RNA–Protein interactions for RNA: ENST00000504880.5

SLC38A9-208, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-208ENST00000504880 KRTAP1-4P0C5Y4 121 aa13.31□□□□□ -0.28
SLC38A9-208ENST00000504880 MP68P56378 58 aa13.31□□□□□ -0.28
SLC38A9-208ENST00000504880 SPINK6Q6UWN8 80 aa13.3□□□□□ -0.28
SLC38A9-208ENST00000504880 FAT1Q14517 4588 aa13.3□□□□□ -0.28
SLC38A9-208ENST00000504880 RYR3Q15413 4870 aa13.3□□□□□ -0.28
SLC38A9-208ENST00000504880 FAM229BQ4G0N7 80 aa13.29□□□□□ -0.28
SLC38A9-208ENST00000504880 H0Y9P7 68 aa13.29□□□□□ -0.28
SLC38A9-208ENST00000504880 NOTCH2NLQ7Z3S9 236 aa13.29□□□□□ -0.28
SLC38A9-208ENST00000504880 LINC00208Q96KT6 92 aa13.27□□□□□ -0.28
SLC38A9-208ENST00000504880 SMR3BP02814 79 aaPredicted RBP13.25□□□□□ -0.29
SLC38A9-208ENST00000504880 TRAV22A0A0B4J277 110 aa13.22□□□□□ -0.29
SLC38A9-208ENST00000504880 H3BPC8 53 aa13.19□□□□□ -0.3
SLC38A9-208ENST00000504880 MRPL34Q9BQ48 92 aaKnown RBP13.19□□□□□ -0.3
SLC38A9-208ENST00000504880 TP53AIP1Q9HCN2 124 aa13.18□□□□□ -0.3
SLC38A9-208ENST00000504880 NDUFS5O43920 106 aa13.16□□□□□ -0.3
SLC38A9-208ENST00000504880 PLA2G1BP04054 148 aaKnown RBP13.16□□□□□ -0.3
SLC38A9-208ENST00000504880 C1orf64Q8NEQ6 169 aa13.16□□□□□ -0.3
SLC38A9-208ENST00000504880 Q5XG85 94 aa13.14□□□□□ -0.31
SLC38A9-208ENST00000504880 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
SLC38A9-208ENST00000504880 C1orf195Q5TG92 126 aa13.12□□□□□ -0.31
SLC38A9-208ENST00000504880 PRR4Q16378 134 aa13.11□□□□□ -0.31
SLC38A9-208ENST00000504880 TYMSOSQ8TAI1 123 aa13.08□□□□□ -0.31
SLC38A9-208ENST00000504880 SMIM26A0A096LP01 95 aa13.05□□□□□ -0.32
SLC38A9-208ENST00000504880 C8orf87E5RJ46 101 aa13.05□□□□□ -0.32
SLC38A9-208ENST00000504880 CYP4F30PQ9H0H9 118 aa13.05□□□□□ -0.32
SLC38A9-208ENST00000504880 FP248Q71RG6 208 aaPredicted RBP13.05□□□□□ -0.32
SLC38A9-208ENST00000504880 LIMD2Q9BT23 127 aa13.04□□□□□ -0.32
SLC38A9-208ENST00000504880 C4orf26Q17RF5 130 aa13.02□□□□□ -0.33
SLC38A9-208ENST00000504880 PRR26Q8N8Z3 221 aa13.02□□□□□ -0.33
SLC38A9-208ENST00000504880 C4orf48Q5BLP8 95 aa13.01□□□□□ -0.33
SLC38A9-208ENST00000504880 LINC00313P59037 77 aa13□□□□□ -0.33
SLC38A9-208ENST00000504880 SPANXA2-OT1Q8N9U9 137 aa13□□□□□ -0.33
SLC38A9-208ENST00000504880 HSPG2P98160 4391 aa12.99□□□□□ -0.33
SLC38A9-208ENST00000504880 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
SLC38A9-208ENST00000504880 Q5W150 140 aa12.98□□□□□ -0.33
SLC38A9-208ENST00000504880 SPINK1P00995 79 aa12.96□□□□□ -0.33
SLC38A9-208ENST00000504880 PCOTHQ58A44 107 aa12.96□□□□□ -0.33
SLC38A9-208ENST00000504880 KRTAP13-3Q3SY46 172 aa12.94□□□□□ -0.34
SLC38A9-208ENST00000504880 RYR1P21817 5038 aa12.91□□□□□ -0.34
SLC38A9-208ENST00000504880 LINC00304Q8N9R0 145 aa12.91□□□□□ -0.34
SLC38A9-208ENST00000504880 Q8N9P0 234 aaPredicted RBP12.89□□□□□ -0.35
SLC38A9-208ENST00000504880 KRTAP16-1A8MUX0 517 aa12.89□□□□□ -0.35
SLC38A9-208ENST00000504880 IGLV7-46A0A075B6I9 117 aa12.88□□□□□ -0.35
SLC38A9-208ENST00000504880 MPLKIPQ8TAP9 179 aa12.86□□□□□ -0.35
SLC38A9-208ENST00000504880 LOC101927531A0A1B0GV80 90 aa12.84□□□□□ -0.35
SLC38A9-208ENST00000504880 RPS29P62273 56 aaKnown RBP12.83□□□□□ -0.36
SLC38A9-208ENST00000504880 SPAG11AQ6PDA7 123 aa12.82□□□□□ -0.36
SLC38A9-208ENST00000504880 KRTAP17-1Q9BYP8 105 aa12.81□□□□□ -0.36
SLC38A9-208ENST00000504880 EPPK1P58107 5090 aaKnown RBP12.81□□□□□ -0.36
SLC38A9-208ENST00000504880 RETNLBQ9BQ08 111 aa12.8□□□□□ -0.36
SLC38A9-208ENST00000504880 KIAA1109Q2LD37 5005 aa12.8□□□□□ -0.36
SLC38A9-208ENST00000504880 LRP1Q07954 4544 aaKnown RBP12.79□□□□□ -0.36
SLC38A9-208ENST00000504880 FAM229AH3BQW9 127 aa12.79□□□□□ -0.36
SLC38A9-208ENST00000504880 Q5VSD8 79 aa12.74□□□□□ -0.37
SLC38A9-208ENST00000504880 TNXBP22105 4242 aa12.72□□□□□ -0.37
SLC38A9-208ENST00000504880 COA5Q86WW8 74 aa12.71□□□□□ -0.37
SLC38A9-208ENST00000504880 Q1T7F1 81 aa12.69□□□□□ -0.38
SLC38A9-208ENST00000504880 IGKV2-30P06310 120 aa12.66□□□□□ -0.38
SLC38A9-208ENST00000504880 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
SLC38A9-208ENST00000504880 HRES1P13985 223 aa12.61□□□□□ -0.39
SLC38A9-208ENST00000504880 FLG2Q5D862 2391 aaPredicted RBP12.58□□□□□ -0.4
SLC38A9-208ENST00000504880 SVIPQ8NHG7 77 aa12.58□□□□□ -0.4
SLC38A9-208ENST00000504880 Q8N1X5 172 aa12.57□□□□□ -0.4
SLC38A9-208ENST00000504880 MYCBP2O75592 4640 aa12.54□□□□□ -0.4
SLC38A9-208ENST00000504880 IGKV2D-30A0A075B6S6 120 aa12.54□□□□□ -0.4
SLC38A9-208ENST00000504880 C9orf92A6NGG3 77 aa12.54□□□□□ -0.4
SLC38A9-208ENST00000504880 PSPHP1O15172 72 aa12.54□□□□□ -0.4
SLC38A9-208ENST00000504880 KRTAP10-8P60410 259 aa12.52□□□□□ -0.41
SLC38A9-208ENST00000504880 V9GYY9 64 aa12.51□□□□□ -0.41
SLC38A9-208ENST00000504880 DMAC1Q96GE9 116 aa12.49□□□□□ -0.41
SLC38A9-208ENST00000504880 A8MUN3 132 aa12.47□□□□□ -0.41
SLC38A9-208ENST00000504880 ACYP2P14621 99 aa12.45□□□□□ -0.42
SLC38A9-208ENST00000504880 C20orf166-AS1Q96NR2 134 aa12.44□□□□□ -0.42
SLC38A9-208ENST00000504880 A8MUU9 505 aa12.43□□□□□ -0.42
SLC38A9-208ENST00000504880 BRK1Q8WUW1 75 aa12.4□□□□□ -0.42
SLC38A9-208ENST00000504880 Q5VV11 94 aa12.39□□□□□ -0.43
SLC38A9-208ENST00000504880 C7orf65Q6ZTY9 151 aa12.37□□□□□ -0.43
SLC38A9-208ENST00000504880 PRR15LQ9BU68 103 aa12.37□□□□□ -0.43
SLC38A9-208ENST00000504880 MT1HL1P0DM35 61 aa12.35□□□□□ -0.43
SLC38A9-208ENST00000504880 PRO0628Q9UI54 55 aa12.33□□□□□ -0.44
SLC38A9-208ENST00000504880 LINC01558Q9Y6Z2 57 aa12.32□□□□□ -0.44
SLC38A9-208ENST00000504880 DMBT1Q9UGM3 2413 aaPredicted RBP12.32□□□□□ -0.44
SLC38A9-208ENST00000504880 CHKB-CPT1BH3BT56 60 aa12.3□□□□□ -0.44
SLC38A9-208ENST00000504880 KRTAP4-5Q9BYR2 181 aa12.3□□□□□ -0.44
SLC38A9-208ENST00000504880 Q75L30 129 aa12.23□□□□□ -0.45
SLC38A9-208ENST00000504880 ABCA13Q86UQ4 5058 aa12.18□□□□□ -0.46
SLC38A9-208ENST00000504880 SPINK7P58062 85 aa12.15□□□□□ -0.46
SLC38A9-208ENST00000504880 A8MU10 97 aa12.11□□□□□ -0.47
SLC38A9-208ENST00000504880 A6NED7 52 aa12.08□□□□□ -0.48
SLC38A9-208ENST00000504880 BIRC6Q9NR09 4857 aa12.08□□□□□ -0.48
SLC38A9-208ENST00000504880 KRTAP3-1Q9BYR8 98 aa12.05□□□□□ -0.48
SLC38A9-208ENST00000504880 XP32Q5T750 250 aa12.03□□□□□ -0.48
SLC38A9-208ENST00000504880 HERC2O95714 4834 aa12.03□□□□□ -0.48
SLC38A9-208ENST00000504880 ATP11AUNQ6ZP68 121 aa12.02□□□□□ -0.49
SLC38A9-208ENST00000504880 RPL37P61927 97 aaKnown RBP12.01□□□□□ -0.49
SLC38A9-208ENST00000504880 LCA10Q71F78 164 aa12.01□□□□□ -0.49
SLC38A9-208ENST00000504880 A0A1B0GU69 56 aa11.98□□□□□ -0.49
SLC38A9-208ENST00000504880 LPAP08519 4548 aa11.92□□□□□ -0.5
SLC38A9-208ENST00000504880 CDC42SE1Q9NRR8 79 aa11.92□□□□□ -0.5
SLC38A9-208ENST00000504880 COX6B2Q6YFQ2 88 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms