RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 RPL39LQ96EH5 51 aaKnown RBP0.23□□□□□ -2.37
GYPA-204ENST00000504786 PKD1L2Q7Z442 2459 aa0.23□□□□□ -2.37
GYPA-204ENST00000504786 TNXBP22105 4242 aa0.23□□□□□ -2.37
GYPA-204ENST00000504786 CHD8Q9HCK8 2581 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 CREBBPQ92793 2442 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 C9orf92A6NGG3 77 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 M0QZ58 72 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 PRM1P04553 51 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 ARHGAP5-AS1Q96IT6 56 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 LYSTQ99698 3801 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 CHD6Q8TD26 2715 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 ATRQ13535 2644 aa0.22□□□□□ -2.37
GYPA-204ENST00000504786 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
GYPA-204ENST00000504786 KMT2AQ03164 3969 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 TNRC18O15417 2968 aaPredicted RBP0.21□□□□□ -2.38
GYPA-204ENST00000504786 WNK1Q9H4A3 2382 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 COL6A5A8TX70 2615 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 ACACAQ13085 2346 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 KMT2DO14686 5537 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 PKD1L1Q8TDX9 2849 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 VPS13BQ7Z7G8 4022 aa0.21□□□□□ -2.38
GYPA-204ENST00000504786 APC2O95996 2303 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 VPS13DQ5THJ4 4388 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 SACSQ9NZJ4 4579 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 TNP1P09430 55 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 LEAP2Q969E1 77 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 ACANP16112 2415 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 DNAH11Q96DT5 4516 aa0.2□□□□□ -2.38
GYPA-204ENST00000504786 SRRM2Q9UQ35 2752 aaKnown RBP0.19□□□□□ -2.38
GYPA-204ENST00000504786 CHD7Q9P2D1 2997 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 DNAH3Q8TD57 4116 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 SPRR2DP22532 72 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 LINC01590Q5TEZ4 76 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 TOMM7Q9P0U1 55 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 AKAP13Q12802 2813 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 HECTD1Q9ULT8 2610 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 ZZEF1O43149 2961 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 SPENQ96T58 3664 aaKnown RBP0.19□□□□□ -2.38
GYPA-204ENST00000504786 NBPF19A0A087WUL8 3843 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 HSPG2P98160 4391 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 PTPN13Q12923 2485 aa0.19□□□□□ -2.38
GYPA-204ENST00000504786 PKHD1L1Q86WI1 4243 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 DMBT1Q9UGM3 2413 aaPredicted RBP0.18□□□□□ -2.38
GYPA-204ENST00000504786 ANK3Q12955 4377 aaKnown RBP0.18□□□□□ -2.38
GYPA-204ENST00000504786 SETD2Q9BYW2 2564 aaPredicted RBP0.18□□□□□ -2.38
GYPA-204ENST00000504786 FRYQ5TBA9 3013 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 H3BNG1 76 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 SPRR2BP35325 72 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 PRCDQ00LT1 54 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 PKD1P98161 4303 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 HECTD4Q9Y4D8 3996 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 DNAH2Q9P225 4427 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 LPAP08519 4548 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 DYNC2H1Q8NCM8 4307 aaKnown RBP0.18□□□□□ -2.38
GYPA-204ENST00000504786 CUBNO60494 3623 aa0.18□□□□□ -2.38
GYPA-204ENST00000504786 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
GYPA-204ENST00000504786 TENM2Q9NT68 2774 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 DNAH7Q8WXX0 4024 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 COL12A1Q99715 3063 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 FAM186AA6NE01 2351 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 PDZD2O15018 2839 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 SYNE2Q8WXH0 6885 aaKnown RBP0.17□□□□□ -2.38
GYPA-204ENST00000504786 DCHS2Q6V1P9 2916 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 CCDC168Q8NDH2 2452 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 TTTY10Q9BZA0 68 aa0.17□□□□□ -2.38
GYPA-204ENST00000504786 SPTBN5Q9NRC6 3674 aaKnown RBP0.17□□□□□ -2.38
GYPA-204ENST00000504786 FLGP20930 4061 aaPredicted RBP0.17□□□□□ -2.38
GYPA-204ENST00000504786 STAB1Q9NY15 2570 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 NF1P21359 2839 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 RANBP2P49792 3224 aaKnown RBP0.16□□□□□ -2.38
GYPA-204ENST00000504786 MTORP42345 2549 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 K7EIM0 57 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 MT1AP04731 61 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 SPRR2AP35326 72 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 SONP18583 2426 aaKnown RBP0.16□□□□□ -2.38
GYPA-204ENST00000504786 DNAH8Q96JB1 4490 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 LRP1BQ9NZR2 4599 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 DNAH6Q9C0G6 4158 aa0.16□□□□□ -2.38
GYPA-204ENST00000504786 SPTBN4Q9H254 2564 aa0.15□□□□□ -2.38
GYPA-204ENST00000504786 ZFHX4Q86UP3 3567 aa0.15□□□□□ -2.38
GYPA-204ENST00000504786 SPART-AS1P0CW21 52 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 KRTAP8-1Q8IUC2 63 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 FLNCQ14315 2725 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 CELSR3Q9NYQ7 3312 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 RIF1Q5UIP0 2472 aaKnown RBP0.15□□□□□ -2.39
GYPA-204ENST00000504786 TACC2O95359 2948 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 DMXL1Q9Y485 3027 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 DNAH1Q9P2D7 4330 aa0.15□□□□□ -2.39
GYPA-204ENST00000504786 FLNBO75369 2602 aaKnown RBP0.15□□□□□ -2.39
GYPA-204ENST00000504786 ACACBO00763 2458 aa0.14□□□□□ -2.39
GYPA-204ENST00000504786 RELNP78509 3460 aa0.14□□□□□ -2.39
GYPA-204ENST00000504786 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
GYPA-204ENST00000504786 GCN1Q92616 2671 aaKnown RBP0.14□□□□□ -2.39
GYPA-204ENST00000504786 AKAP9Q99996 3911 aa0.14□□□□□ -2.39
GYPA-204ENST00000504786 LAMA5O15230 3695 aa0.14□□□□□ -2.39
GYPA-204ENST00000504786 SPG11Q96JI7 2443 aa0.14□□□□□ -2.39
GYPA-204ENST00000504786 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms