RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 WWC2-AS2Q96NR7 200 aa11.82□□□□□ -0.52
NKX2-1-202ENST00000498187 A8MU10 97 aa11.81□□□□□ -0.52
NKX2-1-202ENST00000498187 NDUFS5O43920 106 aa11.81□□□□□ -0.52
NKX2-1-202ENST00000498187 ANAPC11Q9NYG5 84 aa11.79□□□□□ -0.52
NKX2-1-202ENST00000498187 MRPL34Q9BQ48 92 aaKnown RBP11.78□□□□□ -0.52
NKX2-1-202ENST00000498187 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
NKX2-1-202ENST00000498187 A6NED7 52 aa11.76□□□□□ -0.53
NKX2-1-202ENST00000498187 ZNF861PO60384 105 aa11.76□□□□□ -0.53
NKX2-1-202ENST00000498187 LINC01558Q9Y6Z2 57 aa11.74□□□□□ -0.53
NKX2-1-202ENST00000498187 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
NKX2-1-202ENST00000498187 ATP11AUNQ6ZP68 121 aa11.72□□□□□ -0.53
NKX2-1-202ENST00000498187 LCA10Q71F78 164 aa11.72□□□□□ -0.53
NKX2-1-202ENST00000498187 DNAH8Q96JB1 4490 aa11.71□□□□□ -0.54
NKX2-1-202ENST00000498187 SPAG11AQ6PDA7 123 aa11.7□□□□□ -0.54
NKX2-1-202ENST00000498187 SPTSSBQ8NFR3 76 aa11.69□□□□□ -0.54
NKX2-1-202ENST00000498187 DNAH17Q9UFH2 4485 aa11.68□□□□□ -0.54
NKX2-1-202ENST00000498187 HRES1P13985 223 aa11.68□□□□□ -0.54
NKX2-1-202ENST00000498187 FRAS1Q86XX4 4008 aa11.68□□□□□ -0.54
NKX2-1-202ENST00000498187 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
NKX2-1-202ENST00000498187 CDC42SE1Q9NRR8 79 aa11.66□□□□□ -0.54
NKX2-1-202ENST00000498187 DNAH2Q9P225 4427 aa11.66□□□□□ -0.54
NKX2-1-202ENST00000498187 A0A087X002 238 aa11.66□□□□□ -0.54
NKX2-1-202ENST00000498187 NOTCH2NLQ7Z3S9 236 aa11.66□□□□□ -0.54
NKX2-1-202ENST00000498187 C1orf134Q5TEV5 83 aa11.63□□□□□ -0.55
NKX2-1-202ENST00000498187 IGLV7-43P04211 117 aa11.62□□□□□ -0.55
NKX2-1-202ENST00000498187 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
NKX2-1-202ENST00000498187 KTN1-AS1Q86SY8 53 aa11.6□□□□□ -0.55
NKX2-1-202ENST00000498187 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
NKX2-1-202ENST00000498187 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
NKX2-1-202ENST00000498187 H3BS24 57 aa11.55□□□□□ -0.56
NKX2-1-202ENST00000498187 Q5W150 140 aa11.55□□□□□ -0.56
NKX2-1-202ENST00000498187 A6NN06 94 aa11.54□□□□□ -0.56
NKX2-1-202ENST00000498187 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
NKX2-1-202ENST00000498187 LY6G6CO95867 125 aa11.52□□□□□ -0.57
NKX2-1-202ENST00000498187 C8orf87E5RJ46 101 aa11.5□□□□□ -0.57
NKX2-1-202ENST00000498187 ACYP2P14621 99 aa11.5□□□□□ -0.57
NKX2-1-202ENST00000498187 SPINK7P58062 85 aa11.5□□□□□ -0.57
NKX2-1-202ENST00000498187 PRR26Q8N8Z3 221 aa11.48□□□□□ -0.57
NKX2-1-202ENST00000498187 SSBP3-AS1Q7Z2R9 100 aa11.47□□□□□ -0.57
NKX2-1-202ENST00000498187 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
NKX2-1-202ENST00000498187 ALMS1Q8TCU4 4167 aa11.45□□□□□ -0.58
NKX2-1-202ENST00000498187 DNAH6Q9C0G6 4158 aa11.42□□□□□ -0.58
NKX2-1-202ENST00000498187 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
NKX2-1-202ENST00000498187 DMAC1Q96GE9 116 aa11.4□□□□□ -0.59
NKX2-1-202ENST00000498187 FAM229AH3BQW9 127 aa11.39□□□□□ -0.59
NKX2-1-202ENST00000498187 LINC00313P59037 77 aa11.38□□□□□ -0.59
NKX2-1-202ENST00000498187 DNAH5Q8TE73 4624 aa11.38□□□□□ -0.59
NKX2-1-202ENST00000498187 C7orf65Q6ZTY9 151 aa11.38□□□□□ -0.59
NKX2-1-202ENST00000498187 KRTAP13-2Q52LG2 175 aa11.35□□□□□ -0.59
NKX2-1-202ENST00000498187 HYDINQ4G0P3 5121 aa11.34□□□□□ -0.59
NKX2-1-202ENST00000498187 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
NKX2-1-202ENST00000498187 IGKV2-30P06310 120 aa11.3□□□□□ -0.6
NKX2-1-202ENST00000498187 Q6ZSA8 131 aa11.3□□□□□ -0.6
NKX2-1-202ENST00000498187 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.61
NKX2-1-202ENST00000498187 A0A1B0GU69 56 aa11.26□□□□□ -0.61
NKX2-1-202ENST00000498187 SACSQ9NZJ4 4579 aa11.23□□□□□ -0.61
NKX2-1-202ENST00000498187 LRP1BQ9NZR2 4599 aa11.22□□□□□ -0.61
NKX2-1-202ENST00000498187 KRTAP1-4P0C5Y4 121 aa11.21□□□□□ -0.61
NKX2-1-202ENST00000498187 PKD1P98161 4303 aa11.19□□□□□ -0.62
NKX2-1-202ENST00000498187 KRTAP16-1A8MUX0 517 aa11.19□□□□□ -0.62
NKX2-1-202ENST00000498187 KMT2CQ8NEZ4 4911 aaKnown RBP11.16□□□□□ -0.62
NKX2-1-202ENST00000498187 SPATA8Q6RVD6 105 aa11.15□□□□□ -0.62
NKX2-1-202ENST00000498187 FAT2Q9NYQ8 4349 aa11.14□□□□□ -0.63
NKX2-1-202ENST00000498187 IGKV2D-30A0A075B6S6 120 aa11.11□□□□□ -0.63
NKX2-1-202ENST00000498187 UQCR11O14957 56 aa11.1□□□□□ -0.63
NKX2-1-202ENST00000498187 PLA2G1BP04054 148 aaKnown RBP11.09□□□□□ -0.63
NKX2-1-202ENST00000498187 MIR22HGQ0VDD5 57 aa11.08□□□□□ -0.64
NKX2-1-202ENST00000498187 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
NKX2-1-202ENST00000498187 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
NKX2-1-202ENST00000498187 RYR2Q92736 4967 aa11.04□□□□□ -0.64
NKX2-1-202ENST00000498187 SPINK1P00995 79 aa11.02□□□□□ -0.64
NKX2-1-202ENST00000498187 PRAC1Q96KF2 57 aa10.98□□□□□ -0.65
NKX2-1-202ENST00000498187 ADM2Q7Z4H4 148 aa10.93□□□□□ -0.66
NKX2-1-202ENST00000498187 RYR3Q15413 4870 aa10.93□□□□□ -0.66
NKX2-1-202ENST00000498187 LINC00304Q8N9R0 145 aa10.91□□□□□ -0.66
NKX2-1-202ENST00000498187 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
NKX2-1-202ENST00000498187 RPS29P62273 56 aaKnown RBP10.85□□□□□ -0.67
NKX2-1-202ENST00000498187 Q8N1X5 172 aa10.84□□□□□ -0.67
NKX2-1-202ENST00000498187 SMR3BP02814 79 aaPredicted RBP10.82□□□□□ -0.68
NKX2-1-202ENST00000498187 LINC01554Q52M75 96 aa10.81□□□□□ -0.68
NKX2-1-202ENST00000498187 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
NKX2-1-202ENST00000498187 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
NKX2-1-202ENST00000498187 C9orf92A6NGG3 77 aa10.73□□□□□ -0.69
NKX2-1-202ENST00000498187 A8MUU9 505 aa10.67□□□□□ -0.7
NKX2-1-202ENST00000498187 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
NKX2-1-202ENST00000498187 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
NKX2-1-202ENST00000498187 KRTAP10-4P60372 401 aaPredicted RBP10.66□□□□□ -0.7
NKX2-1-202ENST00000498187 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
NKX2-1-202ENST00000498187 FAT1Q14517 4588 aa10.61□□□□□ -0.71
NKX2-1-202ENST00000498187 H0YAA0 97 aa10.61□□□□□ -0.71
NKX2-1-202ENST00000498187 APOBP04114 4563 aaKnown RBP10.59□□□□□ -0.71
NKX2-1-202ENST00000498187 A0A1B0GU33 70 aa10.58□□□□□ -0.72
NKX2-1-202ENST00000498187 KRTAP3-1Q9BYR8 98 aa10.57□□□□□ -0.72
NKX2-1-202ENST00000498187 EPPK1P58107 5090 aaKnown RBP10.54□□□□□ -0.72
NKX2-1-202ENST00000498187 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
NKX2-1-202ENST00000498187 FLG2Q5D862 2391 aaPredicted RBP10.41□□□□□ -0.74
NKX2-1-202ENST00000498187 COX6B2Q6YFQ2 88 aa10.4□□□□□ -0.74
NKX2-1-202ENST00000498187 HSPG2P98160 4391 aa10.39□□□□□ -0.75
NKX2-1-202ENST00000498187 A0A0A0MQY5 61 aa10.39□□□□□ -0.75
NKX2-1-202ENST00000498187 KRTAP25-1Q3LHN0 102 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms