RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 NCOR2Q9Y618 2525 aa2.52□□□□□ -2.01
CHD1-204ENST00000505982 A0A096LNI7 61 aa2.52□□□□□ -2.01
CHD1-204ENST00000505982 SPRR1BP22528 89 aa2.52□□□□□ -2.01
CHD1-204ENST00000505982 TPRXLQ17RH7 258 aa2.52□□□□□ -2.01
CHD1-204ENST00000505982 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
CHD1-204ENST00000505982 PIEZO1Q92508 2521 aa2.51□□□□□ -2.01
CHD1-204ENST00000505982 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
CHD1-204ENST00000505982 DOPEY1Q5JWR5 2465 aa2.51□□□□□ -2.01
CHD1-204ENST00000505982 DMDP11532 3685 aa2.51□□□□□ -2.01
CHD1-204ENST00000505982 SMG1Q96Q15 3661 aaKnown RBP2.51□□□□□ -2.01
CHD1-204ENST00000505982 FN1P02751 2386 aaKnown RBP2.51□□□□□ -2.01
CHD1-204ENST00000505982 PTPN13Q12923 2485 aa2.5□□□□□ -2.01
CHD1-204ENST00000505982 TTC28Q96AY4 2481 aa2.5□□□□□ -2.01
CHD1-204ENST00000505982 MAP1AP78559 2803 aaPredicted RBP2.5□□□□□ -2.01
CHD1-204ENST00000505982 MRPL34Q9BQ48 92 aaKnown RBP2.5□□□□□ -2.01
CHD1-204ENST00000505982 JMJD1CQ15652 2540 aa2.5□□□□□ -2.01
CHD1-204ENST00000505982 ZFHX4Q86UP3 3567 aa2.49□□□□□ -2.01
CHD1-204ENST00000505982 A0A1B0GU69 56 aa2.49□□□□□ -2.01
CHD1-204ENST00000505982 ACYP2P14621 99 aa2.49□□□□□ -2.01
CHD1-204ENST00000505982 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
CHD1-204ENST00000505982 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
CHD1-204ENST00000505982 SETXQ7Z333 2677 aaKnown RBP2.49□□□□□ -2.01
CHD1-204ENST00000505982 BSNQ9UPA5 3926 aa2.48□□□□□ -2.01
CHD1-204ENST00000505982 CHD6Q8TD26 2715 aa2.48□□□□□ -2.01
CHD1-204ENST00000505982 ASH1LQ9NR48 2969 aaKnown RBP2.47□□□□□ -2.01
CHD1-204ENST00000505982 UBE2DNLQ8IWF7 75 aa2.47□□□□□ -2.01
CHD1-204ENST00000505982 Q96NJ1 140 aa2.47□□□□□ -2.01
CHD1-204ENST00000505982 MYO9AB2RTY4 2548 aa2.47□□□□□ -2.01
CHD1-204ENST00000505982 KMT2BQ9UMN6 2715 aaPredicted RBP2.47□□□□□ -2.01
CHD1-204ENST00000505982 LRRK2Q5S007 2527 aa2.46□□□□□ -2.01
CHD1-204ENST00000505982 NAV2Q8IVL1 2488 aa2.46□□□□□ -2.02
CHD1-204ENST00000505982 MIR22HGQ0VDD5 57 aa2.46□□□□□ -2.02
CHD1-204ENST00000505982 SMR3AQ99954 134 aa2.46□□□□□ -2.02
CHD1-204ENST00000505982 RETNLBQ9BQ08 111 aa2.46□□□□□ -2.02
CHD1-204ENST00000505982 CRYBG3Q68DQ2 2970 aa2.46□□□□□ -2.02
CHD1-204ENST00000505982 COL12A1Q99715 3063 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 ASPMQ8IZT6 3477 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 J3QKU1 62 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 UQCR11O14957 56 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 SPACA4Q8TDM5 124 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 DMAC1Q96GE9 116 aa2.45□□□□□ -2.02
CHD1-204ENST00000505982 SPATA8Q6RVD6 105 aa2.44□□□□□ -2.02
CHD1-204ENST00000505982 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
CHD1-204ENST00000505982 SONP18583 2426 aaKnown RBP2.44□□□□□ -2.02
CHD1-204ENST00000505982 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
CHD1-204ENST00000505982 USP9XQ93008 2570 aaPredicted RBP2.43□□□□□ -2.02
CHD1-204ENST00000505982 ITPR1Q14643 2758 aa2.43□□□□□ -2.02
CHD1-204ENST00000505982 USP9YO00507 2555 aaPredicted RBP2.43□□□□□ -2.02
CHD1-204ENST00000505982 MAST4O15021 2626 aa2.42□□□□□ -2.02
CHD1-204ENST00000505982 ITPR3Q14573 2671 aa2.42□□□□□ -2.02
CHD1-204ENST00000505982 GCN1Q92616 2671 aaKnown RBP2.42□□□□□ -2.02
CHD1-204ENST00000505982 FAM208BQ5VWN6 2430 aa2.41□□□□□ -2.02
CHD1-204ENST00000505982 POLQO75417 2590 aa2.41□□□□□ -2.02
CHD1-204ENST00000505982 EPG5Q9HCE0 2579 aa2.41□□□□□ -2.02
CHD1-204ENST00000505982 K7EIL1 84 aa2.41□□□□□ -2.02
CHD1-204ENST00000505982 CSAG1Q6PB30 78 aa2.41□□□□□ -2.02
CHD1-204ENST00000505982 FASNP49327 2511 aaKnown RBP2.41□□□□□ -2.02
CHD1-204ENST00000505982 ZNF462Q96JM2 2506 aa2.41□□□□□ -2.02
CHD1-204ENST00000505982 TEX15Q9BXT5 2789 aa2.4□□□□□ -2.02
CHD1-204ENST00000505982 UTP20O75691 2785 aaKnown RBP2.4□□□□□ -2.03
CHD1-204ENST00000505982 FLNAP21333 2647 aaKnown RBP2.39□□□□□ -2.03
CHD1-204ENST00000505982 ZFYVE26Q68DK2 2539 aa2.39□□□□□ -2.03
CHD1-204ENST00000505982 APCP25054 2843 aa2.39□□□□□ -2.03
CHD1-204ENST00000505982 MXRA5Q9NR99 2828 aa2.39□□□□□ -2.03
CHD1-204ENST00000505982 ZANQ9Y493 2812 aa2.39□□□□□ -2.03
CHD1-204ENST00000505982 ACACBO00763 2458 aa2.39□□□□□ -2.03
CHD1-204ENST00000505982 FBN2P35556 2912 aa2.38□□□□□ -2.03
CHD1-204ENST00000505982 SPTBN4Q9H254 2564 aa2.38□□□□□ -2.03
CHD1-204ENST00000505982 MUC3AQ02505 3323 aa2.38□□□□□ -2.03
CHD1-204ENST00000505982 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
CHD1-204ENST00000505982 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
CHD1-204ENST00000505982 Q6ZRN7 208 aaPredicted RBP2.38□□□□□ -2.03
CHD1-204ENST00000505982 ZFHX3Q15911 3703 aa2.37□□□□□ -2.03
CHD1-204ENST00000505982 RELNP78509 3460 aa2.37□□□□□ -2.03
CHD1-204ENST00000505982 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
CHD1-204ENST00000505982 C1orf134Q5TEV5 83 aa2.36□□□□□ -2.03
CHD1-204ENST00000505982 FBN1P35555 2871 aaKnown RBP2.35□□□□□ -2.03
CHD1-204ENST00000505982 CCDC168Q8NDH2 2452 aa2.35□□□□□ -2.03
CHD1-204ENST00000505982 LAMA5O15230 3695 aa2.35□□□□□ -2.03
CHD1-204ENST00000505982 ABCA12Q86UK0 2595 aa2.35□□□□□ -2.03
CHD1-204ENST00000505982 LY6G6CO95867 125 aa2.35□□□□□ -2.03
CHD1-204ENST00000505982 SPINK1P00995 79 aa2.35□□□□□ -2.03
CHD1-204ENST00000505982 APLNQ9ULZ1 77 aa2.35□□□□□ -2.03
CHD1-204ENST00000505982 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.03
CHD1-204ENST00000505982 NUPR2A6NF83 97 aa2.34□□□□□ -2.03
CHD1-204ENST00000505982 SSBP3-AS1Q7Z2R9 100 aa2.34□□□□□ -2.03
CHD1-204ENST00000505982 MYO18BQ8IUG5 2567 aa2.34□□□□□ -2.04
CHD1-204ENST00000505982 SETD2Q9BYW2 2564 aaPredicted RBP2.34□□□□□ -2.04
CHD1-204ENST00000505982 IGSF10Q6WRI0 2623 aa2.33□□□□□ -2.04
CHD1-204ENST00000505982 TEP1Q99973 2627 aaKnown RBP2.33□□□□□ -2.04
CHD1-204ENST00000505982 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
CHD1-204ENST00000505982 CFAP46Q8IYW2 2715 aa2.33□□□□□ -2.04
CHD1-204ENST00000505982 F8P00451 2351 aa2.33□□□□□ -2.04
CHD1-204ENST00000505982 TENM2Q9NT68 2774 aa2.33□□□□□ -2.04
CHD1-204ENST00000505982 SVEP1Q4LDE5 3571 aa2.33□□□□□ -2.04
CHD1-204ENST00000505982 UBR5O95071 2799 aaPredicted RBP2.32□□□□□ -2.04
CHD1-204ENST00000505982 A0A087WTM6 91 aa2.32□□□□□ -2.04
CHD1-204ENST00000505982 MTORP42345 2549 aa2.32□□□□□ -2.04
CHD1-204ENST00000505982 ACANP16112 2415 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms