RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
COL4A5-208ENST00000505728 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
COL4A5-208ENST00000505728 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
COL4A5-208ENST00000505728 NDUFB1O75438 58 aa4.71□□□□□ -1.66
COL4A5-208ENST00000505728 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.66
COL4A5-208ENST00000505728 Q5XG85 94 aa4.71□□□□□ -1.66
COL4A5-208ENST00000505728 PRR15Q8IV56 129 aa4.71□□□□□ -1.66
COL4A5-208ENST00000505728 Q96NJ1 140 aa4.71□□□□□ -1.66
COL4A5-208ENST00000505728 HCG22E2RYF7 251 aa4.7□□□□□ -1.66
COL4A5-208ENST00000505728 CCDC179H3BU77 68 aa4.7□□□□□ -1.66
COL4A5-208ENST00000505728 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
COL4A5-208ENST00000505728 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
COL4A5-208ENST00000505728 FAT3Q8TDW7 4589 aa4.69□□□□□ -1.66
COL4A5-208ENST00000505728 FAM229AH3BQW9 127 aa4.68□□□□□ -1.66
COL4A5-208ENST00000505728 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
COL4A5-208ENST00000505728 SPAG11AQ6PDA7 123 aa4.67□□□□□ -1.66
COL4A5-208ENST00000505728 LIMD2Q9BT23 127 aa4.67□□□□□ -1.66
COL4A5-208ENST00000505728 PKHD1L1Q86WI1 4243 aa4.67□□□□□ -1.66
COL4A5-208ENST00000505728 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
COL4A5-208ENST00000505728 SPINK1P00995 79 aa4.66□□□□□ -1.66
COL4A5-208ENST00000505728 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
COL4A5-208ENST00000505728 A0A1B0GVX0 72 aa4.65□□□□□ -1.67
COL4A5-208ENST00000505728 RPS29P62273 56 aaKnown RBP4.65□□□□□ -1.67
COL4A5-208ENST00000505728 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
COL4A5-208ENST00000505728 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
COL4A5-208ENST00000505728 PRR26Q8N8Z3 221 aa4.65□□□□□ -1.67
COL4A5-208ENST00000505728 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
COL4A5-208ENST00000505728 C8orf17Q9NRJ1 99 aa4.64□□□□□ -1.67
COL4A5-208ENST00000505728 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
COL4A5-208ENST00000505728 C1orf195Q5TG92 126 aa4.63□□□□□ -1.67
COL4A5-208ENST00000505728 LINC00304Q8N9R0 145 aa4.63□□□□□ -1.67
COL4A5-208ENST00000505728 IGHV6-1A0A0B4J1U7 121 aa4.62□□□□□ -1.67
COL4A5-208ENST00000505728 hDV103S1A0JD37 113 aa4.62□□□□□ -1.67
COL4A5-208ENST00000505728 C8orf87E5RJ46 101 aa4.62□□□□□ -1.67
COL4A5-208ENST00000505728 XP32Q5T750 250 aa4.62□□□□□ -1.67
COL4A5-208ENST00000505728 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
COL4A5-208ENST00000505728 C20orf197Q8N268 126 aa4.61□□□□□ -1.67
COL4A5-208ENST00000505728 TMEM254Q8TBM7 123 aa4.61□□□□□ -1.67
COL4A5-208ENST00000505728 KLKP1Q107X0 134 aa4.6□□□□□ -1.67
COL4A5-208ENST00000505728 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
COL4A5-208ENST00000505728 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
COL4A5-208ENST00000505728 A0A0U1RQV1 116 aa4.58□□□□□ -1.68
COL4A5-208ENST00000505728 LINC00313P59037 77 aa4.58□□□□□ -1.68
COL4A5-208ENST00000505728 H3BPC8 53 aa4.57□□□□□ -1.68
COL4A5-208ENST00000505728 NDUFC1O43677 76 aa4.57□□□□□ -1.68
COL4A5-208ENST00000505728 NOTCH2NLQ7Z3S9 236 aa4.57□□□□□ -1.68
COL4A5-208ENST00000505728 MP68P56378 58 aa4.56□□□□□ -1.68
COL4A5-208ENST00000505728 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
COL4A5-208ENST00000505728 TMEM258P61165 79 aa4.55□□□□□ -1.68
COL4A5-208ENST00000505728 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
COL4A5-208ENST00000505728 SNURFQ9Y675 71 aa4.55□□□□□ -1.68
COL4A5-208ENST00000505728 OXTP01178 125 aa4.54□□□□□ -1.68
COL4A5-208ENST00000505728 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
COL4A5-208ENST00000505728 TNXBP22105 4242 aa4.53□□□□□ -1.68
COL4A5-208ENST00000505728 H0Y9P7 68 aa4.53□□□□□ -1.68
COL4A5-208ENST00000505728 H7BZZ5 65 aa4.53□□□□□ -1.68
COL4A5-208ENST00000505728 NDUFS5O43920 106 aa4.53□□□□□ -1.68
COL4A5-208ENST00000505728 LRP2P98164 4655 aa4.52□□□□□ -1.69
COL4A5-208ENST00000505728 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
COL4A5-208ENST00000505728 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
COL4A5-208ENST00000505728 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
COL4A5-208ENST00000505728 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
COL4A5-208ENST00000505728 LINC00208Q96KT6 92 aa4.5□□□□□ -1.69
COL4A5-208ENST00000505728 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
COL4A5-208ENST00000505728 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
COL4A5-208ENST00000505728 FAM236DA0A1B0GTK5 79 aa4.48□□□□□ -1.69
COL4A5-208ENST00000505728 FAM236CP0DP71 79 aa4.48□□□□□ -1.69
COL4A5-208ENST00000505728 C1orf64Q8NEQ6 169 aa4.48□□□□□ -1.69
COL4A5-208ENST00000505728 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
COL4A5-208ENST00000505728 KRTAP13-3Q3SY46 172 aa4.46□□□□□ -1.7
COL4A5-208ENST00000505728 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
COL4A5-208ENST00000505728 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
COL4A5-208ENST00000505728 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
COL4A5-208ENST00000505728 Q5W150 140 aa4.45□□□□□ -1.7
COL4A5-208ENST00000505728 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
COL4A5-208ENST00000505728 RETNLBQ9BQ08 111 aa4.43□□□□□ -1.7
COL4A5-208ENST00000505728 A8MUU9 505 aa4.42□□□□□ -1.7
COL4A5-208ENST00000505728 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
COL4A5-208ENST00000505728 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
COL4A5-208ENST00000505728 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
COL4A5-208ENST00000505728 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.71
COL4A5-208ENST00000505728 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
COL4A5-208ENST00000505728 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
COL4A5-208ENST00000505728 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
COL4A5-208ENST00000505728 LPAP08519 4548 aa4.4□□□□□ -1.71
COL4A5-208ENST00000505728 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
COL4A5-208ENST00000505728 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
COL4A5-208ENST00000505728 Q75L30 129 aa4.37□□□□□ -1.71
COL4A5-208ENST00000505728 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
COL4A5-208ENST00000505728 PRR4Q16378 134 aa4.35□□□□□ -1.71
COL4A5-208ENST00000505728 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
COL4A5-208ENST00000505728 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
COL4A5-208ENST00000505728 HRES1P13985 223 aa4.33□□□□□ -1.72
COL4A5-208ENST00000505728 C7orf65Q6ZTY9 151 aa4.33□□□□□ -1.72
COL4A5-208ENST00000505728 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
COL4A5-208ENST00000505728 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
COL4A5-208ENST00000505728 ATP11AUNQ6ZP68 121 aa4.31□□□□□ -1.72
COL4A5-208ENST00000505728 ACYP2P14621 99 aa4.29□□□□□ -1.72
COL4A5-208ENST00000505728 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
COL4A5-208ENST00000505728 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms