RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DEFB116Q30KQ4 102 aa3.08□□□□□ -1.92
VCAN-207ENST00000507162 COX19Q49B96 90 aa3.08□□□□□ -1.92
VCAN-207ENST00000507162 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 PLNP26678 52 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 LYRM7Q5U5X0 104 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 LINC00575Q6W349 94 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 SMIM11BQ8TCY0 68 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 PMCHL2Q9BQD1 86 aa3.07□□□□□ -1.92
VCAN-207ENST00000507162 C5orf47Q569G3 176 aa3.06□□□□□ -1.92
VCAN-207ENST00000507162 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
VCAN-207ENST00000507162 HIST1H4GQ99525 98 aa3.06□□□□□ -1.92
VCAN-207ENST00000507162 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
VCAN-207ENST00000507162 DPM2O94777 84 aa3.05□□□□□ -1.92
VCAN-207ENST00000507162 C3orf79P0CE67 100 aa3.05□□□□□ -1.92
VCAN-207ENST00000507162 TIMM17BO60830 172 aa3.04□□□□□ -1.92
VCAN-207ENST00000507162 IGKCP01834 107 aa3.04□□□□□ -1.92
VCAN-207ENST00000507162 HSPB8Q9UJY1 196 aa3.04□□□□□ -1.92
VCAN-207ENST00000507162 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
VCAN-207ENST00000507162 CXCL6P80162 114 aa3.02□□□□□ -1.93
VCAN-207ENST00000507162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.02□□□□□ -1.93
VCAN-207ENST00000507162 CHCHD1Q96BP2 118 aaKnown RBP3.02□□□□□ -1.93
VCAN-207ENST00000507162 SNAPINO95295 136 aa3.01□□□□□ -1.93
VCAN-207ENST00000507162 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
VCAN-207ENST00000507162 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
VCAN-207ENST00000507162 V9GYY9 64 aa3.01□□□□□ -1.93
VCAN-207ENST00000507162 C8orf87E5RJ46 101 aa3□□□□□ -1.93
VCAN-207ENST00000507162 MT4P47944 62 aa3□□□□□ -1.93
VCAN-207ENST00000507162 KLKP1Q107X0 134 aa3□□□□□ -1.93
VCAN-207ENST00000507162 PPDPFLQ8WWR9 84 aa3□□□□□ -1.93
VCAN-207ENST00000507162 IGKV3D-7A0A0C4DH55 119 aa2.99□□□□□ -1.93
VCAN-207ENST00000507162 DSCR8Q96T75 97 aa2.99□□□□□ -1.93
VCAN-207ENST00000507162 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 LEPROTL1O95214 131 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 FABP4P15090 132 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 MT1XP80297 61 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 MUSTN1Q8IVN3 82 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 COPS9Q8WXC6 57 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 C12orf57Q99622 126 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 TTTY13Q9BZ97 58 aa2.98□□□□□ -1.93
VCAN-207ENST00000507162 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
VCAN-207ENST00000507162 LCA10Q71F78 164 aa2.97□□□□□ -1.93
VCAN-207ENST00000507162 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
VCAN-207ENST00000507162 LINC00472Q9H8W2 130 aa2.97□□□□□ -1.93
VCAN-207ENST00000507162 H3BMG7 143 aa2.96□□□□□ -1.94
VCAN-207ENST00000507162 S100A6P06703 90 aa2.96□□□□□ -1.94
VCAN-207ENST00000507162 IFITM1P13164 125 aa2.96□□□□□ -1.94
VCAN-207ENST00000507162 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
VCAN-207ENST00000507162 SCGB1D4Q6XE38 83 aa2.96□□□□□ -1.94
VCAN-207ENST00000507162 TRGC2P03986 189 aa2.95□□□□□ -1.94
VCAN-207ENST00000507162 PRR15Q8IV56 129 aa2.95□□□□□ -1.94
VCAN-207ENST00000507162 RAB37Q96AX2 223 aa2.95□□□□□ -1.94
VCAN-207ENST00000507162 RBM3P98179 157 aaKnown RBP2.94□□□□□ -1.94
VCAN-207ENST00000507162 TRBV7-4A0A0J9YYF1 115 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 TMEM218A2RU14 115 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 FABP2P12104 132 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 C4orf26Q17RF5 130 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 ANKRD29Q8N6D5 301 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 CRIPTQ9P021 101 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 S4R3F8 94 aa2.91□□□□□ -1.94
VCAN-207ENST00000507162 A0A1B0GV72 72 aa2.9□□□□□ -1.95
VCAN-207ENST00000507162 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
VCAN-207ENST00000507162 SNCGO76070 127 aa2.89□□□□□ -1.95
VCAN-207ENST00000507162 COA6Q5JTJ3 125 aaKnown RBP2.89□□□□□ -1.95
VCAN-207ENST00000507162 BVES-AS1Q5T3Y7 98 aa2.89□□□□□ -1.95
VCAN-207ENST00000507162 TRACP01848 142 aa2.88□□□□□ -1.95
VCAN-207ENST00000507162 NDUFB1O75438 58 aa2.87□□□□□ -1.95
VCAN-207ENST00000507162 CCKP06307 115 aa2.86□□□□□ -1.95
VCAN-207ENST00000507162 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
VCAN-207ENST00000507162 CEND1Q8N111 149 aa2.86□□□□□ -1.95
VCAN-207ENST00000507162 C8orf17Q9NRJ1 99 aa2.86□□□□□ -1.95
VCAN-207ENST00000507162 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
VCAN-207ENST00000507162 SYS1-DBNDD2H3BUS1 97 aa2.84□□□□□ -1.95
VCAN-207ENST00000507162 J3KT08 172 aa2.84□□□□□ -1.95
VCAN-207ENST00000507162 PDE6GP18545 87 aa2.84□□□□□ -1.95
VCAN-207ENST00000507162 C7orf65Q6ZTY9 151 aa2.84□□□□□ -1.95
VCAN-207ENST00000507162 VPS25Q9BRG1 176 aa2.84□□□□□ -1.95
VCAN-207ENST00000507162 NDUFS5O43920 106 aa2.83□□□□□ -1.96
VCAN-207ENST00000507162 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
VCAN-207ENST00000507162 LINC01545Q5VT33 79 aa2.81□□□□□ -1.96
VCAN-207ENST00000507162 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
VCAN-207ENST00000507162 SMIM26A0A096LP01 95 aa2.8□□□□□ -1.96
VCAN-207ENST00000507162 A8MUN3 132 aa2.8□□□□□ -1.96
VCAN-207ENST00000507162 H0YGX0 51 aa2.8□□□□□ -1.96
VCAN-207ENST00000507162 PSPHP1O15172 72 aa2.78□□□□□ -1.96
VCAN-207ENST00000507162 Q5W150 140 aa2.78□□□□□ -1.96
VCAN-207ENST00000507162 C1orf64Q8NEQ6 169 aa2.78□□□□□ -1.96
VCAN-207ENST00000507162 MRPL34Q9BQ48 92 aaKnown RBP2.78□□□□□ -1.96
VCAN-207ENST00000507162 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
VCAN-207ENST00000507162 K7EQZ3 153 aa2.76□□□□□ -1.97
VCAN-207ENST00000507162 CLLU1Q5K131 121 aa2.76□□□□□ -1.97
VCAN-207ENST00000507162 TMEM254Q8TBM7 123 aa2.76□□□□□ -1.97
VCAN-207ENST00000507162 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
VCAN-207ENST00000507162 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
VCAN-207ENST00000507162 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
VCAN-207ENST00000507162 APOC3P02656 99 aa2.74□□□□□ -1.97
VCAN-207ENST00000507162 PSMB2P49721 201 aa2.74□□□□□ -1.97
VCAN-207ENST00000507162 ATOH7Q8N100 152 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms