24
UBE2D3-221ENST00000507845 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
UBE2D3-221ENST00000507845 BPY2O14599 106 aa7.27□□□□□ -1.25
UBE2D3-221ENST00000507845 NDUFB1O75438 58 aa7.27□□□□□ -1.25
UBE2D3-221ENST00000507845 C8orf87E5RJ46 101 aa7.26□□□□□ -1.25
UBE2D3-221ENST00000507845 RNF213Q63HN8 5207 aa7.26□□□□□ -1.25
UBE2D3-221ENST00000507845 FAM240AA0A1B0GVK7 77 aa7.25□□□□□ -1.25
UBE2D3-221ENST00000507845 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
UBE2D3-221ENST00000507845 ACYP1P07311 99 aa7.25□□□□□ -1.25
UBE2D3-221ENST00000507845 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
UBE2D3-221ENST00000507845 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-221ENST00000507845 PRR15Q8IV56 129 aa7.24□□□□□ -1.25
UBE2D3-221ENST00000507845 K7EQZ3 153 aa7.23□□□□□ -1.25
UBE2D3-221ENST00000507845 Q75L30 129 aa7.23□□□□□ -1.25
UBE2D3-221ENST00000507845 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
UBE2D3-221ENST00000507845 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
UBE2D3-221ENST00000507845 A8MUU9 505 aa7.21□□□□□ -1.26
UBE2D3-221ENST00000507845 PCOTHQ58A44 107 aa7.19□□□□□ -1.26
UBE2D3-221ENST00000507845 Q8N9L7 120 aa7.19□□□□□ -1.26
UBE2D3-221ENST00000507845 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
UBE2D3-221ENST00000507845 CXCL6P80162 114 aa7.17□□□□□ -1.26
UBE2D3-221ENST00000507845 J3QR89 54 aa7.16□□□□□ -1.26
UBE2D3-221ENST00000507845 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
UBE2D3-221ENST00000507845 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
UBE2D3-221ENST00000507845 Q8N9P0 234 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-221ENST00000507845 TMEM254Q8TBM7 123 aa7.13□□□□□ -1.27
UBE2D3-221ENST00000507845 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
UBE2D3-221ENST00000507845 ATP5EP2Q5VTU8 51 aa7.11□□□□□ -1.27
UBE2D3-221ENST00000507845 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-221ENST00000507845 MUC2Q02817 5179 aa7.11□□□□□ -1.27
UBE2D3-221ENST00000507845 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
UBE2D3-221ENST00000507845 WFDC13Q8IUB5 93 aa7.1□□□□□ -1.27
UBE2D3-221ENST00000507845 CASC2Q6XLA1 102 aa7.09□□□□□ -1.27
UBE2D3-221ENST00000507845 HCG22E2RYF7 251 aa7.08□□□□□ -1.28
UBE2D3-221ENST00000507845 K7ERU9 68 aa7.06□□□□□ -1.28
UBE2D3-221ENST00000507845 ZCCHC13Q8WW36 166 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-221ENST00000507845 NDUFS5O43920 106 aa7.03□□□□□ -1.28
UBE2D3-221ENST00000507845 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-221ENST00000507845 A0A087WVE0 104 aa6.97□□□□□ -1.29
UBE2D3-221ENST00000507845 Q5W150 140 aa6.96□□□□□ -1.3
UBE2D3-221ENST00000507845 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
UBE2D3-221ENST00000507845 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
UBE2D3-221ENST00000507845 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
UBE2D3-221ENST00000507845 TP53AIP1Q9HCN2 124 aa6.92□□□□□ -1.3
UBE2D3-221ENST00000507845 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
UBE2D3-221ENST00000507845 SPINK7P58062 85 aa6.91□□□□□ -1.3
UBE2D3-221ENST00000507845 HRES1P13985 223 aa6.89□□□□□ -1.31
UBE2D3-221ENST00000507845 IMUPQ9GZP8 106 aa6.88□□□□□ -1.31
UBE2D3-221ENST00000507845 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
UBE2D3-221ENST00000507845 IGKV2D-30A0A075B6S6 120 aa6.85□□□□□ -1.31
UBE2D3-221ENST00000507845 IGKV2-30P06310 120 aa6.85□□□□□ -1.31
UBE2D3-221ENST00000507845 C7orf65Q6ZTY9 151 aa6.84□□□□□ -1.31
UBE2D3-221ENST00000507845 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
UBE2D3-221ENST00000507845 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
UBE2D3-221ENST00000507845 UQCRQO14949 82 aa6.82□□□□□ -1.32
UBE2D3-221ENST00000507845 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
UBE2D3-221ENST00000507845 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
UBE2D3-221ENST00000507845 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
UBE2D3-221ENST00000507845 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
UBE2D3-221ENST00000507845 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
UBE2D3-221ENST00000507845 H0Y9P7 68 aa6.77□□□□□ -1.33
UBE2D3-221ENST00000507845 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
UBE2D3-221ENST00000507845 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
UBE2D3-221ENST00000507845 FAM236AA0A1B0GUQ0 79 aa6.76□□□□□ -1.33
UBE2D3-221ENST00000507845 FAM236BA0A1B0GV22 79 aa6.76□□□□□ -1.33
UBE2D3-221ENST00000507845 MT1HP80294 61 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms