RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
BRD9-213ENST00000495794 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
BRD9-213ENST00000495794 MUC3AQ02505 3323 aa8.18□□□□□ -1.1
BRD9-213ENST00000495794 A0A087X002 238 aa8.17□□□□□ -1.1
BRD9-213ENST00000495794 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
BRD9-213ENST00000495794 RELNP78509 3460 aa8.17□□□□□ -1.1
BRD9-213ENST00000495794 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
BRD9-213ENST00000495794 DMDP11532 3685 aa8.16□□□□□ -1.1
BRD9-213ENST00000495794 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
BRD9-213ENST00000495794 Q5VSD8 79 aa8.14□□□□□ -1.11
BRD9-213ENST00000495794 S4R3F8 94 aa8.14□□□□□ -1.11
BRD9-213ENST00000495794 LAMA5O15230 3695 aa8.13□□□□□ -1.11
BRD9-213ENST00000495794 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
BRD9-213ENST00000495794 NOTCH2NLQ7Z3S9 236 aa8.12□□□□□ -1.11
BRD9-213ENST00000495794 ASPMQ8IZT6 3477 aa8.12□□□□□ -1.11
BRD9-213ENST00000495794 LUZP6Q538Z0 58 aa8.09□□□□□ -1.11
BRD9-213ENST00000495794 ZFHX4Q86UP3 3567 aa8.09□□□□□ -1.11
BRD9-213ENST00000495794 DCHS1Q96JQ0 3298 aa8.08□□□□□ -1.12
BRD9-213ENST00000495794 MXRA5Q9NR99 2828 aa8.07□□□□□ -1.12
BRD9-213ENST00000495794 TENM3Q9P273 2699 aa8.06□□□□□ -1.12
BRD9-213ENST00000495794 ASB16-AS1Q495Z4 193 aa8.04□□□□□ -1.12
BRD9-213ENST00000495794 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
BRD9-213ENST00000495794 M0R2T5 61 aa8.03□□□□□ -1.12
BRD9-213ENST00000495794 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
BRD9-213ENST00000495794 R4GN34 69 aa8.02□□□□□ -1.13
BRD9-213ENST00000495794 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
BRD9-213ENST00000495794 H3BS24 57 aa7.97□□□□□ -1.13
BRD9-213ENST00000495794 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
BRD9-213ENST00000495794 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
BRD9-213ENST00000495794 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
BRD9-213ENST00000495794 TENM1Q9UKZ4 2725 aa7.93□□□□□ -1.14
BRD9-213ENST00000495794 ROMO1P60602 79 aa7.92□□□□□ -1.14
BRD9-213ENST00000495794 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
BRD9-213ENST00000495794 SMG1Q96Q15 3661 aaKnown RBP7.89□□□□□ -1.15
BRD9-213ENST00000495794 A6NN06 94 aa7.88□□□□□ -1.15
BRD9-213ENST00000495794 M0QZ58 72 aa7.86□□□□□ -1.15
BRD9-213ENST00000495794 CELSR1Q9NYQ6 3014 aa7.86□□□□□ -1.15
BRD9-213ENST00000495794 CSMD1Q96PZ7 3565 aa7.82□□□□□ -1.16
BRD9-213ENST00000495794 ADM2Q7Z4H4 148 aa7.81□□□□□ -1.16
BRD9-213ENST00000495794 PKD1L1Q8TDX9 2849 aa7.79□□□□□ -1.16
BRD9-213ENST00000495794 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
BRD9-213ENST00000495794 A8MU10 97 aa7.74□□□□□ -1.17
BRD9-213ENST00000495794 PDZD2O15018 2839 aa7.73□□□□□ -1.17
BRD9-213ENST00000495794 TENM2Q9NT68 2774 aa7.69□□□□□ -1.18
BRD9-213ENST00000495794 KRTAP21-3Q3LHN1 58 aa7.69□□□□□ -1.18
BRD9-213ENST00000495794 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
BRD9-213ENST00000495794 SVEP1Q4LDE5 3571 aa7.66□□□□□ -1.18
BRD9-213ENST00000495794 A8MUU9 505 aa7.65□□□□□ -1.19
BRD9-213ENST00000495794 TGP01266 2768 aa7.65□□□□□ -1.19
BRD9-213ENST00000495794 VWFP04275 2813 aa7.62□□□□□ -1.19
BRD9-213ENST00000495794 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
BRD9-213ENST00000495794 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
BRD9-213ENST00000495794 SPENQ96T58 3664 aaKnown RBP7.61□□□□□ -1.19
BRD9-213ENST00000495794 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
BRD9-213ENST00000495794 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
BRD9-213ENST00000495794 NBPF19A0A087WUL8 3843 aa7.56□□□□□ -1.2
BRD9-213ENST00000495794 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
BRD9-213ENST00000495794 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
BRD9-213ENST00000495794 KRTAP16-1A8MUX0 517 aa7.46□□□□□ -1.22
BRD9-213ENST00000495794 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
BRD9-213ENST00000495794 XP32Q5T750 250 aa7.42□□□□□ -1.22
BRD9-213ENST00000495794 CSMD2Q7Z408 3487 aa7.41□□□□□ -1.22
BRD9-213ENST00000495794 CUBNO60494 3623 aa7.4□□□□□ -1.23
BRD9-213ENST00000495794 NDUFAF8A1L188 74 aa7.38□□□□□ -1.23
BRD9-213ENST00000495794 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
BRD9-213ENST00000495794 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
BRD9-213ENST00000495794 H0YAA0 97 aa7.28□□□□□ -1.24
BRD9-213ENST00000495794 TNP1P09430 55 aa7.27□□□□□ -1.25
BRD9-213ENST00000495794 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
BRD9-213ENST00000495794 FBN3Q75N90 2809 aa7.24□□□□□ -1.25
BRD9-213ENST00000495794 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
BRD9-213ENST00000495794 TRRAPQ9Y4A5 3859 aa7.21□□□□□ -1.25
BRD9-213ENST00000495794 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
BRD9-213ENST00000495794 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
BRD9-213ENST00000495794 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
BRD9-213ENST00000495794 P0C880 135 aa7.14□□□□□ -1.27
BRD9-213ENST00000495794 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
BRD9-213ENST00000495794 COL7A1Q02388 2944 aa7.1□□□□□ -1.27
BRD9-213ENST00000495794 VPS13CQ709C8 3753 aa7.09□□□□□ -1.27
BRD9-213ENST00000495794 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
BRD9-213ENST00000495794 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
BRD9-213ENST00000495794 ZNF469Q96JG9 3925 aaPredicted RBP6.96□□□□□ -1.3
BRD9-213ENST00000495794 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
BRD9-213ENST00000495794 HUWE1Q7Z6Z7 4374 aaKnown RBP6.84□□□□□ -1.31
BRD9-213ENST00000495794 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
BRD9-213ENST00000495794 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
BRD9-213ENST00000495794 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
BRD9-213ENST00000495794 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
BRD9-213ENST00000495794 KRTAP10-6P60371 365 aaPredicted RBP6.66□□□□□ -1.34
BRD9-213ENST00000495794 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
BRD9-213ENST00000495794 MT1HL1P0DM35 61 aa6.59□□□□□ -1.36
BRD9-213ENST00000495794 DNAH9Q9NYC9 4486 aa6.58□□□□□ -1.36
BRD9-213ENST00000495794 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
BRD9-213ENST00000495794 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
BRD9-213ENST00000495794 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
BRD9-213ENST00000495794 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
BRD9-213ENST00000495794 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
BRD9-213ENST00000495794 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.39
BRD9-213ENST00000495794 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
BRD9-213ENST00000495794 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms