RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 LYRM7Q5U5X0 104 aa13.42□□□□□ -0.26
CCDC149-203ENST00000502801 A0A1B0GVX0 72 aa13.41□□□□□ -0.26
CCDC149-203ENST00000502801 TRBV20-1A0A075B6N2 111 aa13.39□□□□□ -0.27
CCDC149-203ENST00000502801 LOC110117498A0A087WWA1 95 aa13.39□□□□□ -0.27
CCDC149-203ENST00000502801 C8orf87E5RJ46 101 aa13.38□□□□□ -0.27
CCDC149-203ENST00000502801 J3KT08 172 aa13.38□□□□□ -0.27
CCDC149-203ENST00000502801 PDE6GP18545 87 aa13.34□□□□□ -0.27
CCDC149-203ENST00000502801 C14orf132Q9NPU4 83 aa13.34□□□□□ -0.27
CCDC149-203ENST00000502801 KRTAP9-6A0A140TA67 174 aa13.33□□□□□ -0.28
CCDC149-203ENST00000502801 A0A1B0GW54 56 aa13.33□□□□□ -0.28
CCDC149-203ENST00000502801 C9orf118A6NHY6 69 aa13.3□□□□□ -0.28
CCDC149-203ENST00000502801 TAX1BP3O14907 124 aa13.27□□□□□ -0.29
CCDC149-203ENST00000502801 NDUFB1O75438 58 aa13.27□□□□□ -0.29
CCDC149-203ENST00000502801 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
CCDC149-203ENST00000502801 A8MWP4 228 aa13.22□□□□□ -0.29
CCDC149-203ENST00000502801 H3BT86 120 aa13.2□□□□□ -0.3
CCDC149-203ENST00000502801 MTURNQ8N3F0 131 aa13.2□□□□□ -0.3
CCDC149-203ENST00000502801 IGKV3D-7A0A0C4DH55 119 aa13.18□□□□□ -0.3
CCDC149-203ENST00000502801 C8orf17Q9NRJ1 99 aa13.18□□□□□ -0.3
CCDC149-203ENST00000502801 HRES1P13985 223 aa13.17□□□□□ -0.3
CCDC149-203ENST00000502801 NREPQ16612 68 aa13.17□□□□□ -0.3
CCDC149-203ENST00000502801 ZCCHC13Q8WW36 166 aaKnown RBP13.17□□□□□ -0.3
CCDC149-203ENST00000502801 Q8N9P0 234 aaPredicted RBP13.16□□□□□ -0.3
CCDC149-203ENST00000502801 FAM236DA0A1B0GTK5 79 aa13.14□□□□□ -0.31
CCDC149-203ENST00000502801 FAM236CP0DP71 79 aa13.14□□□□□ -0.31
CCDC149-203ENST00000502801 MPLKIPQ8TAP9 179 aa13.14□□□□□ -0.31
CCDC149-203ENST00000502801 RBM12B-AS1Q9P1G2 102 aa13.12□□□□□ -0.31
CCDC149-203ENST00000502801 FSIP2Q5CZC0 6907 aa13.1□□□□□ -0.31
CCDC149-203ENST00000502801 PRR15Q8IV56 129 aa13.1□□□□□ -0.31
CCDC149-203ENST00000502801 CRCT1Q9UGL9 99 aa13.08□□□□□ -0.32
CCDC149-203ENST00000502801 Q6ZVQ6 151 aa13.06□□□□□ -0.32
CCDC149-203ENST00000502801 SPCS1Q9Y6A9 102 aa13.06□□□□□ -0.32
CCDC149-203ENST00000502801 SPINK7P58062 85 aa13.04□□□□□ -0.32
CCDC149-203ENST00000502801 MMP24-AS1A0A0U1RRL7 71 aa13□□□□□ -0.33
CCDC149-203ENST00000502801 KRTAP9-8Q9BYQ0 159 aa12.99□□□□□ -0.33
CCDC149-203ENST00000502801 K7EQZ3 153 aa12.97□□□□□ -0.33
CCDC149-203ENST00000502801 SMCPP49901 116 aaPredicted RBP12.97□□□□□ -0.33
CCDC149-203ENST00000502801 COL5A1-AS1Q5SY13 56 aa12.97□□□□□ -0.33
CCDC149-203ENST00000502801 TMEM254Q8TBM7 123 aa12.97□□□□□ -0.33
CCDC149-203ENST00000502801 MRPL34Q9BQ48 92 aaKnown RBP12.96□□□□□ -0.33
CCDC149-203ENST00000502801 BPY2O14599 106 aa12.93□□□□□ -0.34
CCDC149-203ENST00000502801 hDV103S1A0JD37 113 aa12.91□□□□□ -0.34
CCDC149-203ENST00000502801 PRO0461Q9UI25 63 aa12.87□□□□□ -0.35
CCDC149-203ENST00000502801 WFDC13Q8IUB5 93 aa12.86□□□□□ -0.35
CCDC149-203ENST00000502801 K7EP34 96 aa12.85□□□□□ -0.35
CCDC149-203ENST00000502801 NDUFS5O43920 106 aa12.85□□□□□ -0.35
CCDC149-203ENST00000502801 MT2AP02795 61 aa12.81□□□□□ -0.36
CCDC149-203ENST00000502801 Q8N9L7 120 aa12.81□□□□□ -0.36
CCDC149-203ENST00000502801 LINC00846Q9NV44 126 aa12.76□□□□□ -0.37
CCDC149-203ENST00000502801 CASC2Q6XLA1 102 aa12.74□□□□□ -0.37
CCDC149-203ENST00000502801 UBL5Q9BZL1 73 aa12.72□□□□□ -0.37
CCDC149-203ENST00000502801 MT1FP04733 61 aa12.71□□□□□ -0.37
CCDC149-203ENST00000502801 Q5W150 140 aa12.71□□□□□ -0.37
CCDC149-203ENST00000502801 PCP4L1A6NKN8 68 aa12.7□□□□□ -0.38
CCDC149-203ENST00000502801 GTF2H5Q6ZYL4 71 aa12.69□□□□□ -0.38
CCDC149-203ENST00000502801 HCG22E2RYF7 251 aa12.66□□□□□ -0.38
CCDC149-203ENST00000502801 KRTAP10-10P60014 251 aa12.66□□□□□ -0.38
CCDC149-203ENST00000502801 IGKV2D-30A0A075B6S6 120 aa12.65□□□□□ -0.38
CCDC149-203ENST00000502801 IGKV2-30P06310 120 aa12.65□□□□□ -0.38
CCDC149-203ENST00000502801 F8W1H4 67 aa12.61□□□□□ -0.39
CCDC149-203ENST00000502801 C7orf65Q6ZTY9 151 aa12.61□□□□□ -0.39
CCDC149-203ENST00000502801 CXCL6P80162 114 aa12.57□□□□□ -0.4
CCDC149-203ENST00000502801 ETDBQ3ZM63 59 aa12.57□□□□□ -0.4
CCDC149-203ENST00000502801 KRTAP9-3Q9BYQ3 159 aa12.57□□□□□ -0.4
CCDC149-203ENST00000502801 H1FX-AS1Q4G0G2 97 aa12.56□□□□□ -0.4
CCDC149-203ENST00000502801 USH2AO75445 5202 aa12.56□□□□□ -0.4
CCDC149-203ENST00000502801 LCE2BO14633 110 aa12.51□□□□□ -0.41
CCDC149-203ENST00000502801 C4orf26Q17RF5 130 aa12.44□□□□□ -0.42
CCDC149-203ENST00000502801 SSPOA2VEC9 5147 aa12.43□□□□□ -0.42
CCDC149-203ENST00000502801 TP53AIP1Q9HCN2 124 aa12.35□□□□□ -0.43
CCDC149-203ENST00000502801 ACYP1P07311 99 aa12.27□□□□□ -0.45
CCDC149-203ENST00000502801 KRTAP19-1Q8IUB9 90 aa12.27□□□□□ -0.45
CCDC149-203ENST00000502801 KRTAP3-1Q9BYR8 98 aa12.25□□□□□ -0.45
CCDC149-203ENST00000502801 C1orf64Q8NEQ6 169 aa12.21□□□□□ -0.45
CCDC149-203ENST00000502801 FAM240AA0A1B0GVK7 77 aa12.2□□□□□ -0.46
CCDC149-203ENST00000502801 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.18□□□□□ -0.46
CCDC149-203ENST00000502801 FCGBPQ9Y6R7 5405 aaPredicted RBP12.16□□□□□ -0.46
CCDC149-203ENST00000502801 C5orf47Q569G3 176 aa12.16□□□□□ -0.46
CCDC149-203ENST00000502801 ATP5EP2Q5VTU8 51 aa12.14□□□□□ -0.47
CCDC149-203ENST00000502801 S4R3F8 94 aa12.13□□□□□ -0.47
CCDC149-203ENST00000502801 CYP4F30PQ9H0H9 118 aa12.11□□□□□ -0.47
CCDC149-203ENST00000502801 HIST1H4AP62805 103 aaKnown RBP12.1□□□□□ -0.47
CCDC149-203ENST00000502801 TRAV22A0A0B4J277 110 aa12.09□□□□□ -0.47
CCDC149-203ENST00000502801 LCA10Q71F78 164 aa12.06□□□□□ -0.48
CCDC149-203ENST00000502801 KRTAP19-6Q3LI70 58 aa12.04□□□□□ -0.48
CCDC149-203ENST00000502801 CSAG1Q6PB30 78 aa12.04□□□□□ -0.48
CCDC149-203ENST00000502801 LOC101927531A0A1B0GV80 90 aa12.02□□□□□ -0.49
CCDC149-203ENST00000502801 KRTAP9-7A8MTY7 169 aa12□□□□□ -0.49
CCDC149-203ENST00000502801 A0A1B0GV90 55 aa11.99□□□□□ -0.49
CCDC149-203ENST00000502801 LINC00643Q86TS7 51 aa11.98□□□□□ -0.49
CCDC149-203ENST00000502801 FAM236AA0A1B0GUQ0 79 aa11.97□□□□□ -0.49
CCDC149-203ENST00000502801 FAM236BA0A1B0GV22 79 aa11.97□□□□□ -0.49
CCDC149-203ENST00000502801 UQCRQO14949 82 aa11.97□□□□□ -0.49
CCDC149-203ENST00000502801 A0A087WVE0 104 aa11.95□□□□□ -0.5
CCDC149-203ENST00000502801 H0Y9P7 68 aa11.92□□□□□ -0.5
CCDC149-203ENST00000502801 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
CCDC149-203ENST00000502801 ATOX1O00244 68 aa11.89□□□□□ -0.51
CCDC149-203ENST00000502801 MACF1Q9UPN3 7388 aaKnown RBP11.75□□□□□ -0.53
CCDC149-203ENST00000502801 SPRR2GQ9BYE4 73 aa11.75□□□□□ -0.53
CCDC149-203ENST00000502801 KLKP1Q107X0 134 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms