RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
POLR2J3-211ENST00000506060 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.32
POLR2J3-211ENST00000506060 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
POLR2J3-211ENST00000506060 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
POLR2J3-211ENST00000506060 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
POLR2J3-211ENST00000506060 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
POLR2J3-211ENST00000506060 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
POLR2J3-211ENST00000506060 LINC00313P59037 77 aa6.82□□□□□ -1.32
POLR2J3-211ENST00000506060 KRTAP29-1A8MX34 341 aaPredicted RBP6.81□□□□□ -1.32
POLR2J3-211ENST00000506060 TMEM254Q8TBM7 123 aa6.81□□□□□ -1.32
POLR2J3-211ENST00000506060 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
POLR2J3-211ENST00000506060 UQCRQO14949 82 aa6.79□□□□□ -1.32
POLR2J3-211ENST00000506060 COX7CP15954 63 aa6.79□□□□□ -1.32
POLR2J3-211ENST00000506060 MRPL34Q9BQ48 92 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-211ENST00000506060 TP53AIP1Q9HCN2 124 aa6.78□□□□□ -1.32
POLR2J3-211ENST00000506060 EPPK1P58107 5090 aaKnown RBP6.78□□□□□ -1.32
POLR2J3-211ENST00000506060 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
POLR2J3-211ENST00000506060 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
POLR2J3-211ENST00000506060 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
POLR2J3-211ENST00000506060 DMBT1Q9UGM3 2413 aaPredicted RBP6.76□□□□□ -1.33
POLR2J3-211ENST00000506060 NDUFS5O43920 106 aa6.75□□□□□ -1.33
POLR2J3-211ENST00000506060 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
POLR2J3-211ENST00000506060 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
POLR2J3-211ENST00000506060 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
POLR2J3-211ENST00000506060 J3QL48 77 aa6.71□□□□□ -1.34
POLR2J3-211ENST00000506060 MP68P56378 58 aa6.71□□□□□ -1.34
POLR2J3-211ENST00000506060 RETNLBQ9BQ08 111 aa6.71□□□□□ -1.34
POLR2J3-211ENST00000506060 H3BPC8 53 aa6.69□□□□□ -1.34
POLR2J3-211ENST00000506060 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
POLR2J3-211ENST00000506060 CCDC179H3BU77 68 aa6.68□□□□□ -1.34
POLR2J3-211ENST00000506060 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
POLR2J3-211ENST00000506060 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
POLR2J3-211ENST00000506060 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
POLR2J3-211ENST00000506060 BIRC6Q9NR09 4857 aa6.67□□□□□ -1.34
POLR2J3-211ENST00000506060 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
POLR2J3-211ENST00000506060 H0Y9P7 68 aa6.66□□□□□ -1.34
POLR2J3-211ENST00000506060 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
POLR2J3-211ENST00000506060 NDUFC1O43677 76 aa6.64□□□□□ -1.35
POLR2J3-211ENST00000506060 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
POLR2J3-211ENST00000506060 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
POLR2J3-211ENST00000506060 PRR4Q16378 134 aa6.63□□□□□ -1.35
POLR2J3-211ENST00000506060 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
POLR2J3-211ENST00000506060 A0A0U1RQV1 116 aa6.61□□□□□ -1.35
POLR2J3-211ENST00000506060 TNXBP22105 4242 aa6.6□□□□□ -1.35
POLR2J3-211ENST00000506060 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
POLR2J3-211ENST00000506060 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
POLR2J3-211ENST00000506060 SNURFQ9Y675 71 aa6.6□□□□□ -1.35
POLR2J3-211ENST00000506060 A8MUU9 505 aa6.59□□□□□ -1.35
POLR2J3-211ENST00000506060 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
POLR2J3-211ENST00000506060 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
POLR2J3-211ENST00000506060 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
POLR2J3-211ENST00000506060 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
POLR2J3-211ENST00000506060 Q75L30 129 aa6.57□□□□□ -1.36
POLR2J3-211ENST00000506060 HERC2O95714 4834 aa6.57□□□□□ -1.36
POLR2J3-211ENST00000506060 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
POLR2J3-211ENST00000506060 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
POLR2J3-211ENST00000506060 Q5W150 140 aa6.54□□□□□ -1.36
POLR2J3-211ENST00000506060 TMEM258P61165 79 aa6.53□□□□□ -1.36
POLR2J3-211ENST00000506060 ATP11AUNQ6ZP68 121 aa6.52□□□□□ -1.37
POLR2J3-211ENST00000506060 H7BZZ5 65 aa6.51□□□□□ -1.37
POLR2J3-211ENST00000506060 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
POLR2J3-211ENST00000506060 XP32Q5T750 250 aa6.5□□□□□ -1.37
POLR2J3-211ENST00000506060 IGKV2-30P06310 120 aa6.49□□□□□ -1.37
POLR2J3-211ENST00000506060 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
POLR2J3-211ENST00000506060 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
POLR2J3-211ENST00000506060 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
POLR2J3-211ENST00000506060 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
POLR2J3-211ENST00000506060 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.38
POLR2J3-211ENST00000506060 FAM236DA0A1B0GTK5 79 aa6.45□□□□□ -1.38
POLR2J3-211ENST00000506060 FAM236CP0DP71 79 aa6.45□□□□□ -1.38
POLR2J3-211ENST00000506060 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
POLR2J3-211ENST00000506060 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
POLR2J3-211ENST00000506060 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
POLR2J3-211ENST00000506060 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
POLR2J3-211ENST00000506060 SPINK7P58062 85 aa6.37□□□□□ -1.39
POLR2J3-211ENST00000506060 HRES1P13985 223 aa6.36□□□□□ -1.39
POLR2J3-211ENST00000506060 SERP1Q9Y6X1 66 aa6.33□□□□□ -1.4
POLR2J3-211ENST00000506060 A8MUN3 132 aa6.3□□□□□ -1.4
POLR2J3-211ENST00000506060 ACYP2P14621 99 aa6.3□□□□□ -1.4
POLR2J3-211ENST00000506060 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
POLR2J3-211ENST00000506060 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
POLR2J3-211ENST00000506060 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
POLR2J3-211ENST00000506060 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
POLR2J3-211ENST00000506060 COA5Q86WW8 74 aa6.22□□□□□ -1.41
POLR2J3-211ENST00000506060 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
POLR2J3-211ENST00000506060 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
POLR2J3-211ENST00000506060 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
POLR2J3-211ENST00000506060 SMIM26A0A096LP01 95 aa6.17□□□□□ -1.42
POLR2J3-211ENST00000506060 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
POLR2J3-211ENST00000506060 LRP2P98164 4655 aa6.15□□□□□ -1.43
POLR2J3-211ENST00000506060 LPAP08519 4548 aa6.13□□□□□ -1.43
POLR2J3-211ENST00000506060 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
POLR2J3-211ENST00000506060 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
POLR2J3-211ENST00000506060 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
POLR2J3-211ENST00000506060 V9GYY9 64 aa6.1□□□□□ -1.43
POLR2J3-211ENST00000506060 HERC1Q15751 4861 aa6.08□□□□□ -1.44
POLR2J3-211ENST00000506060 S4R3F8 94 aa6.05□□□□□ -1.44
POLR2J3-211ENST00000506060 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
POLR2J3-211ENST00000506060 Q1T7F1 81 aa6.03□□□□□ -1.44
POLR2J3-211ENST00000506060 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms