RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 UNC79Q9P2D8 2635 aa5.83□□□□□ -1.48
KLHL3-207ENST00000506491 TEP1Q99973 2627 aaKnown RBP5.81□□□□□ -1.48
KLHL3-207ENST00000506491 LRBAP50851 2863 aa5.79□□□□□ -1.48
KLHL3-207ENST00000506491 WDFY3Q8IZQ1 3526 aa5.79□□□□□ -1.48
KLHL3-207ENST00000506491 GCN1Q92616 2671 aaKnown RBP5.78□□□□□ -1.48
KLHL3-207ENST00000506491 FRYLO94915 3013 aa5.78□□□□□ -1.48
KLHL3-207ENST00000506491 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
KLHL3-207ENST00000506491 CFAP47Q6ZTR5 3102 aa5.77□□□□□ -1.49
KLHL3-207ENST00000506491 COL6A5A8TX70 2615 aa5.74□□□□□ -1.49
KLHL3-207ENST00000506491 ASPMQ8IZT6 3477 aa5.74□□□□□ -1.49
KLHL3-207ENST00000506491 DSPP15924 2871 aaKnown RBP5.72□□□□□ -1.49
KLHL3-207ENST00000506491 SETXQ7Z333 2677 aaKnown RBP5.71□□□□□ -1.5
KLHL3-207ENST00000506491 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
KLHL3-207ENST00000506491 CSMD1Q96PZ7 3565 aa5.69□□□□□ -1.5
KLHL3-207ENST00000506491 BAHCC1Q9P281 2608 aa5.69□□□□□ -1.5
KLHL3-207ENST00000506491 NBEAL2Q6ZNJ1 2754 aa5.68□□□□□ -1.5
KLHL3-207ENST00000506491 NOTCH1P46531 2555 aa5.68□□□□□ -1.5
KLHL3-207ENST00000506491 NBEAQ8NFP9 2946 aa5.68□□□□□ -1.5
KLHL3-207ENST00000506491 EYSQ5T1H1 3165 aa5.67□□□□□ -1.5
KLHL3-207ENST00000506491 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
KLHL3-207ENST00000506491 ZFHX4Q86UP3 3567 aa5.66□□□□□ -1.5
KLHL3-207ENST00000506491 BOD1L1Q8NFC6 3051 aa5.66□□□□□ -1.5
KLHL3-207ENST00000506491 ITPR2Q14571 2701 aa5.65□□□□□ -1.51
KLHL3-207ENST00000506491 ZNF292O60281 2723 aa5.6□□□□□ -1.51
KLHL3-207ENST00000506491 NSD1Q96L73 2696 aaPredicted RBP5.56□□□□□ -1.52
KLHL3-207ENST00000506491 ADGRG4Q8IZF6 3080 aa5.56□□□□□ -1.52
KLHL3-207ENST00000506491 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
KLHL3-207ENST00000506491 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
KLHL3-207ENST00000506491 LAMA5O15230 3695 aa5.54□□□□□ -1.52
KLHL3-207ENST00000506491 LOC400499M0QZD8 3231 aa5.53□□□□□ -1.52
KLHL3-207ENST00000506491 DMXL2Q8TDJ6 3036 aa5.52□□□□□ -1.53
KLHL3-207ENST00000506491 APCP25054 2843 aa5.5□□□□□ -1.53
KLHL3-207ENST00000506491 MAP1AP78559 2803 aaPredicted RBP5.5□□□□□ -1.53
KLHL3-207ENST00000506491 TACC2O95359 2948 aa5.49□□□□□ -1.53
KLHL3-207ENST00000506491 SMG1Q96Q15 3661 aaKnown RBP5.49□□□□□ -1.53
KLHL3-207ENST00000506491 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
KLHL3-207ENST00000506491 ASH1LQ9NR48 2969 aaKnown RBP5.47□□□□□ -1.53
KLHL3-207ENST00000506491 CRYBG3Q68DQ2 2970 aa5.46□□□□□ -1.53
KLHL3-207ENST00000506491 UBR5O95071 2799 aaPredicted RBP5.46□□□□□ -1.54
KLHL3-207ENST00000506491 ATMQ13315 3056 aa5.44□□□□□ -1.54
KLHL3-207ENST00000506491 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
KLHL3-207ENST00000506491 DMDP11532 3685 aa5.44□□□□□ -1.54
KLHL3-207ENST00000506491 ITPR1Q14643 2758 aa5.42□□□□□ -1.54
KLHL3-207ENST00000506491 TNRC18O15417 2968 aaPredicted RBP5.37□□□□□ -1.55
KLHL3-207ENST00000506491 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
KLHL3-207ENST00000506491 UTP20O75691 2785 aaKnown RBP5.36□□□□□ -1.55
KLHL3-207ENST00000506491 COL12A1Q99715 3063 aa5.36□□□□□ -1.55
KLHL3-207ENST00000506491 RELNP78509 3460 aa5.35□□□□□ -1.55
KLHL3-207ENST00000506491 DMXL1Q9Y485 3027 aa5.35□□□□□ -1.55
KLHL3-207ENST00000506491 HIVEP1P15822 2718 aa5.35□□□□□ -1.55
KLHL3-207ENST00000506491 SVEP1Q4LDE5 3571 aa5.33□□□□□ -1.56
KLHL3-207ENST00000506491 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
KLHL3-207ENST00000506491 SPENQ96T58 3664 aaKnown RBP5.28□□□□□ -1.56
KLHL3-207ENST00000506491 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
KLHL3-207ENST00000506491 NBPF19A0A087WUL8 3843 aa5.25□□□□□ -1.57
KLHL3-207ENST00000506491 TENM4Q6N022 2769 aa5.23□□□□□ -1.57
KLHL3-207ENST00000506491 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
KLHL3-207ENST00000506491 ZFHX3Q15911 3703 aa5.16□□□□□ -1.58
KLHL3-207ENST00000506491 TENM2Q9NT68 2774 aa5.13□□□□□ -1.59
KLHL3-207ENST00000506491 TENM1Q9UKZ4 2725 aa5.11□□□□□ -1.59
KLHL3-207ENST00000506491 CELSR2Q9HCU4 2923 aa5.11□□□□□ -1.59
KLHL3-207ENST00000506491 TGP01266 2768 aa5.11□□□□□ -1.59
KLHL3-207ENST00000506491 BSNQ9UPA5 3926 aa5.11□□□□□ -1.59
KLHL3-207ENST00000506491 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
KLHL3-207ENST00000506491 CELSR1Q9NYQ6 3014 aa5.09□□□□□ -1.59
KLHL3-207ENST00000506491 FBN2P35556 2912 aa5.09□□□□□ -1.59
KLHL3-207ENST00000506491 ANK3Q12955 4377 aaKnown RBP5.08□□□□□ -1.6
KLHL3-207ENST00000506491 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
KLHL3-207ENST00000506491 INE1O15225 51 aa5.06□□□□□ -1.6
KLHL3-207ENST00000506491 CUBNO60494 3623 aa5.05□□□□□ -1.6
KLHL3-207ENST00000506491 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
KLHL3-207ENST00000506491 AKAP9Q99996 3911 aa5.05□□□□□ -1.6
KLHL3-207ENST00000506491 DCHS2Q6V1P9 2916 aa5.04□□□□□ -1.6
KLHL3-207ENST00000506491 NIPBLQ6KC79 2804 aaeCLIP5.02□□□□□ -1.61
KLHL3-207ENST00000506491 TENM3Q9P273 2699 aa5.01□□□□□ -1.61
KLHL3-207ENST00000506491 ZANQ9Y493 2812 aa4.99□□□□□ -1.61
KLHL3-207ENST00000506491 FLNCQ14315 2725 aa4.99□□□□□ -1.61
KLHL3-207ENST00000506491 NF1P21359 2839 aa4.98□□□□□ -1.61
KLHL3-207ENST00000506491 MXRA5Q9NR99 2828 aa4.94□□□□□ -1.62
KLHL3-207ENST00000506491 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
KLHL3-207ENST00000506491 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
KLHL3-207ENST00000506491 MT1HL1P0DM35 61 aa4.9□□□□□ -1.62
KLHL3-207ENST00000506491 MUC3AQ02505 3323 aa4.9□□□□□ -1.63
KLHL3-207ENST00000506491 CSMD2Q7Z408 3487 aa4.89□□□□□ -1.63
KLHL3-207ENST00000506491 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
KLHL3-207ENST00000506491 KRTAP3-2Q9BYR7 98 aa4.88□□□□□ -1.63
KLHL3-207ENST00000506491 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
KLHL3-207ENST00000506491 PDZD2O15018 2839 aa4.83□□□□□ -1.64
KLHL3-207ENST00000506491 CSMD3Q7Z407 3707 aa4.82□□□□□ -1.64
KLHL3-207ENST00000506491 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
KLHL3-207ENST00000506491 TRRAPQ9Y4A5 3859 aa4.81□□□□□ -1.64
KLHL3-207ENST00000506491 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
KLHL3-207ENST00000506491 ALMS1Q8TCU4 4167 aa4.8□□□□□ -1.64
KLHL3-207ENST00000506491 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
KLHL3-207ENST00000506491 PKD1L1Q8TDX9 2849 aa4.75□□□□□ -1.65
KLHL3-207ENST00000506491 VWFP04275 2813 aa4.73□□□□□ -1.65
KLHL3-207ENST00000506491 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
KLHL3-207ENST00000506491 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
KLHL3-207ENST00000506491 KRTAP10-4P60372 401 aaPredicted RBP4.61□□□□□ -1.67
KLHL3-207ENST00000506491 DNAH10Q8IVF4 4471 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 1878.4 ms