RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
LSM6-204ENST00000504181 C5orf47Q569G3 176 aa5.34□□□□□ -1.55
LSM6-204ENST00000504181 NDUFV3P56181 108 aaKnown RBP5.33□□□□□ -1.56
LSM6-204ENST00000504181 LYRM7Q5U5X0 104 aa5.33□□□□□ -1.56
LSM6-204ENST00000504181 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
LSM6-204ENST00000504181 LINC00472Q9H8W2 130 aa5.32□□□□□ -1.56
LSM6-204ENST00000504181 RAB37Q96AX2 223 aa5.3□□□□□ -1.56
LSM6-204ENST00000504181 C12orf57Q99622 126 aa5.3□□□□□ -1.56
LSM6-204ENST00000504181 H3BMG7 143 aa5.29□□□□□ -1.56
LSM6-204ENST00000504181 UQCC3Q6UW78 93 aa5.29□□□□□ -1.56
LSM6-204ENST00000504181 KLKP1Q107X0 134 aa5.27□□□□□ -1.57
LSM6-204ENST00000504181 DSCR8Q96T75 97 aa5.27□□□□□ -1.57
LSM6-204ENST00000504181 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
LSM6-204ENST00000504181 TRGC2P03986 189 aa5.25□□□□□ -1.57
LSM6-204ENST00000504181 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
LSM6-204ENST00000504181 PRO2289Q9P1D8 64 aa5.24□□□□□ -1.57
LSM6-204ENST00000504181 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
LSM6-204ENST00000504181 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
LSM6-204ENST00000504181 SYS1-DBNDD2H3BUS1 97 aa5.22□□□□□ -1.57
LSM6-204ENST00000504181 MT1XP80297 61 aa5.22□□□□□ -1.57
LSM6-204ENST00000504181 CLLU1Q5K131 121 aa5.22□□□□□ -1.57
LSM6-204ENST00000504181 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.57
LSM6-204ENST00000504181 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
LSM6-204ENST00000504181 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
LSM6-204ENST00000504181 A0A1B0GV72 72 aa5.19□□□□□ -1.58
LSM6-204ENST00000504181 LINC01545Q5VT33 79 aa5.19□□□□□ -1.58
LSM6-204ENST00000504181 FABP2P12104 132 aa5.18□□□□□ -1.58
LSM6-204ENST00000504181 ANKRD29Q8N6D5 301 aa5.18□□□□□ -1.58
LSM6-204ENST00000504181 LCA10Q71F78 164 aa5.17□□□□□ -1.58
LSM6-204ENST00000504181 YPEL4Q96NS1 127 aa5.17□□□□□ -1.58
LSM6-204ENST00000504181 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
LSM6-204ENST00000504181 TRACP01848 142 aa5.15□□□□□ -1.59
LSM6-204ENST00000504181 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
LSM6-204ENST00000504181 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
LSM6-204ENST00000504181 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
LSM6-204ENST00000504181 S4R3F8 94 aa5.14□□□□□ -1.59
LSM6-204ENST00000504181 SNCGO76070 127 aa5.13□□□□□ -1.59
LSM6-204ENST00000504181 CCKP06307 115 aa5.13□□□□□ -1.59
LSM6-204ENST00000504181 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
LSM6-204ENST00000504181 C8orf17Q9NRJ1 99 aa5.12□□□□□ -1.59
LSM6-204ENST00000504181 RBM3P98179 157 aaKnown RBP5.11□□□□□ -1.59
LSM6-204ENST00000504181 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
LSM6-204ENST00000504181 APOC3P02656 99 aa5.1□□□□□ -1.59
LSM6-204ENST00000504181 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
LSM6-204ENST00000504181 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
LSM6-204ENST00000504181 J3KT08 172 aa5.08□□□□□ -1.6
LSM6-204ENST00000504181 NDUFB1O75438 58 aa5.08□□□□□ -1.6
LSM6-204ENST00000504181 MT4P47944 62 aa5.08□□□□□ -1.6
LSM6-204ENST00000504181 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
LSM6-204ENST00000504181 Q6ZVQ6 151 aa5.08□□□□□ -1.6
LSM6-204ENST00000504181 SNAPINO95295 136 aa5.07□□□□□ -1.6
LSM6-204ENST00000504181 C2orf91Q6ZV80 131 aa5.07□□□□□ -1.6
LSM6-204ENST00000504181 VPS25Q9BRG1 176 aa5.07□□□□□ -1.6
LSM6-204ENST00000504181 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
LSM6-204ENST00000504181 H0YGX0 51 aa5.05□□□□□ -1.6
LSM6-204ENST00000504181 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
LSM6-204ENST00000504181 SVBPQ8N300 66 aa5.02□□□□□ -1.61
LSM6-204ENST00000504181 NDUFS5O43920 106 aa5□□□□□ -1.61
LSM6-204ENST00000504181 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
LSM6-204ENST00000504181 KRTDAPP60985 99 aa4.99□□□□□ -1.61
LSM6-204ENST00000504181 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
LSM6-204ENST00000504181 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
LSM6-204ENST00000504181 A0A1B0GX51 115 aa4.98□□□□□ -1.61
LSM6-204ENST00000504181 NDUFA5Q16718 116 aa4.98□□□□□ -1.61
LSM6-204ENST00000504181 Q5W150 140 aa4.97□□□□□ -1.61
LSM6-204ENST00000504181 TMEM254Q8TBM7 123 aa4.96□□□□□ -1.62
LSM6-204ENST00000504181 ORMDL1Q9P0S3 153 aa4.94□□□□□ -1.62
LSM6-204ENST00000504181 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
LSM6-204ENST00000504181 A8MUN3 132 aa4.93□□□□□ -1.62
LSM6-204ENST00000504181 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
LSM6-204ENST00000504181 TRIAP1O43715 76 aa4.92□□□□□ -1.62
LSM6-204ENST00000504181 HIST1H4GQ99525 98 aa4.92□□□□□ -1.62
LSM6-204ENST00000504181 C1orf64Q8NEQ6 169 aa4.91□□□□□ -1.62
LSM6-204ENST00000504181 K7EQZ3 153 aa4.9□□□□□ -1.63
LSM6-204ENST00000504181 DNAL4O96015 105 aa4.9□□□□□ -1.63
LSM6-204ENST00000504181 Q6ZQT0 140 aa4.9□□□□□ -1.63
LSM6-204ENST00000504181 TMEM256-PLSCR3K7ERE1 68 aa4.89□□□□□ -1.63
LSM6-204ENST00000504181 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
LSM6-204ENST00000504181 PDE6GP18545 87 aa4.88□□□□□ -1.63
LSM6-204ENST00000504181 H3BQ85 93 aa4.87□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BKO60814 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BJP06899 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BOP23527 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BBP33778 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BDP58876 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BCP62807 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST2H2BEQ16778 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BHQ93079 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BNQ99877 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 HIST1H2BMQ99879 126 aa4.86□□□□□ -1.63
LSM6-204ENST00000504181 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
LSM6-204ENST00000504181 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
LSM6-204ENST00000504181 UBE2V1Q13404 147 aa4.83□□□□□ -1.64
LSM6-204ENST00000504181 C9JAW5 83 aa4.79□□□□□ -1.64
LSM6-204ENST00000504181 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
LSM6-204ENST00000504181 A0A087WVE0 104 aa4.77□□□□□ -1.65
LSM6-204ENST00000504181 CYSTM1Q9H1C7 97 aa4.77□□□□□ -1.65
LSM6-204ENST00000504181 HSBP1L1C9JCN9 74 aa4.76□□□□□ -1.65
LSM6-204ENST00000504181 HCG22E2RYF7 251 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms