RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
DDX41-204ENST00000504807 TRACP01848 142 aa6.53□□□□□ -1.36
DDX41-204ENST00000504807 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
DDX41-204ENST00000504807 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
DDX41-204ENST00000504807 TRBV20-1A0A075B6N2 111 aa6.52□□□□□ -1.37
DDX41-204ENST00000504807 UQCR10Q9UDW1 63 aa6.52□□□□□ -1.37
DDX41-204ENST00000504807 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
DDX41-204ENST00000504807 VPS25Q9BRG1 176 aa6.5□□□□□ -1.37
DDX41-204ENST00000504807 A0A1B0GVX0 72 aa6.49□□□□□ -1.37
DDX41-204ENST00000504807 H3BQ85 93 aa6.49□□□□□ -1.37
DDX41-204ENST00000504807 COX6CP09669 75 aa6.49□□□□□ -1.37
DDX41-204ENST00000504807 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
DDX41-204ENST00000504807 NAA38Q9BRA0 125 aaKnown RBP6.48□□□□□ -1.37
DDX41-204ENST00000504807 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
DDX41-204ENST00000504807 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
DDX41-204ENST00000504807 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
DDX41-204ENST00000504807 BAALC-AS2P0C853 105 aa6.45□□□□□ -1.38
DDX41-204ENST00000504807 SCGB1C2P0DMR2 95 aa6.44□□□□□ -1.38
DDX41-204ENST00000504807 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
DDX41-204ENST00000504807 Q6ZQT0 140 aa6.44□□□□□ -1.38
DDX41-204ENST00000504807 C8orf87E5RJ46 101 aa6.43□□□□□ -1.38
DDX41-204ENST00000504807 ZCCHC13Q8WW36 166 aaKnown RBP6.43□□□□□ -1.38
DDX41-204ENST00000504807 DSCR8Q96T75 97 aa6.42□□□□□ -1.38
DDX41-204ENST00000504807 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
DDX41-204ENST00000504807 C9JAW5 83 aa6.4□□□□□ -1.38
DDX41-204ENST00000504807 SPINK7P58062 85 aa6.4□□□□□ -1.38
DDX41-204ENST00000504807 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
DDX41-204ENST00000504807 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
DDX41-204ENST00000504807 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
DDX41-204ENST00000504807 J3KT08 172 aa6.36□□□□□ -1.39
DDX41-204ENST00000504807 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
DDX41-204ENST00000504807 C14orf132Q9NPU4 83 aa6.35□□□□□ -1.39
DDX41-204ENST00000504807 A8MWP4 228 aa6.34□□□□□ -1.39
DDX41-204ENST00000504807 ATXN8Q156A1 80 aa6.34□□□□□ -1.39
DDX41-204ENST00000504807 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
DDX41-204ENST00000504807 MMP24-AS1A0A0U1RRL7 71 aa6.3□□□□□ -1.4
DDX41-204ENST00000504807 JMJD7-PLA2G4BH0Y9G9 81 aa6.3□□□□□ -1.4
DDX41-204ENST00000504807 M0R143 59 aa6.3□□□□□ -1.4
DDX41-204ENST00000504807 NDUFB1O75438 58 aa6.29□□□□□ -1.4
DDX41-204ENST00000504807 Q6ZVQ6 151 aa6.29□□□□□ -1.4
DDX41-204ENST00000504807 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
DDX41-204ENST00000504807 PRR15Q8IV56 129 aa6.28□□□□□ -1.4
DDX41-204ENST00000504807 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
DDX41-204ENST00000504807 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
DDX41-204ENST00000504807 KMT2DO14686 5537 aa6.26□□□□□ -1.41
DDX41-204ENST00000504807 A0A1B0GW54 56 aa6.25□□□□□ -1.41
DDX41-204ENST00000504807 K7EQZ3 153 aa6.25□□□□□ -1.41
DDX41-204ENST00000504807 SMIM6P0DI80 62 aa6.23□□□□□ -1.41
DDX41-204ENST00000504807 BATFQ16520 125 aa6.23□□□□□ -1.41
DDX41-204ENST00000504807 NREPQ16612 68 aa6.23□□□□□ -1.41
DDX41-204ENST00000504807 LYRM7Q5U5X0 104 aa6.23□□□□□ -1.41
DDX41-204ENST00000504807 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
DDX41-204ENST00000504807 PDE6GP18545 87 aa6.22□□□□□ -1.41
DDX41-204ENST00000504807 Q5W150 140 aa6.22□□□□□ -1.41
DDX41-204ENST00000504807 TMEM254Q8TBM7 123 aa6.22□□□□□ -1.41
DDX41-204ENST00000504807 TAX1BP3O14907 124 aa6.2□□□□□ -1.42
DDX41-204ENST00000504807 hDV103S1A0JD37 113 aa6.18□□□□□ -1.42
DDX41-204ENST00000504807 Q8N9L7 120 aa6.18□□□□□ -1.42
DDX41-204ENST00000504807 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
DDX41-204ENST00000504807 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
DDX41-204ENST00000504807 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
DDX41-204ENST00000504807 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
DDX41-204ENST00000504807 H3BT86 120 aa6.15□□□□□ -1.42
DDX41-204ENST00000504807 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
DDX41-204ENST00000504807 LOC105371267A0A1B0GV96 52 aa6.14□□□□□ -1.43
DDX41-204ENST00000504807 NDUFS5O43920 106 aa6.14□□□□□ -1.43
DDX41-204ENST00000504807 SMCPP49901 116 aaPredicted RBP6.14□□□□□ -1.43
DDX41-204ENST00000504807 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
DDX41-204ENST00000504807 TSTD3H0UI37 97 aa6.13□□□□□ -1.43
DDX41-204ENST00000504807 IGKV2-30P06310 120 aa6.13□□□□□ -1.43
DDX41-204ENST00000504807 BPY2O14599 106 aa6.12□□□□□ -1.43
DDX41-204ENST00000504807 GPR98Q8WXG9 6306 aa6.11□□□□□ -1.43
DDX41-204ENST00000504807 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
DDX41-204ENST00000504807 HCG22E2RYF7 251 aa6.07□□□□□ -1.44
DDX41-204ENST00000504807 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
DDX41-204ENST00000504807 C7orf65Q6ZTY9 151 aa6.07□□□□□ -1.44
DDX41-204ENST00000504807 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
DDX41-204ENST00000504807 PRO0461Q9UI25 63 aa6.05□□□□□ -1.44
DDX41-204ENST00000504807 SPCS1Q9Y6A9 102 aa6.05□□□□□ -1.44
DDX41-204ENST00000504807 KRTAP5-9P26371 169 aa6.04□□□□□ -1.44
DDX41-204ENST00000504807 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
DDX41-204ENST00000504807 A6NN06 94 aa5.98□□□□□ -1.45
DDX41-204ENST00000504807 MT1BP07438 61 aa5.98□□□□□ -1.45
DDX41-204ENST00000504807 CXCL6P80162 114 aa5.97□□□□□ -1.45
DDX41-204ENST00000504807 K7EP34 96 aa5.94□□□□□ -1.46
DDX41-204ENST00000504807 LCA10Q71F78 164 aa5.93□□□□□ -1.46
DDX41-204ENST00000504807 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
DDX41-204ENST00000504807 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
DDX41-204ENST00000504807 UBL5Q9BZL1 73 aa5.92□□□□□ -1.46
DDX41-204ENST00000504807 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
DDX41-204ENST00000504807 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.46
DDX41-204ENST00000504807 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.46
DDX41-204ENST00000504807 S4R3F8 94 aa5.9□□□□□ -1.46
DDX41-204ENST00000504807 A0A087WVE0 104 aa5.89□□□□□ -1.47
DDX41-204ENST00000504807 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
DDX41-204ENST00000504807 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
DDX41-204ENST00000504807 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
DDX41-204ENST00000504807 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
DDX41-204ENST00000504807 SPRR2EP22531 72 aa5.85□□□□□ -1.47
DDX41-204ENST00000504807 SPRR2BP35325 72 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms