RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 DNAH17Q9UFH2 4485 aa8.83□□□□□ -1
SNF8-203ENST00000504000 A0A087X002 238 aa8.83□□□□□ -1
SNF8-203ENST00000504000 HRES1P13985 223 aa8.83□□□□□ -1
SNF8-203ENST00000504000 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
SNF8-203ENST00000504000 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
SNF8-203ENST00000504000 IGLV7-43P04211 117 aa8.82□□□□□ -1
SNF8-203ENST00000504000 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
SNF8-203ENST00000504000 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
SNF8-203ENST00000504000 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
SNF8-203ENST00000504000 C8orf87E5RJ46 101 aa8.81□□□□□ -1
SNF8-203ENST00000504000 A6NED7 52 aa8.8□□□□□ -1
SNF8-203ENST00000504000 A8MU10 97 aa8.8□□□□□ -1
SNF8-203ENST00000504000 LCA10Q71F78 164 aa8.8□□□□□ -1
SNF8-203ENST00000504000 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
SNF8-203ENST00000504000 PRKDCP78527 4128 aaKnown RBP8.8□□□□□ -1
SNF8-203ENST00000504000 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
SNF8-203ENST00000504000 Q5W150 140 aa8.77□□□□□ -1.01
SNF8-203ENST00000504000 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
SNF8-203ENST00000504000 SEC61GP60059 68 aa8.74□□□□□ -1.01
SNF8-203ENST00000504000 C1orf134Q5TEV5 83 aa8.73□□□□□ -1.01
SNF8-203ENST00000504000 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
SNF8-203ENST00000504000 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
SNF8-203ENST00000504000 ACYP2P14621 99 aa8.72□□□□□ -1.01
SNF8-203ENST00000504000 CIRBP-AS1Q8TBR5 109 aa8.72□□□□□ -1.01
SNF8-203ENST00000504000 FRAS1Q86XX4 4008 aa8.71□□□□□ -1.02
SNF8-203ENST00000504000 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
SNF8-203ENST00000504000 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
SNF8-203ENST00000504000 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
SNF8-203ENST00000504000 DMAC1Q96GE9 116 aa8.68□□□□□ -1.02
SNF8-203ENST00000504000 LINC00313P59037 77 aa8.68□□□□□ -1.02
SNF8-203ENST00000504000 A6NN06 94 aa8.67□□□□□ -1.02
SNF8-203ENST00000504000 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
SNF8-203ENST00000504000 KMT2AQ03164 3969 aa8.64□□□□□ -1.03
SNF8-203ENST00000504000 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
SNF8-203ENST00000504000 SPINK7P58062 85 aa8.63□□□□□ -1.03
SNF8-203ENST00000504000 ALMS1Q8TCU4 4167 aa8.62□□□□□ -1.03
SNF8-203ENST00000504000 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
SNF8-203ENST00000504000 MEGF8Q7Z7M0 2845 aa8.61□□□□□ -1.03
SNF8-203ENST00000504000 KRTAP13-2Q52LG2 175 aa8.58□□□□□ -1.04
SNF8-203ENST00000504000 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
SNF8-203ENST00000504000 Q6ZSA8 131 aa8.57□□□□□ -1.04
SNF8-203ENST00000504000 DNAH6Q9C0G6 4158 aa8.57□□□□□ -1.04
SNF8-203ENST00000504000 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
SNF8-203ENST00000504000 TGP01266 2768 aa8.54□□□□□ -1.04
SNF8-203ENST00000504000 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
SNF8-203ENST00000504000 C7orf65Q6ZTY9 151 aa8.53□□□□□ -1.04
SNF8-203ENST00000504000 LY6G6CO95867 125 aa8.52□□□□□ -1.05
SNF8-203ENST00000504000 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
SNF8-203ENST00000504000 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
SNF8-203ENST00000504000 A0A1B0GU69 56 aa8.48□□□□□ -1.05
SNF8-203ENST00000504000 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
SNF8-203ENST00000504000 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
SNF8-203ENST00000504000 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
SNF8-203ENST00000504000 SPINK1P00995 79 aa8.44□□□□□ -1.06
SNF8-203ENST00000504000 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
SNF8-203ENST00000504000 LRP1BQ9NZR2 4599 aa8.43□□□□□ -1.06
SNF8-203ENST00000504000 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
SNF8-203ENST00000504000 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SNF8-203ENST00000504000 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.07
SNF8-203ENST00000504000 PKD1P98161 4303 aa8.4□□□□□ -1.07
SNF8-203ENST00000504000 UQCR11O14957 56 aa8.39□□□□□ -1.07
SNF8-203ENST00000504000 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
SNF8-203ENST00000504000 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
SNF8-203ENST00000504000 FAT2Q9NYQ8 4349 aa8.36□□□□□ -1.07
SNF8-203ENST00000504000 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
SNF8-203ENST00000504000 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
SNF8-203ENST00000504000 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
SNF8-203ENST00000504000 SACSQ9NZJ4 4579 aa8.2□□□□□ -1.1
SNF8-203ENST00000504000 A8MUU9 505 aa8.19□□□□□ -1.1
SNF8-203ENST00000504000 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
SNF8-203ENST00000504000 Q8N1X5 172 aa8.17□□□□□ -1.1
SNF8-203ENST00000504000 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
SNF8-203ENST00000504000 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
SNF8-203ENST00000504000 HYDINQ4G0P3 5121 aa8.14□□□□□ -1.11
SNF8-203ENST00000504000 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
SNF8-203ENST00000504000 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
SNF8-203ENST00000504000 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
SNF8-203ENST00000504000 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
SNF8-203ENST00000504000 C9orf92A6NGG3 77 aa8.02□□□□□ -1.12
SNF8-203ENST00000504000 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.12
SNF8-203ENST00000504000 PKHD1P08F94 4074 aa8.02□□□□□ -1.13
SNF8-203ENST00000504000 H0YAA0 97 aa8.02□□□□□ -1.13
SNF8-203ENST00000504000 A0A1B0GU33 70 aa8□□□□□ -1.13
SNF8-203ENST00000504000 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
SNF8-203ENST00000504000 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
SNF8-203ENST00000504000 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
SNF8-203ENST00000504000 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
SNF8-203ENST00000504000 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.13
SNF8-203ENST00000504000 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
SNF8-203ENST00000504000 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
SNF8-203ENST00000504000 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
SNF8-203ENST00000504000 FAT1Q14517 4588 aa7.88□□□□□ -1.15
SNF8-203ENST00000504000 K7ERS5 55 aa7.81□□□□□ -1.16
SNF8-203ENST00000504000 KRTAP25-1Q3LHN0 102 aa7.8□□□□□ -1.16
SNF8-203ENST00000504000 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
SNF8-203ENST00000504000 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
SNF8-203ENST00000504000 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
SNF8-203ENST00000504000 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
SNF8-203ENST00000504000 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
SNF8-203ENST00000504000 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms