RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 MAST4O15021 2626 aa3.85□□□□□ -1.79
ITGA1-203ENST00000504669 LAMA1P25391 3075 aa3.85□□□□□ -1.79
ITGA1-203ENST00000504669 LRBAP50851 2863 aa3.84□□□□□ -1.79
ITGA1-203ENST00000504669 ZFHX4Q86UP3 3567 aa3.83□□□□□ -1.8
ITGA1-203ENST00000504669 NSD1Q96L73 2696 aaPredicted RBP3.83□□□□□ -1.8
ITGA1-203ENST00000504669 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
ITGA1-203ENST00000504669 KALRNO60229 2985 aa3.82□□□□□ -1.8
ITGA1-203ENST00000504669 DSPP15924 2871 aaKnown RBP3.82□□□□□ -1.8
ITGA1-203ENST00000504669 FREM2Q5SZK8 3169 aa3.82□□□□□ -1.8
ITGA1-203ENST00000504669 TEX15Q9BXT5 2789 aa3.82□□□□□ -1.8
ITGA1-203ENST00000504669 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
ITGA1-203ENST00000504669 PCNTO95613 3336 aa3.81□□□□□ -1.8
ITGA1-203ENST00000504669 ITPR3Q14573 2671 aa3.81□□□□□ -1.8
ITGA1-203ENST00000504669 USP34Q70CQ2 3546 aa3.8□□□□□ -1.8
ITGA1-203ENST00000504669 DCHS1Q96JQ0 3298 aa3.79□□□□□ -1.8
ITGA1-203ENST00000504669 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
ITGA1-203ENST00000504669 CMYA5Q8N3K9 4069 aa3.79□□□□□ -1.8
ITGA1-203ENST00000504669 AKAP13Q12802 2813 aa3.78□□□□□ -1.8
ITGA1-203ENST00000504669 TRIOO75962 3097 aa3.78□□□□□ -1.8
ITGA1-203ENST00000504669 USP24Q9UPU5 2620 aa3.78□□□□□ -1.8
ITGA1-203ENST00000504669 SETXQ7Z333 2677 aaKnown RBP3.78□□□□□ -1.8
ITGA1-203ENST00000504669 TENM2Q9NT68 2774 aa3.77□□□□□ -1.81
ITGA1-203ENST00000504669 MT3P25713 68 aa3.77□□□□□ -1.81
ITGA1-203ENST00000504669 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
ITGA1-203ENST00000504669 ATRQ13535 2644 aa3.76□□□□□ -1.81
ITGA1-203ENST00000504669 TNRC18O15417 2968 aaPredicted RBP3.74□□□□□ -1.81
ITGA1-203ENST00000504669 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
ITGA1-203ENST00000504669 CEP350Q5VT06 3117 aa3.73□□□□□ -1.81
ITGA1-203ENST00000504669 DNAH8Q96JB1 4490 aa3.73□□□□□ -1.81
ITGA1-203ENST00000504669 PRUNE2Q8WUY3 3088 aa3.73□□□□□ -1.81
ITGA1-203ENST00000504669 COL6A3P12111 3177 aa3.73□□□□□ -1.81
ITGA1-203ENST00000504669 FRYQ5TBA9 3013 aa3.71□□□□□ -1.82
ITGA1-203ENST00000504669 GOLGB1Q14789 3259 aaKnown RBP3.71□□□□□ -1.82
ITGA1-203ENST00000504669 SRRM2Q9UQ35 2752 aaKnown RBP3.7□□□□□ -1.82
ITGA1-203ENST00000504669 LAMA2P24043 3122 aaKnown RBP3.7□□□□□ -1.82
ITGA1-203ENST00000504669 IGSF10Q6WRI0 2623 aa3.69□□□□□ -1.82
ITGA1-203ENST00000504669 DNAH14Q0VDD8 3507 aa3.69□□□□□ -1.82
ITGA1-203ENST00000504669 AKAP9Q99996 3911 aa3.69□□□□□ -1.82
ITGA1-203ENST00000504669 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
ITGA1-203ENST00000504669 DNAH10Q8IVF4 4471 aa3.68□□□□□ -1.82
ITGA1-203ENST00000504669 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
ITGA1-203ENST00000504669 RELNP78509 3460 aa3.67□□□□□ -1.82
ITGA1-203ENST00000504669 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
ITGA1-203ENST00000504669 VPS13AQ96RL7 3174 aa3.66□□□□□ -1.82
ITGA1-203ENST00000504669 SZT2Q5T011 3432 aa3.65□□□□□ -1.82
ITGA1-203ENST00000504669 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.83
ITGA1-203ENST00000504669 COL12A1Q99715 3063 aa3.65□□□□□ -1.83
ITGA1-203ENST00000504669 LCE2CQ5TA81 110 aa3.65□□□□□ -1.83
ITGA1-203ENST00000504669 MKI67P46013 3256 aaKnown RBP3.64□□□□□ -1.83
ITGA1-203ENST00000504669 CHD7Q9P2D1 2997 aa3.63□□□□□ -1.83
ITGA1-203ENST00000504669 TRANK1O15050 2925 aa3.63□□□□□ -1.83
ITGA1-203ENST00000504669 FLNBO75369 2602 aaKnown RBP3.62□□□□□ -1.83
ITGA1-203ENST00000504669 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
ITGA1-203ENST00000504669 SPTBN5Q9NRC6 3674 aaKnown RBP3.6□□□□□ -1.83
ITGA1-203ENST00000504669 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
ITGA1-203ENST00000504669 PRM1P04553 51 aa3.6□□□□□ -1.83
ITGA1-203ENST00000504669 VPS13DQ5THJ4 4388 aa3.6□□□□□ -1.83
ITGA1-203ENST00000504669 FRYLO94915 3013 aa3.59□□□□□ -1.83
ITGA1-203ENST00000504669 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
ITGA1-203ENST00000504669 CELSR3Q9NYQ7 3312 aa3.57□□□□□ -1.84
ITGA1-203ENST00000504669 TENM3Q9P273 2699 aa3.56□□□□□ -1.84
ITGA1-203ENST00000504669 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
ITGA1-203ENST00000504669 HTTP42858 3142 aa3.55□□□□□ -1.84
ITGA1-203ENST00000504669 CSMD1Q96PZ7 3565 aa3.55□□□□□ -1.84
ITGA1-203ENST00000504669 UTP20O75691 2785 aaKnown RBP3.54□□□□□ -1.84
ITGA1-203ENST00000504669 CELSR2Q9HCU4 2923 aa3.54□□□□□ -1.84
ITGA1-203ENST00000504669 ASH1LQ9NR48 2969 aaKnown RBP3.54□□□□□ -1.84
ITGA1-203ENST00000504669 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
ITGA1-203ENST00000504669 MUC3AQ02505 3323 aa3.53□□□□□ -1.84
ITGA1-203ENST00000504669 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
ITGA1-203ENST00000504669 KRTAP21-3Q3LHN1 58 aa3.52□□□□□ -1.85
ITGA1-203ENST00000504669 LCE2BO14633 110 aa3.51□□□□□ -1.85
ITGA1-203ENST00000504669 DNAH3Q8TD57 4116 aa3.49□□□□□ -1.85
ITGA1-203ENST00000504669 HIVEP1P15822 2718 aa3.49□□□□□ -1.85
ITGA1-203ENST00000504669 NBPF19A0A087WUL8 3843 aa3.48□□□□□ -1.85
ITGA1-203ENST00000504669 COL7A1Q02388 2944 aa3.48□□□□□ -1.85
ITGA1-203ENST00000504669 NBEAQ8NFP9 2946 aa3.46□□□□□ -1.85
ITGA1-203ENST00000504669 MT1GP13640 62 aa3.45□□□□□ -1.86
ITGA1-203ENST00000504669 TENM4Q6N022 2769 aa3.45□□□□□ -1.86
ITGA1-203ENST00000504669 ZNF292O60281 2723 aa3.44□□□□□ -1.86
ITGA1-203ENST00000504669 CHD9Q3L8U1 2897 aa3.44□□□□□ -1.86
ITGA1-203ENST00000504669 DMXL1Q9Y485 3027 aa3.44□□□□□ -1.86
ITGA1-203ENST00000504669 DNAH17Q9UFH2 4485 aa3.43□□□□□ -1.86
ITGA1-203ENST00000504669 WDFY3Q8IZQ1 3526 aa3.43□□□□□ -1.86
ITGA1-203ENST00000504669 ANK3Q12955 4377 aaKnown RBP3.42□□□□□ -1.86
ITGA1-203ENST00000504669 MEGF8Q7Z7M0 2845 aa3.41□□□□□ -1.86
ITGA1-203ENST00000504669 ITPR2Q14571 2701 aa3.4□□□□□ -1.87
ITGA1-203ENST00000504669 CFAP47Q6ZTR5 3102 aa3.38□□□□□ -1.87
ITGA1-203ENST00000504669 DNAH5Q8TE73 4624 aa3.38□□□□□ -1.87
ITGA1-203ENST00000504669 KRTAP4-1Q9BYQ7 146 aa3.37□□□□□ -1.87
ITGA1-203ENST00000504669 DNAH9Q9NYC9 4486 aa3.37□□□□□ -1.87
ITGA1-203ENST00000504669 TENM1Q9UKZ4 2725 aa3.36□□□□□ -1.87
ITGA1-203ENST00000504669 MT2AP02795 61 aa3.36□□□□□ -1.87
ITGA1-203ENST00000504669 MT1HP80294 61 aa3.33□□□□□ -1.88
ITGA1-203ENST00000504669 VCANP13611 3396 aa3.33□□□□□ -1.88
ITGA1-203ENST00000504669 CELSR1Q9NYQ6 3014 aa3.33□□□□□ -1.88
ITGA1-203ENST00000504669 SPENQ96T58 3664 aaKnown RBP3.33□□□□□ -1.88
ITGA1-203ENST00000504669 DMXL2Q8TDJ6 3036 aa3.33□□□□□ -1.88
ITGA1-203ENST00000504669 XIRP2A4UGR9 3374 aa3.32□□□□□ -1.88
ITGA1-203ENST00000504669 HRNRQ86YZ3 2850 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms