RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 SMIM6P0DI80 62 aa8.41□□□□□ -1.06
PDLIM7-215ENST00000506161 MPLKIPQ8TAP9 179 aa8.41□□□□□ -1.06
PDLIM7-215ENST00000506161 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
PDLIM7-215ENST00000506161 FCGBPQ9Y6R7 5405 aaPredicted RBP8.38□□□□□ -1.07
PDLIM7-215ENST00000506161 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
PDLIM7-215ENST00000506161 DSCR8Q96T75 97 aa8.36□□□□□ -1.07
PDLIM7-215ENST00000506161 Q6ZQT0 140 aa8.35□□□□□ -1.07
PDLIM7-215ENST00000506161 C9JAW5 83 aa8.33□□□□□ -1.08
PDLIM7-215ENST00000506161 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
PDLIM7-215ENST00000506161 MT2AP02795 61 aa8.32□□□□□ -1.08
PDLIM7-215ENST00000506161 M0R143 59 aa8.3□□□□□ -1.08
PDLIM7-215ENST00000506161 ATXN8Q156A1 80 aa8.3□□□□□ -1.08
PDLIM7-215ENST00000506161 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
PDLIM7-215ENST00000506161 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
PDLIM7-215ENST00000506161 C14orf132Q9NPU4 83 aa8.28□□□□□ -1.08
PDLIM7-215ENST00000506161 LOC110117498A0A087WWA1 95 aa8.27□□□□□ -1.09
PDLIM7-215ENST00000506161 MT1FP04733 61 aa8.27□□□□□ -1.09
PDLIM7-215ENST00000506161 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
PDLIM7-215ENST00000506161 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
PDLIM7-215ENST00000506161 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
PDLIM7-215ENST00000506161 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
PDLIM7-215ENST00000506161 SYNE2Q8WXH0 6885 aaKnown RBP8.24□□□□□ -1.09
PDLIM7-215ENST00000506161 J3KT08 172 aa8.24□□□□□ -1.09
PDLIM7-215ENST00000506161 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
PDLIM7-215ENST00000506161 JMJD7-PLA2G4BH0Y9G9 81 aa8.23□□□□□ -1.09
PDLIM7-215ENST00000506161 A8MWP4 228 aa8.22□□□□□ -1.09
PDLIM7-215ENST00000506161 SPINK7P58062 85 aa8.22□□□□□ -1.09
PDLIM7-215ENST00000506161 BATFQ16520 125 aa8.22□□□□□ -1.09
PDLIM7-215ENST00000506161 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
PDLIM7-215ENST00000506161 MACF1Q9UPN3 7388 aaKnown RBP8.2□□□□□ -1.1
PDLIM7-215ENST00000506161 LCE2BO14633 110 aa8.2□□□□□ -1.1
PDLIM7-215ENST00000506161 MTURNQ8N3F0 131 aa8.2□□□□□ -1.1
PDLIM7-215ENST00000506161 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
PDLIM7-215ENST00000506161 KRTAP9-3Q9BYQ3 159 aa8.18□□□□□ -1.1
PDLIM7-215ENST00000506161 TSTD3H0UI37 97 aa8.16□□□□□ -1.1
PDLIM7-215ENST00000506161 TAX1BP3O14907 124 aa8.16□□□□□ -1.1
PDLIM7-215ENST00000506161 NDUFB1O75438 58 aa8.16□□□□□ -1.1
PDLIM7-215ENST00000506161 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
PDLIM7-215ENST00000506161 A0A1B0GW54 56 aa8.15□□□□□ -1.1
PDLIM7-215ENST00000506161 PRR15Q8IV56 129 aa8.15□□□□□ -1.1
PDLIM7-215ENST00000506161 Q6ZVQ6 151 aa8.14□□□□□ -1.11
PDLIM7-215ENST00000506161 PDE6GP18545 87 aa8.13□□□□□ -1.11
PDLIM7-215ENST00000506161 C9orf118A6NHY6 69 aa8.12□□□□□ -1.11
PDLIM7-215ENST00000506161 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
PDLIM7-215ENST00000506161 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
PDLIM7-215ENST00000506161 K7EQZ3 153 aa8.11□□□□□ -1.11
PDLIM7-215ENST00000506161 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
PDLIM7-215ENST00000506161 NREPQ16612 68 aa8.11□□□□□ -1.11
PDLIM7-215ENST00000506161 A0A1W2PPM0 123 aa8.1□□□□□ -1.11
PDLIM7-215ENST00000506161 LYRM7Q5U5X0 104 aa8.1□□□□□ -1.11
PDLIM7-215ENST00000506161 H3BT86 120 aa8.08□□□□□ -1.12
PDLIM7-215ENST00000506161 MRPL34Q9BQ48 92 aaKnown RBP8.08□□□□□ -1.12
PDLIM7-215ENST00000506161 TMEM254Q8TBM7 123 aa8.07□□□□□ -1.12
PDLIM7-215ENST00000506161 LINC00846Q9NV44 126 aa8.06□□□□□ -1.12
PDLIM7-215ENST00000506161 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
PDLIM7-215ENST00000506161 Q5W150 140 aa8.02□□□□□ -1.13
PDLIM7-215ENST00000506161 Q8N9L7 120 aa8.02□□□□□ -1.13
PDLIM7-215ENST00000506161 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
PDLIM7-215ENST00000506161 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
PDLIM7-215ENST00000506161 NDUFS5O43920 106 aa7.97□□□□□ -1.13
PDLIM7-215ENST00000506161 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
PDLIM7-215ENST00000506161 BPY2O14599 106 aa7.96□□□□□ -1.14
PDLIM7-215ENST00000506161 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
PDLIM7-215ENST00000506161 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
PDLIM7-215ENST00000506161 IGKV2D-30A0A075B6S6 120 aa7.93□□□□□ -1.14
PDLIM7-215ENST00000506161 IGKV2-30P06310 120 aa7.93□□□□□ -1.14
PDLIM7-215ENST00000506161 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
PDLIM7-215ENST00000506161 HCG22E2RYF7 251 aa7.89□□□□□ -1.15
PDLIM7-215ENST00000506161 CASC2Q6XLA1 102 aa7.89□□□□□ -1.15
PDLIM7-215ENST00000506161 COL5A1-AS1Q5SY13 56 aa7.85□□□□□ -1.15
PDLIM7-215ENST00000506161 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
PDLIM7-215ENST00000506161 K7EP34 96 aa7.83□□□□□ -1.16
PDLIM7-215ENST00000506161 C4orf26Q17RF5 130 aa7.83□□□□□ -1.16
PDLIM7-215ENST00000506161 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
PDLIM7-215ENST00000506161 NEBP20929 6669 aa7.79□□□□□ -1.16
PDLIM7-215ENST00000506161 CXCL6P80162 114 aa7.75□□□□□ -1.17
PDLIM7-215ENST00000506161 UBL5Q9BZL1 73 aa7.75□□□□□ -1.17
PDLIM7-215ENST00000506161 KRTAP20-1Q3LI63 56 aa7.74□□□□□ -1.17
PDLIM7-215ENST00000506161 A0A1B0GV90 55 aa7.73□□□□□ -1.17
PDLIM7-215ENST00000506161 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
PDLIM7-215ENST00000506161 ETDBQ3ZM63 59 aa7.67□□□□□ -1.18
PDLIM7-215ENST00000506161 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PDLIM7-215ENST00000506161 LCA10Q71F78 164 aa7.63□□□□□ -1.19
PDLIM7-215ENST00000506161 C1orf64Q8NEQ6 169 aa7.63□□□□□ -1.19
PDLIM7-215ENST00000506161 GTF2H5Q6ZYL4 71 aa7.62□□□□□ -1.19
PDLIM7-215ENST00000506161 F8W1H4 67 aa7.61□□□□□ -1.19
PDLIM7-215ENST00000506161 S4R3F8 94 aa7.61□□□□□ -1.19
PDLIM7-215ENST00000506161 A0A087WVE0 104 aa7.59□□□□□ -1.19
PDLIM7-215ENST00000506161 MT1BP07438 61 aa7.59□□□□□ -1.19
PDLIM7-215ENST00000506161 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
PDLIM7-215ENST00000506161 TP53AIP1Q9HCN2 124 aa7.55□□□□□ -1.2
PDLIM7-215ENST00000506161 FAM236AA0A1B0GUQ0 79 aa7.53□□□□□ -1.2
PDLIM7-215ENST00000506161 FAM236BA0A1B0GV22 79 aa7.53□□□□□ -1.2
PDLIM7-215ENST00000506161 CYP4F30PQ9H0H9 118 aa7.52□□□□□ -1.21
PDLIM7-215ENST00000506161 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
PDLIM7-215ENST00000506161 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
PDLIM7-215ENST00000506161 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
PDLIM7-215ENST00000506161 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
PDLIM7-215ENST00000506161 TRAV22A0A0B4J277 110 aa7.45□□□□□ -1.22
PDLIM7-215ENST00000506161 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms