RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 ALMS1Q8TCU4 4167 aa8.87□□□□□ -0.99
UBXN11-216ENST00000496466 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
UBXN11-216ENST00000496466 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
UBXN11-216ENST00000496466 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
UBXN11-216ENST00000496466 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
UBXN11-216ENST00000496466 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
UBXN11-216ENST00000496466 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
UBXN11-216ENST00000496466 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
UBXN11-216ENST00000496466 HYDINQ4G0P3 5121 aa8.84□□□□□ -0.99
UBXN11-216ENST00000496466 LIMD2Q9BT23 127 aa8.84□□□□□ -0.99
UBXN11-216ENST00000496466 TP53AIP1Q9HCN2 124 aa8.84□□□□□ -0.99
UBXN11-216ENST00000496466 CDK2AP2O75956 126 aa8.83□□□□□ -1
UBXN11-216ENST00000496466 KRTAP10-1P60331 282 aa8.82□□□□□ -1
UBXN11-216ENST00000496466 Q8N9P0 234 aaPredicted RBP8.82□□□□□ -1
UBXN11-216ENST00000496466 A8MU10 97 aa8.81□□□□□ -1
UBXN11-216ENST00000496466 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
UBXN11-216ENST00000496466 A0A087X002 238 aa8.8□□□□□ -1
UBXN11-216ENST00000496466 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
UBXN11-216ENST00000496466 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
UBXN11-216ENST00000496466 PKD1P98161 4303 aa8.78□□□□□ -1
UBXN11-216ENST00000496466 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
UBXN11-216ENST00000496466 NDUFS5O43920 106 aa8.78□□□□□ -1
UBXN11-216ENST00000496466 FAT2Q9NYQ8 4349 aa8.78□□□□□ -1
UBXN11-216ENST00000496466 Q6ZSA8 131 aa8.77□□□□□ -1
UBXN11-216ENST00000496466 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
UBXN11-216ENST00000496466 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
UBXN11-216ENST00000496466 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
UBXN11-216ENST00000496466 Q75L30 129 aa8.75□□□□□ -1.01
UBXN11-216ENST00000496466 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
UBXN11-216ENST00000496466 PRR15LQ9BU68 103 aa8.74□□□□□ -1.01
UBXN11-216ENST00000496466 SSBP3-AS1Q7Z2R9 100 aa8.74□□□□□ -1.01
UBXN11-216ENST00000496466 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
UBXN11-216ENST00000496466 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.02
UBXN11-216ENST00000496466 LCA10Q71F78 164 aa8.7□□□□□ -1.02
UBXN11-216ENST00000496466 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
UBXN11-216ENST00000496466 A6NN06 94 aa8.69□□□□□ -1.02
UBXN11-216ENST00000496466 COA5Q86WW8 74 aa8.68□□□□□ -1.02
UBXN11-216ENST00000496466 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
UBXN11-216ENST00000496466 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
UBXN11-216ENST00000496466 A6NED7 52 aa8.65□□□□□ -1.02
UBXN11-216ENST00000496466 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
UBXN11-216ENST00000496466 Q5W150 140 aa8.65□□□□□ -1.03
UBXN11-216ENST00000496466 KRTAP13-3Q3SY46 172 aa8.64□□□□□ -1.03
UBXN11-216ENST00000496466 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
UBXN11-216ENST00000496466 SACSQ9NZJ4 4579 aa8.61□□□□□ -1.03
UBXN11-216ENST00000496466 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
UBXN11-216ENST00000496466 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
UBXN11-216ENST00000496466 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
UBXN11-216ENST00000496466 VPS13BQ7Z7G8 4022 aa8.58□□□□□ -1.04
UBXN11-216ENST00000496466 LINC00313P59037 77 aa8.58□□□□□ -1.04
UBXN11-216ENST00000496466 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
UBXN11-216ENST00000496466 HRES1P13985 223 aa8.57□□□□□ -1.04
UBXN11-216ENST00000496466 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
UBXN11-216ENST00000496466 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
UBXN11-216ENST00000496466 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
UBXN11-216ENST00000496466 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
UBXN11-216ENST00000496466 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
UBXN11-216ENST00000496466 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
UBXN11-216ENST00000496466 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
UBXN11-216ENST00000496466 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
UBXN11-216ENST00000496466 SPINK7P58062 85 aa8.45□□□□□ -1.06
UBXN11-216ENST00000496466 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
UBXN11-216ENST00000496466 KMT2CQ8NEZ4 4911 aaKnown RBP8.45□□□□□ -1.06
UBXN11-216ENST00000496466 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
UBXN11-216ENST00000496466 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
UBXN11-216ENST00000496466 ACYP2P14621 99 aa8.42□□□□□ -1.06
UBXN11-216ENST00000496466 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
UBXN11-216ENST00000496466 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
UBXN11-216ENST00000496466 RYR2Q92736 4967 aa8.41□□□□□ -1.06
UBXN11-216ENST00000496466 SPINK1P00995 79 aa8.4□□□□□ -1.06
UBXN11-216ENST00000496466 APOBP04114 4563 aaKnown RBP8.36□□□□□ -1.07
UBXN11-216ENST00000496466 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
UBXN11-216ENST00000496466 FAT1Q14517 4588 aa8.33□□□□□ -1.08
UBXN11-216ENST00000496466 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
UBXN11-216ENST00000496466 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
UBXN11-216ENST00000496466 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
UBXN11-216ENST00000496466 RYR3Q15413 4870 aa8.25□□□□□ -1.09
UBXN11-216ENST00000496466 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
UBXN11-216ENST00000496466 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
UBXN11-216ENST00000496466 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
UBXN11-216ENST00000496466 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
UBXN11-216ENST00000496466 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
UBXN11-216ENST00000496466 A0A1B0GU69 56 aa8.17□□□□□ -1.1
UBXN11-216ENST00000496466 C9orf92A6NGG3 77 aa8.14□□□□□ -1.11
UBXN11-216ENST00000496466 A8MUU9 505 aa8.13□□□□□ -1.11
UBXN11-216ENST00000496466 Q8N1X5 172 aa8.12□□□□□ -1.11
UBXN11-216ENST00000496466 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
UBXN11-216ENST00000496466 Q5VSD8 79 aa8.08□□□□□ -1.12
UBXN11-216ENST00000496466 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
UBXN11-216ENST00000496466 HSPG2P98160 4391 aa8.07□□□□□ -1.12
UBXN11-216ENST00000496466 UQCR11O14957 56 aa8.07□□□□□ -1.12
UBXN11-216ENST00000496466 FLG2Q5D862 2391 aaPredicted RBP8.04□□□□□ -1.12
UBXN11-216ENST00000496466 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
UBXN11-216ENST00000496466 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
UBXN11-216ENST00000496466 H3BS24 57 aa8.02□□□□□ -1.13
UBXN11-216ENST00000496466 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
UBXN11-216ENST00000496466 TNXBP22105 4242 aa8□□□□□ -1.13
UBXN11-216ENST00000496466 RYR1P21817 5038 aa8□□□□□ -1.13
UBXN11-216ENST00000496466 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
UBXN11-216ENST00000496466 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 307.5 ms