RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NDUFB1O75438 58 aa5.85□□□□□ -1.47
DDX41-203ENST00000504781 Q96NJ1 140 aa5.85□□□□□ -1.47
DDX41-203ENST00000504781 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
DDX41-203ENST00000504781 A8MWP4 228 aa5.84□□□□□ -1.47
DDX41-203ENST00000504781 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
DDX41-203ENST00000504781 DEFB116Q30KQ4 102 aa5.84□□□□□ -1.47
DDX41-203ENST00000504781 PRR15Q8IV56 129 aa5.82□□□□□ -1.48
DDX41-203ENST00000504781 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
DDX41-203ENST00000504781 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
DDX41-203ENST00000504781 XP32Q5T750 250 aa5.8□□□□□ -1.48
DDX41-203ENST00000504781 PKHD1L1Q86WI1 4243 aa5.79□□□□□ -1.48
DDX41-203ENST00000504781 A0A087WVE0 104 aa5.79□□□□□ -1.48
DDX41-203ENST00000504781 K7EQZ3 153 aa5.79□□□□□ -1.48
DDX41-203ENST00000504781 Q8N9L7 120 aa5.78□□□□□ -1.48
DDX41-203ENST00000504781 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
DDX41-203ENST00000504781 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
DDX41-203ENST00000504781 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
DDX41-203ENST00000504781 ATOX1O00244 68 aa5.77□□□□□ -1.49
DDX41-203ENST00000504781 SMIM20Q8N5G0 67 aa5.77□□□□□ -1.49
DDX41-203ENST00000504781 MT1HL1P0DM35 61 aa5.76□□□□□ -1.49
DDX41-203ENST00000504781 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
DDX41-203ENST00000504781 C8orf87E5RJ46 101 aa5.75□□□□□ -1.49
DDX41-203ENST00000504781 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
DDX41-203ENST00000504781 CASC2Q6XLA1 102 aa5.73□□□□□ -1.49
DDX41-203ENST00000504781 C8orf17Q9NRJ1 99 aa5.73□□□□□ -1.49
DDX41-203ENST00000504781 IGHV6-1A0A0B4J1U7 121 aa5.72□□□□□ -1.49
DDX41-203ENST00000504781 hDV103S1A0JD37 113 aa5.72□□□□□ -1.49
DDX41-203ENST00000504781 LINC00313P59037 77 aa5.72□□□□□ -1.49
DDX41-203ENST00000504781 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
DDX41-203ENST00000504781 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.49
DDX41-203ENST00000504781 MMP24-AS1A0A0U1RRL7 71 aa5.71□□□□□ -1.5
DDX41-203ENST00000504781 KRTAP4-8Q9BYQ9 185 aa5.71□□□□□ -1.5
DDX41-203ENST00000504781 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
DDX41-203ENST00000504781 PCP4P48539 62 aa5.7□□□□□ -1.5
DDX41-203ENST00000504781 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
DDX41-203ENST00000504781 TMEM254Q8TBM7 123 aa5.69□□□□□ -1.5
DDX41-203ENST00000504781 FP248Q71RG6 208 aaPredicted RBP5.68□□□□□ -1.5
DDX41-203ENST00000504781 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
DDX41-203ENST00000504781 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
DDX41-203ENST00000504781 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
DDX41-203ENST00000504781 OCR1Q9BZK8 76 aa5.67□□□□□ -1.5
DDX41-203ENST00000504781 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
DDX41-203ENST00000504781 COX7CP15954 63 aa5.66□□□□□ -1.5
DDX41-203ENST00000504781 UQCRQO14949 82 aa5.65□□□□□ -1.5
DDX41-203ENST00000504781 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
DDX41-203ENST00000504781 TNXBP22105 4242 aa5.65□□□□□ -1.51
DDX41-203ENST00000504781 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
DDX41-203ENST00000504781 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
DDX41-203ENST00000504781 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
DDX41-203ENST00000504781 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
DDX41-203ENST00000504781 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
DDX41-203ENST00000504781 RETNLBQ9BQ08 111 aa5.6□□□□□ -1.51
DDX41-203ENST00000504781 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
DDX41-203ENST00000504781 H3BPC8 53 aa5.59□□□□□ -1.51
DDX41-203ENST00000504781 NDUFS5O43920 106 aa5.59□□□□□ -1.51
DDX41-203ENST00000504781 LRP2P98164 4655 aa5.57□□□□□ -1.52
DDX41-203ENST00000504781 MP68P56378 58 aa5.57□□□□□ -1.52
DDX41-203ENST00000504781 TRAV22A0A0B4J277 110 aa5.55□□□□□ -1.52
DDX41-203ENST00000504781 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
DDX41-203ENST00000504781 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
DDX41-203ENST00000504781 C20orf166-AS1Q96NR2 134 aa5.55□□□□□ -1.52
DDX41-203ENST00000504781 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
DDX41-203ENST00000504781 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
DDX41-203ENST00000504781 A8MUU9 505 aa5.54□□□□□ -1.52
DDX41-203ENST00000504781 PRR4Q16378 134 aa5.54□□□□□ -1.52
DDX41-203ENST00000504781 C20orf197Q8N268 126 aa5.54□□□□□ -1.52
DDX41-203ENST00000504781 A0A0U1RQV1 116 aa5.53□□□□□ -1.52
DDX41-203ENST00000504781 H0Y9P7 68 aa5.53□□□□□ -1.52
DDX41-203ENST00000504781 NDUFC1O43677 76 aa5.53□□□□□ -1.52
DDX41-203ENST00000504781 KRTAP13-3Q3SY46 172 aa5.53□□□□□ -1.52
DDX41-203ENST00000504781 Q75L30 129 aa5.52□□□□□ -1.53
DDX41-203ENST00000504781 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
DDX41-203ENST00000504781 Q5W150 140 aa5.51□□□□□ -1.53
DDX41-203ENST00000504781 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
DDX41-203ENST00000504781 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
DDX41-203ENST00000504781 ZCCHC13Q8WW36 166 aaKnown RBP5.5□□□□□ -1.53
DDX41-203ENST00000504781 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
DDX41-203ENST00000504781 LPAP08519 4548 aa5.47□□□□□ -1.53
DDX41-203ENST00000504781 LOC101927531A0A1B0GV80 90 aa5.47□□□□□ -1.53
DDX41-203ENST00000504781 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
DDX41-203ENST00000504781 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
DDX41-203ENST00000504781 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
DDX41-203ENST00000504781 H7BZZ5 65 aa5.44□□□□□ -1.54
DDX41-203ENST00000504781 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
DDX41-203ENST00000504781 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
DDX41-203ENST00000504781 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
DDX41-203ENST00000504781 TMEM258P61165 79 aa5.4□□□□□ -1.54
DDX41-203ENST00000504781 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
DDX41-203ENST00000504781 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
DDX41-203ENST00000504781 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
DDX41-203ENST00000504781 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
DDX41-203ENST00000504781 SPINK7P58062 85 aa5.36□□□□□ -1.55
DDX41-203ENST00000504781 IGKV2D-30A0A075B6S6 120 aa5.35□□□□□ -1.55
DDX41-203ENST00000504781 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
DDX41-203ENST00000504781 PCOTHQ58A44 107 aa5.35□□□□□ -1.55
DDX41-203ENST00000504781 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
DDX41-203ENST00000504781 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
DDX41-203ENST00000504781 MUC2Q02817 5179 aa5.32□□□□□ -1.56
DDX41-203ENST00000504781 FAM236DA0A1B0GTK5 79 aa5.32□□□□□ -1.56
DDX41-203ENST00000504781 FAM236CP0DP71 79 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms