RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 LINC00472Q9H8W2 130 aa2.85□□□□□ -1.95
MATR3-211ENST00000505625 KALRNO60229 2985 aa2.84□□□□□ -1.95
MATR3-211ENST00000505625 ASH1LQ9NR48 2969 aaKnown RBP2.84□□□□□ -1.95
MATR3-211ENST00000505625 OCR1Q9BZK8 76 aa2.84□□□□□ -1.96
MATR3-211ENST00000505625 FLNAP21333 2647 aaKnown RBP2.83□□□□□ -1.96
MATR3-211ENST00000505625 KRTAP11-1Q8IUC1 163 aa2.83□□□□□ -1.96
MATR3-211ENST00000505625 HELZ2Q9BYK8 2649 aaKnown RBP2.82□□□□□ -1.96
MATR3-211ENST00000505625 STAB1Q9NY15 2570 aa2.81□□□□□ -1.96
MATR3-211ENST00000505625 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
MATR3-211ENST00000505625 NBEAQ8NFP9 2946 aa2.81□□□□□ -1.96
MATR3-211ENST00000505625 ANK3Q12955 4377 aaKnown RBP2.81□□□□□ -1.96
MATR3-211ENST00000505625 ASB16-AS1Q495Z4 193 aa2.81□□□□□ -1.96
MATR3-211ENST00000505625 ZNF469Q96JG9 3925 aaPredicted RBP2.8□□□□□ -1.96
MATR3-211ENST00000505625 XP32Q5T750 250 aa2.8□□□□□ -1.96
MATR3-211ENST00000505625 TEX15Q9BXT5 2789 aa2.8□□□□□ -1.96
MATR3-211ENST00000505625 Q5VV11 94 aa2.8□□□□□ -1.96
MATR3-211ENST00000505625 SPRR1AP35321 89 aa2.79□□□□□ -1.96
MATR3-211ENST00000505625 ZZEF1O43149 2961 aa2.78□□□□□ -1.96
MATR3-211ENST00000505625 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
MATR3-211ENST00000505625 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
MATR3-211ENST00000505625 Q6ZRN7 208 aaPredicted RBP2.77□□□□□ -1.97
MATR3-211ENST00000505625 IGSF10Q6WRI0 2623 aa2.77□□□□□ -1.97
MATR3-211ENST00000505625 ZNF292O60281 2723 aa2.76□□□□□ -1.97
MATR3-211ENST00000505625 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
MATR3-211ENST00000505625 A6NN06 94 aa2.76□□□□□ -1.97
MATR3-211ENST00000505625 CELSR1Q9NYQ6 3014 aa2.75□□□□□ -1.97
MATR3-211ENST00000505625 KRTAP16-1A8MUX0 517 aa2.74□□□□□ -1.97
MATR3-211ENST00000505625 KRTAP29-1A8MX34 341 aaPredicted RBP2.74□□□□□ -1.97
MATR3-211ENST00000505625 ITPR2Q14571 2701 aa2.74□□□□□ -1.97
MATR3-211ENST00000505625 TPRXLQ17RH7 258 aa2.73□□□□□ -1.97
MATR3-211ENST00000505625 MAST4O15021 2626 aa2.73□□□□□ -1.97
MATR3-211ENST00000505625 FLNBO75369 2602 aaKnown RBP2.73□□□□□ -1.97
MATR3-211ENST00000505625 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
MATR3-211ENST00000505625 TEP1Q99973 2627 aaKnown RBP2.73□□□□□ -1.97
MATR3-211ENST00000505625 CMYA5Q8N3K9 4069 aa2.72□□□□□ -1.97
MATR3-211ENST00000505625 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
MATR3-211ENST00000505625 MAP1AP78559 2803 aaPredicted RBP2.72□□□□□ -1.97
MATR3-211ENST00000505625 GCN1Q92616 2671 aaKnown RBP2.71□□□□□ -1.98
MATR3-211ENST00000505625 ATRQ13535 2644 aa2.71□□□□□ -1.98
MATR3-211ENST00000505625 H0YAA0 97 aa2.71□□□□□ -1.98
MATR3-211ENST00000505625 CELSR2Q9HCU4 2923 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 TRRAPQ9Y4A5 3859 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 TACC2O95359 2948 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 CENPEQ02224 2701 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 UNC79Q9P2D8 2635 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 NOTCH1P46531 2555 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 COL6A5A8TX70 2615 aa2.7□□□□□ -1.98
MATR3-211ENST00000505625 NBEAL1Q6ZS30 2694 aa2.68□□□□□ -1.98
MATR3-211ENST00000505625 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
MATR3-211ENST00000505625 Q5XG85 94 aa2.67□□□□□ -1.98
MATR3-211ENST00000505625 CHD6Q8TD26 2715 aa2.66□□□□□ -1.98
MATR3-211ENST00000505625 HRNRQ86YZ3 2850 aaPredicted RBP2.66□□□□□ -1.98
MATR3-211ENST00000505625 NSD1Q96L73 2696 aaPredicted RBP2.66□□□□□ -1.98
MATR3-211ENST00000505625 SETXQ7Z333 2677 aaKnown RBP2.65□□□□□ -1.98
MATR3-211ENST00000505625 HUWE1Q7Z6Z7 4374 aaKnown RBP2.65□□□□□ -1.98
MATR3-211ENST00000505625 ANK2Q01484 3957 aa2.65□□□□□ -1.99
MATR3-211ENST00000505625 CSMD3Q7Z407 3707 aa2.64□□□□□ -1.99
MATR3-211ENST00000505625 DCHS2Q6V1P9 2916 aa2.64□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP13-3Q3SY46 172 aa2.62□□□□□ -1.99
MATR3-211ENST00000505625 CYSTM1Q9H1C7 97 aa2.62□□□□□ -1.99
MATR3-211ENST00000505625 FBN2P35556 2912 aa2.61□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP10-6P60371 365 aaPredicted RBP2.61□□□□□ -1.99
MATR3-211ENST00000505625 APCP25054 2843 aa2.6□□□□□ -1.99
MATR3-211ENST00000505625 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP7-1Q8IUC3 87 aa2.6□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP3-3Q9BYR6 98 aa2.6□□□□□ -1.99
MATR3-211ENST00000505625 KRTAP3-2Q9BYR7 98 aa2.6□□□□□ -1.99
MATR3-211ENST00000505625 NBEAL2Q6ZNJ1 2754 aa2.59□□□□□ -2
MATR3-211ENST00000505625 ITPR1Q14643 2758 aa2.58□□□□□ -2
MATR3-211ENST00000505625 TENM4Q6N022 2769 aa2.58□□□□□ -2
MATR3-211ENST00000505625 LYSTQ99698 3801 aa2.58□□□□□ -2
MATR3-211ENST00000505625 STAB2Q8WWQ8 2551 aa2.58□□□□□ -2
MATR3-211ENST00000505625 ALMS1Q8TCU4 4167 aa2.57□□□□□ -2
MATR3-211ENST00000505625 HIVEP1P15822 2718 aa2.57□□□□□ -2
MATR3-211ENST00000505625 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
MATR3-211ENST00000505625 NIPBLQ6KC79 2804 aaeCLIP2.56□□□□□ -2
MATR3-211ENST00000505625 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
MATR3-211ENST00000505625 FRAS1Q86XX4 4008 aa2.53□□□□□ -2
MATR3-211ENST00000505625 FBN1P35555 2871 aaKnown RBP2.52□□□□□ -2.01
MATR3-211ENST00000505625 PDZD2O15018 2839 aa2.52□□□□□ -2.01
MATR3-211ENST00000505625 UBR5O95071 2799 aaPredicted RBP2.52□□□□□ -2.01
MATR3-211ENST00000505625 FLNCQ14315 2725 aa2.51□□□□□ -2.01
MATR3-211ENST00000505625 KMT2AQ03164 3969 aa2.49□□□□□ -2.01
MATR3-211ENST00000505625 NF1P21359 2839 aa2.49□□□□□ -2.01
MATR3-211ENST00000505625 KRTAP4-5Q9BYR2 181 aa2.48□□□□□ -2.01
MATR3-211ENST00000505625 ZANQ9Y493 2812 aa2.48□□□□□ -2.01
MATR3-211ENST00000505625 KRTAP8-1Q8IUC2 63 aa2.47□□□□□ -2.01
MATR3-211ENST00000505625 OTOGQ6ZRI0 2925 aa2.46□□□□□ -2.01
MATR3-211ENST00000505625 TENM2Q9NT68 2774 aa2.46□□□□□ -2.02
MATR3-211ENST00000505625 DNAH9Q9NYC9 4486 aa2.46□□□□□ -2.02
MATR3-211ENST00000505625 DNAH7Q8WXX0 4024 aa2.45□□□□□ -2.02
MATR3-211ENST00000505625 TENM1Q9UKZ4 2725 aa2.45□□□□□ -2.02
MATR3-211ENST00000505625 DNAH3Q8TD57 4116 aa2.45□□□□□ -2.02
MATR3-211ENST00000505625 PRKDCP78527 4128 aaKnown RBP2.44□□□□□ -2.02
MATR3-211ENST00000505625 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
MATR3-211ENST00000505625 DNAH10Q8IVF4 4471 aa2.43□□□□□ -2.02
MATR3-211ENST00000505625 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
MATR3-211ENST00000505625 MXRA5Q9NR99 2828 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms