RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 C1orf195Q5TG92 126 aa5.26□□□□□ -1.57
PTPN3-206ENST00000497739 ANKRD29Q8N6D5 301 aa5.26□□□□□ -1.57
PTPN3-206ENST00000497739 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
PTPN3-206ENST00000497739 TRACP01848 142 aa5.25□□□□□ -1.57
PTPN3-206ENST00000497739 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
PTPN3-206ENST00000497739 Q6Q795 121 aa5.24□□□□□ -1.57
PTPN3-206ENST00000497739 A0A087WSZ3 146 aa5.23□□□□□ -1.57
PTPN3-206ENST00000497739 ATXN8Q156A1 80 aa5.23□□□□□ -1.57
PTPN3-206ENST00000497739 DSCR8Q96T75 97 aa5.23□□□□□ -1.57
PTPN3-206ENST00000497739 VPS25Q9BRG1 176 aa5.23□□□□□ -1.57
PTPN3-206ENST00000497739 CCKP06307 115 aa5.21□□□□□ -1.58
PTPN3-206ENST00000497739 SIGMAR1Q99720 223 aa5.21□□□□□ -1.58
PTPN3-206ENST00000497739 RBM3P98179 157 aaKnown RBP5.2□□□□□ -1.58
PTPN3-206ENST00000497739 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
PTPN3-206ENST00000497739 BAALC-AS2P0C853 105 aa5.19□□□□□ -1.58
PTPN3-206ENST00000497739 NAA38Q9BRA0 125 aaKnown RBP5.19□□□□□ -1.58
PTPN3-206ENST00000497739 TRBV20-1A0A075B6N2 111 aa5.18□□□□□ -1.58
PTPN3-206ENST00000497739 C9JAW5 83 aa5.18□□□□□ -1.58
PTPN3-206ENST00000497739 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
PTPN3-206ENST00000497739 LOC105371267A0A1B0GV96 52 aa5.17□□□□□ -1.58
PTPN3-206ENST00000497739 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
PTPN3-206ENST00000497739 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
PTPN3-206ENST00000497739 OBSCN-AS1Q96MR7 158 aa5.17□□□□□ -1.58
PTPN3-206ENST00000497739 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
PTPN3-206ENST00000497739 A0A1W2PNM2 257 aa5.15□□□□□ -1.59
PTPN3-206ENST00000497739 IGKV4-1P06312 121 aa5.15□□□□□ -1.59
PTPN3-206ENST00000497739 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.59
PTPN3-206ENST00000497739 Q96NJ1 140 aa5.15□□□□□ -1.59
PTPN3-206ENST00000497739 PDE6GP18545 87 aa5.13□□□□□ -1.59
PTPN3-206ENST00000497739 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
PTPN3-206ENST00000497739 MT1HP80294 61 aa5.12□□□□□ -1.59
PTPN3-206ENST00000497739 Q6ZVQ6 151 aa5.12□□□□□ -1.59
PTPN3-206ENST00000497739 A0A1W2PPM0 123 aa5.1□□□□□ -1.59
PTPN3-206ENST00000497739 J3KT08 172 aa5.1□□□□□ -1.59
PTPN3-206ENST00000497739 LINC00313P59037 77 aa5.1□□□□□ -1.59
PTPN3-206ENST00000497739 IGHV6-1A0A0B4J1U7 121 aa5.09□□□□□ -1.59
PTPN3-206ENST00000497739 NDUFB1O75438 58 aa5.09□□□□□ -1.59
PTPN3-206ENST00000497739 DEFB116Q30KQ4 102 aa5.09□□□□□ -1.59
PTPN3-206ENST00000497739 COX6B2Q6YFQ2 88 aa5.09□□□□□ -1.59
PTPN3-206ENST00000497739 C14orf132Q9NPU4 83 aa5.09□□□□□ -1.59
PTPN3-206ENST00000497739 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.6
PTPN3-206ENST00000497739 A0A1B0GW54 56 aa5.08□□□□□ -1.6
PTPN3-206ENST00000497739 H3BT86 120 aa5.08□□□□□ -1.6
PTPN3-206ENST00000497739 DSCR10P59022 87 aa5.08□□□□□ -1.6
PTPN3-206ENST00000497739 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
PTPN3-206ENST00000497739 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
PTPN3-206ENST00000497739 LOC110117498A0A087WWA1 95 aa5.07□□□□□ -1.6
PTPN3-206ENST00000497739 COL5A1-AS1Q5SY13 56 aa5.07□□□□□ -1.6
PTPN3-206ENST00000497739 SPCS1Q9Y6A9 102 aa5.07□□□□□ -1.6
PTPN3-206ENST00000497739 C8orf87E5RJ46 101 aa5.06□□□□□ -1.6
PTPN3-206ENST00000497739 TAX1BP3O14907 124 aa5.06□□□□□ -1.6
PTPN3-206ENST00000497739 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
PTPN3-206ENST00000497739 Q6ZQT0 140 aa5.06□□□□□ -1.6
PTPN3-206ENST00000497739 NREPQ16612 68 aa5.05□□□□□ -1.6
PTPN3-206ENST00000497739 LINC00472Q9H8W2 130 aa5.05□□□□□ -1.6
PTPN3-206ENST00000497739 A0A1B0GVX0 72 aa5.04□□□□□ -1.6
PTPN3-206ENST00000497739 MTURNQ8N3F0 131 aa5.04□□□□□ -1.6
PTPN3-206ENST00000497739 PCP4L1A6NKN8 68 aa5.03□□□□□ -1.6
PTPN3-206ENST00000497739 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
PTPN3-206ENST00000497739 USH2AO75445 5202 aa5.03□□□□□ -1.6
PTPN3-206ENST00000497739 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
PTPN3-206ENST00000497739 A8MUU9 505 aa5.01□□□□□ -1.61
PTPN3-206ENST00000497739 GTF2H5Q6ZYL4 71 aa5□□□□□ -1.61
PTPN3-206ENST00000497739 A8MWP4 228 aa4.99□□□□□ -1.61
PTPN3-206ENST00000497739 M0R2T5 61 aa4.99□□□□□ -1.61
PTPN3-206ENST00000497739 K7EP34 96 aa4.97□□□□□ -1.61
PTPN3-206ENST00000497739 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
PTPN3-206ENST00000497739 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
PTPN3-206ENST00000497739 BPY2O14599 106 aa4.96□□□□□ -1.62
PTPN3-206ENST00000497739 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
PTPN3-206ENST00000497739 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
PTPN3-206ENST00000497739 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
PTPN3-206ENST00000497739 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
PTPN3-206ENST00000497739 RBM12B-AS1Q9P1G2 102 aa4.95□□□□□ -1.62
PTPN3-206ENST00000497739 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
PTPN3-206ENST00000497739 NDUFS5O43920 106 aa4.94□□□□□ -1.62
PTPN3-206ENST00000497739 PRR15Q8IV56 129 aa4.93□□□□□ -1.62
PTPN3-206ENST00000497739 IGKV3D-7A0A0C4DH55 119 aa4.92□□□□□ -1.62
PTPN3-206ENST00000497739 ZCCHC13Q8WW36 166 aaKnown RBP4.92□□□□□ -1.62
PTPN3-206ENST00000497739 F8W1H4 67 aa4.91□□□□□ -1.62
PTPN3-206ENST00000497739 hDV103S1A0JD37 113 aa4.9□□□□□ -1.63
PTPN3-206ENST00000497739 K7EQZ3 153 aa4.9□□□□□ -1.63
PTPN3-206ENST00000497739 TMEM254Q8TBM7 123 aa4.89□□□□□ -1.63
PTPN3-206ENST00000497739 MRPL34Q9BQ48 92 aaKnown RBP4.89□□□□□ -1.63
PTPN3-206ENST00000497739 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
PTPN3-206ENST00000497739 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
PTPN3-206ENST00000497739 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
PTPN3-206ENST00000497739 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
PTPN3-206ENST00000497739 CASC2Q6XLA1 102 aa4.86□□□□□ -1.63
PTPN3-206ENST00000497739 WFDC13Q8IUB5 93 aa4.86□□□□□ -1.63
PTPN3-206ENST00000497739 PRO0461Q9UI25 63 aa4.86□□□□□ -1.63
PTPN3-206ENST00000497739 SPINK7P58062 85 aa4.85□□□□□ -1.63
PTPN3-206ENST00000497739 ETDBQ3ZM63 59 aa4.85□□□□□ -1.63
PTPN3-206ENST00000497739 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
PTPN3-206ENST00000497739 Q8N9L7 120 aa4.83□□□□□ -1.64
PTPN3-206ENST00000497739 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
PTPN3-206ENST00000497739 ACYP1P07311 99 aa4.79□□□□□ -1.64
PTPN3-206ENST00000497739 HRES1P13985 223 aa4.79□□□□□ -1.64
PTPN3-206ENST00000497739 CXCL6P80162 114 aa4.79□□□□□ -1.64
PTPN3-206ENST00000497739 C7orf65Q6ZTY9 151 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms