RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 Q5XG85 94 aa8.98□□□□□ -0.97
SNCAIP-207ENST00000504884 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
SNCAIP-207ENST00000504884 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
SNCAIP-207ENST00000504884 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.97
SNCAIP-207ENST00000504884 PLA2G1BP04054 148 aaKnown RBP8.95□□□□□ -0.98
SNCAIP-207ENST00000504884 A0A1B0GVY2 172 aa8.94□□□□□ -0.98
SNCAIP-207ENST00000504884 NOTCH2NLQ7Z3S9 236 aa8.94□□□□□ -0.98
SNCAIP-207ENST00000504884 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
SNCAIP-207ENST00000504884 NDUFS5O43920 106 aa8.93□□□□□ -0.98
SNCAIP-207ENST00000504884 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
SNCAIP-207ENST00000504884 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
SNCAIP-207ENST00000504884 TYMSOSQ8TAI1 123 aa8.9□□□□□ -0.98
SNCAIP-207ENST00000504884 LIMD2Q9BT23 127 aa8.9□□□□□ -0.98
SNCAIP-207ENST00000504884 C1orf195Q5TG92 126 aa8.89□□□□□ -0.99
SNCAIP-207ENST00000504884 PKHD1P08F94 4074 aa8.89□□□□□ -0.99
SNCAIP-207ENST00000504884 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
SNCAIP-207ENST00000504884 CYP4F30PQ9H0H9 118 aa8.88□□□□□ -0.99
SNCAIP-207ENST00000504884 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
SNCAIP-207ENST00000504884 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
SNCAIP-207ENST00000504884 SPINK1P00995 79 aa8.85□□□□□ -0.99
SNCAIP-207ENST00000504884 LINC00313P59037 77 aa8.85□□□□□ -0.99
SNCAIP-207ENST00000504884 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
SNCAIP-207ENST00000504884 PRR4Q16378 134 aa8.81□□□□□ -1
SNCAIP-207ENST00000504884 PRR26Q8N8Z3 221 aa8.8□□□□□ -1
SNCAIP-207ENST00000504884 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
SNCAIP-207ENST00000504884 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
SNCAIP-207ENST00000504884 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
SNCAIP-207ENST00000504884 RYR2Q92736 4967 aa8.78□□□□□ -1
SNCAIP-207ENST00000504884 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
SNCAIP-207ENST00000504884 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1.01
SNCAIP-207ENST00000504884 LINC00304Q8N9R0 145 aa8.77□□□□□ -1.01
SNCAIP-207ENST00000504884 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
SNCAIP-207ENST00000504884 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
SNCAIP-207ENST00000504884 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
SNCAIP-207ENST00000504884 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
SNCAIP-207ENST00000504884 Q5W150 140 aa8.75□□□□□ -1.01
SNCAIP-207ENST00000504884 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
SNCAIP-207ENST00000504884 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
SNCAIP-207ENST00000504884 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
SNCAIP-207ENST00000504884 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
SNCAIP-207ENST00000504884 KMT2CQ8NEZ4 4911 aaKnown RBP8.68□□□□□ -1.02
SNCAIP-207ENST00000504884 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
SNCAIP-207ENST00000504884 FAT1Q14517 4588 aa8.68□□□□□ -1.02
SNCAIP-207ENST00000504884 Q1T7F1 81 aa8.63□□□□□ -1.03
SNCAIP-207ENST00000504884 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
SNCAIP-207ENST00000504884 COA5Q86WW8 74 aa8.6□□□□□ -1.03
SNCAIP-207ENST00000504884 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
SNCAIP-207ENST00000504884 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
SNCAIP-207ENST00000504884 V9GYY9 64 aa8.57□□□□□ -1.04
SNCAIP-207ENST00000504884 HRES1P13985 223 aa8.54□□□□□ -1.04
SNCAIP-207ENST00000504884 ACYP2P14621 99 aa8.51□□□□□ -1.05
SNCAIP-207ENST00000504884 Q5VSD8 79 aa8.51□□□□□ -1.05
SNCAIP-207ENST00000504884 SVIPQ8NHG7 77 aa8.51□□□□□ -1.05
SNCAIP-207ENST00000504884 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
SNCAIP-207ENST00000504884 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
SNCAIP-207ENST00000504884 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
SNCAIP-207ENST00000504884 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
SNCAIP-207ENST00000504884 C20orf166-AS1Q96NR2 134 aa8.46□□□□□ -1.06
SNCAIP-207ENST00000504884 A8MUU9 505 aa8.45□□□□□ -1.06
SNCAIP-207ENST00000504884 PSPHP1O15172 72 aa8.45□□□□□ -1.06
SNCAIP-207ENST00000504884 Q8N1X5 172 aa8.45□□□□□ -1.06
SNCAIP-207ENST00000504884 HSPG2P98160 4391 aa8.44□□□□□ -1.06
SNCAIP-207ENST00000504884 RYR3Q15413 4870 aa8.44□□□□□ -1.06
SNCAIP-207ENST00000504884 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
SNCAIP-207ENST00000504884 A8MUN3 132 aa8.41□□□□□ -1.06
SNCAIP-207ENST00000504884 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
SNCAIP-207ENST00000504884 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
SNCAIP-207ENST00000504884 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
SNCAIP-207ENST00000504884 RYR1P21817 5038 aa8.38□□□□□ -1.07
SNCAIP-207ENST00000504884 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
SNCAIP-207ENST00000504884 PRR15LQ9BU68 103 aa8.37□□□□□ -1.07
SNCAIP-207ENST00000504884 PRO0628Q9UI54 55 aa8.37□□□□□ -1.07
SNCAIP-207ENST00000504884 TNXBP22105 4242 aa8.37□□□□□ -1.07
SNCAIP-207ENST00000504884 Q5VV11 94 aa8.36□□□□□ -1.07
SNCAIP-207ENST00000504884 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-207ENST00000504884 Q75L30 129 aa8.33□□□□□ -1.08
SNCAIP-207ENST00000504884 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
SNCAIP-207ENST00000504884 FAT3Q8TDW7 4589 aa8.31□□□□□ -1.08
SNCAIP-207ENST00000504884 SPINK7P58062 85 aa8.25□□□□□ -1.09
SNCAIP-207ENST00000504884 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
SNCAIP-207ENST00000504884 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
SNCAIP-207ENST00000504884 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
SNCAIP-207ENST00000504884 ATP11AUNQ6ZP68 121 aa8.21□□□□□ -1.1
SNCAIP-207ENST00000504884 A6NED7 52 aa8.19□□□□□ -1.1
SNCAIP-207ENST00000504884 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
SNCAIP-207ENST00000504884 A0A1B0GU69 56 aa8.15□□□□□ -1.11
SNCAIP-207ENST00000504884 EPPK1P58107 5090 aaKnown RBP8.14□□□□□ -1.11
SNCAIP-207ENST00000504884 XP32Q5T750 250 aa8.14□□□□□ -1.11
SNCAIP-207ENST00000504884 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
SNCAIP-207ENST00000504884 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
SNCAIP-207ENST00000504884 LCA10Q71F78 164 aa8.11□□□□□ -1.11
SNCAIP-207ENST00000504884 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
SNCAIP-207ENST00000504884 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
SNCAIP-207ENST00000504884 MYCBP2O75592 4640 aa8.09□□□□□ -1.11
SNCAIP-207ENST00000504884 A8MU10 97 aa8.08□□□□□ -1.12
SNCAIP-207ENST00000504884 SEC61GP60059 68 aa8.01□□□□□ -1.13
SNCAIP-207ENST00000504884 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
SNCAIP-207ENST00000504884 TPRXLQ17RH7 258 aa8□□□□□ -1.13
SNCAIP-207ENST00000504884 UQCR11O14957 56 aa7.97□□□□□ -1.13
SNCAIP-207ENST00000504884 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms