RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 ATP5EP2Q5VTU8 51 aa13.47□□□□□ -0.25
TNFRSF4-203ENST00000497869 NOTCH2NLQ7Z3S9 236 aa13.47□□□□□ -0.25
TNFRSF4-203ENST00000497869 PRR15Q8IV56 129 aa13.44□□□□□ -0.26
TNFRSF4-203ENST00000497869 A0A1B0GVX0 72 aa13.43□□□□□ -0.26
TNFRSF4-203ENST00000497869 FP248Q71RG6 208 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF4-203ENST00000497869 HMCN2Q8NDA2 5059 aa13.42□□□□□ -0.26
TNFRSF4-203ENST00000497869 IGHV6-1A0A0B4J1U7 121 aa13.42□□□□□ -0.26
TNFRSF4-203ENST00000497869 PRR4Q16378 134 aa13.42□□□□□ -0.26
TNFRSF4-203ENST00000497869 LPAP08519 4548 aa13.41□□□□□ -0.26
TNFRSF4-203ENST00000497869 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
TNFRSF4-203ENST00000497869 A0A087WVE0 104 aa13.37□□□□□ -0.27
TNFRSF4-203ENST00000497869 NDUFB1O75438 58 aa13.36□□□□□ -0.27
TNFRSF4-203ENST00000497869 HIST1H4AP62805 103 aaKnown RBP13.35□□□□□ -0.27
TNFRSF4-203ENST00000497869 MMP24-AS1A0A0U1RRL7 71 aa13.33□□□□□ -0.27
TNFRSF4-203ENST00000497869 C9orf92A6NGG3 77 aa13.33□□□□□ -0.27
TNFRSF4-203ENST00000497869 C8orf17Q9NRJ1 99 aa13.33□□□□□ -0.28
TNFRSF4-203ENST00000497869 KRTAP13-3Q3SY46 172 aa13.31□□□□□ -0.28
TNFRSF4-203ENST00000497869 KRTAP16-1A8MUX0 517 aa13.28□□□□□ -0.28
TNFRSF4-203ENST00000497869 LINC00313P59037 77 aa13.28□□□□□ -0.28
TNFRSF4-203ENST00000497869 C8orf87E5RJ46 101 aa13.25□□□□□ -0.29
TNFRSF4-203ENST00000497869 WFDC13Q8IUB5 93 aa13.25□□□□□ -0.29
TNFRSF4-203ENST00000497869 IMUPQ9GZP8 106 aa13.25□□□□□ -0.29
TNFRSF4-203ENST00000497869 LRP2P98164 4655 aa13.24□□□□□ -0.29
TNFRSF4-203ENST00000497869 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
TNFRSF4-203ENST00000497869 TPRXLQ17RH7 258 aa13.21□□□□□ -0.3
TNFRSF4-203ENST00000497869 hDV103S1A0JD37 113 aa13.19□□□□□ -0.3
TNFRSF4-203ENST00000497869 CASC2Q6XLA1 102 aa13.19□□□□□ -0.3
TNFRSF4-203ENST00000497869 XP32Q5T750 250 aa13.16□□□□□ -0.3
TNFRSF4-203ENST00000497869 TMEM254Q8TBM7 123 aa13.14□□□□□ -0.31
TNFRSF4-203ENST00000497869 MRPL34Q9BQ48 92 aaKnown RBP13.13□□□□□ -0.31
TNFRSF4-203ENST00000497869 Q8N9P0 234 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF4-203ENST00000497869 FAM236AA0A1B0GUQ0 79 aa13.08□□□□□ -0.32
TNFRSF4-203ENST00000497869 FAM236BA0A1B0GV22 79 aa13.08□□□□□ -0.32
TNFRSF4-203ENST00000497869 C20orf166-AS1Q96NR2 134 aa13.08□□□□□ -0.32
TNFRSF4-203ENST00000497869 A8MUU9 505 aa13.07□□□□□ -0.32
TNFRSF4-203ENST00000497869 Q75L30 129 aa13□□□□□ -0.33
TNFRSF4-203ENST00000497869 NDUFS5O43920 106 aa12.98□□□□□ -0.33
TNFRSF4-203ENST00000497869 RPL37P61927 97 aaKnown RBP12.98□□□□□ -0.33
TNFRSF4-203ENST00000497869 SCGB1A1P11684 91 aa12.95□□□□□ -0.34
TNFRSF4-203ENST00000497869 OCR1Q9BZK8 76 aa12.95□□□□□ -0.34
TNFRSF4-203ENST00000497869 Q5W150 140 aa12.93□□□□□ -0.34
TNFRSF4-203ENST00000497869 MUC17Q685J3 4493 aa12.92□□□□□ -0.34
TNFRSF4-203ENST00000497869 UBR4Q5T4S7 5183 aa12.87□□□□□ -0.35
TNFRSF4-203ENST00000497869 ZCCHC13Q8WW36 166 aaKnown RBP12.85□□□□□ -0.35
TNFRSF4-203ENST00000497869 TP53AIP1Q9HCN2 124 aa12.84□□□□□ -0.35
TNFRSF4-203ENST00000497869 ATOX1O00244 68 aa12.83□□□□□ -0.36
TNFRSF4-203ENST00000497869 PCOTHQ58A44 107 aa12.83□□□□□ -0.36
TNFRSF4-203ENST00000497869 UQCRQO14949 82 aa12.79□□□□□ -0.36
TNFRSF4-203ENST00000497869 ATP11AUNQ6ZP68 121 aa12.79□□□□□ -0.36
TNFRSF4-203ENST00000497869 TRAV7A0A075B6U4 112 aa12.76□□□□□ -0.37
TNFRSF4-203ENST00000497869 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
TNFRSF4-203ENST00000497869 TRAV22A0A0B4J277 110 aa12.73□□□□□ -0.37
TNFRSF4-203ENST00000497869 SEC61BP60468 96 aaKnown RBP12.71□□□□□ -0.37
TNFRSF4-203ENST00000497869 SERP2Q8N6R1 65 aa12.71□□□□□ -0.38
TNFRSF4-203ENST00000497869 KRTAP4-1Q9BYQ7 146 aa12.71□□□□□ -0.38
TNFRSF4-203ENST00000497869 H0Y9P7 68 aa12.7□□□□□ -0.38
TNFRSF4-203ENST00000497869 MUC2Q02817 5179 aa12.69□□□□□ -0.38
TNFRSF4-203ENST00000497869 ANAPC13Q9BS18 74 aa12.68□□□□□ -0.38
TNFRSF4-203ENST00000497869 RNF213Q63HN8 5207 aa12.67□□□□□ -0.38
TNFRSF4-203ENST00000497869 PCP4P48539 62 aa12.65□□□□□ -0.38
TNFRSF4-203ENST00000497869 C5orf47Q569G3 176 aa12.65□□□□□ -0.38
TNFRSF4-203ENST00000497869 IGKV2-30P06310 120 aa12.59□□□□□ -0.39
TNFRSF4-203ENST00000497869 COX7CP15954 63 aa12.59□□□□□ -0.39
TNFRSF4-203ENST00000497869 SPINK7P58062 85 aa12.59□□□□□ -0.39
TNFRSF4-203ENST00000497869 LINC00208Q96KT6 92 aa12.59□□□□□ -0.39
TNFRSF4-203ENST00000497869 IGKV2D-30A0A075B6S6 120 aa12.59□□□□□ -0.39
TNFRSF4-203ENST00000497869 MP68P56378 58 aa12.57□□□□□ -0.4
TNFRSF4-203ENST00000497869 C1orf64Q8NEQ6 169 aa12.57□□□□□ -0.4
TNFRSF4-203ENST00000497869 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
TNFRSF4-203ENST00000497869 CYP4F30PQ9H0H9 118 aa12.54□□□□□ -0.4
TNFRSF4-203ENST00000497869 C20orf197Q8N268 126 aa12.53□□□□□ -0.4
TNFRSF4-203ENST00000497869 LOC101927531A0A1B0GV80 90 aa12.51□□□□□ -0.41
TNFRSF4-203ENST00000497869 SNURFQ9Y675 71 aa12.51□□□□□ -0.41
TNFRSF4-203ENST00000497869 C7orf65Q6ZTY9 151 aa12.51□□□□□ -0.41
TNFRSF4-203ENST00000497869 H3BPC8 53 aa12.48□□□□□ -0.41
TNFRSF4-203ENST00000497869 CCDC179H3BU77 68 aa12.48□□□□□ -0.41
TNFRSF4-203ENST00000497869 KLKP1Q107X0 134 aa12.47□□□□□ -0.41
TNFRSF4-203ENST00000497869 CYSTM1Q9H1C7 97 aa12.46□□□□□ -0.41
TNFRSF4-203ENST00000497869 HRES1P13985 223 aa12.45□□□□□ -0.42
TNFRSF4-203ENST00000497869 MPLKIPQ8TAP9 179 aa12.37□□□□□ -0.43
TNFRSF4-203ENST00000497869 C4orf26Q17RF5 130 aa12.33□□□□□ -0.44
TNFRSF4-203ENST00000497869 KRTAP19-2Q3LHN2 52 aa12.3□□□□□ -0.44
TNFRSF4-203ENST00000497869 H7BZZ5 65 aa12.25□□□□□ -0.45
TNFRSF4-203ENST00000497869 KRTAP3-1Q9BYR8 98 aa12.25□□□□□ -0.45
TNFRSF4-203ENST00000497869 FAT4Q6V0I7 4981 aa12.22□□□□□ -0.45
TNFRSF4-203ENST00000497869 NDUFC1O43677 76 aa12.19□□□□□ -0.46
TNFRSF4-203ENST00000497869 COX6B2Q6YFQ2 88 aa12.18□□□□□ -0.46
TNFRSF4-203ENST00000497869 LCE2CQ5TA81 110 aa12.15□□□□□ -0.46
TNFRSF4-203ENST00000497869 RBM12B-AS1Q9P1G2 102 aa12.14□□□□□ -0.47
TNFRSF4-203ENST00000497869 SPANXA2-OT1Q8N9U9 137 aa12.07□□□□□ -0.48
TNFRSF4-203ENST00000497869 FAM236DA0A1B0GTK5 79 aa12.06□□□□□ -0.48
TNFRSF4-203ENST00000497869 FAM236CP0DP71 79 aa12.06□□□□□ -0.48
TNFRSF4-203ENST00000497869 FLGP20930 4061 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF4-203ENST00000497869 DMAC1Q96GE9 116 aa12.04□□□□□ -0.48
TNFRSF4-203ENST00000497869 H1FX-AS1Q4G0G2 97 aa11.98□□□□□ -0.49
TNFRSF4-203ENST00000497869 TMEM258P61165 79 aa11.97□□□□□ -0.49
TNFRSF4-203ENST00000497869 A8MUN3 132 aa11.94□□□□□ -0.5
TNFRSF4-203ENST00000497869 MT1HP80294 61 aa11.88□□□□□ -0.51
TNFRSF4-203ENST00000497869 ATP5EP56381 51 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF4-203ENST00000497869 ACYP2P14621 99 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms