RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
TM9SF4-207ENST00000495749 KRTAP13-1Q8IUC0 172 aa5.48□□□□□ -1.53
TM9SF4-207ENST00000495749 DNAH17Q9UFH2 4485 aa5.47□□□□□ -1.53
TM9SF4-207ENST00000495749 PCOTHQ58A44 107 aa5.47□□□□□ -1.53
TM9SF4-207ENST00000495749 RYR3Q15413 4870 aa5.46□□□□□ -1.54
TM9SF4-207ENST00000495749 Q5VV11 94 aa5.46□□□□□ -1.54
TM9SF4-207ENST00000495749 Q8N9P0 234 aaPredicted RBP5.46□□□□□ -1.54
TM9SF4-207ENST00000495749 CIRBP-AS1Q8TBR5 109 aa5.46□□□□□ -1.54
TM9SF4-207ENST00000495749 Q96NJ1 140 aa5.46□□□□□ -1.54
TM9SF4-207ENST00000495749 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.54
TM9SF4-207ENST00000495749 NDUFS5O43920 106 aa5.45□□□□□ -1.54
TM9SF4-207ENST00000495749 SPINK6Q6UWN8 80 aa5.45□□□□□ -1.54
TM9SF4-207ENST00000495749 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
TM9SF4-207ENST00000495749 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
TM9SF4-207ENST00000495749 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
TM9SF4-207ENST00000495749 COA5Q86WW8 74 aa5.44□□□□□ -1.54
TM9SF4-207ENST00000495749 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
TM9SF4-207ENST00000495749 KMT2CQ8NEZ4 4911 aaKnown RBP5.43□□□□□ -1.54
TM9SF4-207ENST00000495749 C8orf17Q9NRJ1 99 aa5.43□□□□□ -1.54
TM9SF4-207ENST00000495749 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
TM9SF4-207ENST00000495749 IGLV7-46A0A075B6I9 117 aa5.42□□□□□ -1.54
TM9SF4-207ENST00000495749 LIMD2Q9BT23 127 aa5.42□□□□□ -1.54
TM9SF4-207ENST00000495749 ZNF861PO60384 105 aa5.42□□□□□ -1.54
TM9SF4-207ENST00000495749 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
TM9SF4-207ENST00000495749 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
TM9SF4-207ENST00000495749 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
TM9SF4-207ENST00000495749 TP53AIP1Q9HCN2 124 aa5.41□□□□□ -1.54
TM9SF4-207ENST00000495749 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
TM9SF4-207ENST00000495749 CDK2AP2O75956 126 aa5.4□□□□□ -1.54
TM9SF4-207ENST00000495749 A0A1B0GVX0 72 aa5.4□□□□□ -1.55
TM9SF4-207ENST00000495749 A0A087X002 238 aa5.4□□□□□ -1.55
TM9SF4-207ENST00000495749 LINC00483Q53H64 154 aa5.4□□□□□ -1.55
TM9SF4-207ENST00000495749 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.55
TM9SF4-207ENST00000495749 DNAH5Q8TE73 4624 aa5.39□□□□□ -1.55
TM9SF4-207ENST00000495749 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
TM9SF4-207ENST00000495749 IGLV7-43P04211 117 aa5.39□□□□□ -1.55
TM9SF4-207ENST00000495749 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
TM9SF4-207ENST00000495749 SMR3BP02814 79 aaPredicted RBP5.38□□□□□ -1.55
TM9SF4-207ENST00000495749 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
TM9SF4-207ENST00000495749 ZNF706Q9Y5V0 76 aaPredicted RBP5.37□□□□□ -1.55
TM9SF4-207ENST00000495749 MRPL34Q9BQ48 92 aaKnown RBP5.37□□□□□ -1.55
TM9SF4-207ENST00000495749 PKHD1P08F94 4074 aa5.37□□□□□ -1.55
TM9SF4-207ENST00000495749 A6NED7 52 aa5.37□□□□□ -1.55
TM9SF4-207ENST00000495749 RYR2Q92736 4967 aa5.34□□□□□ -1.55
TM9SF4-207ENST00000495749 LCA10Q71F78 164 aa5.34□□□□□ -1.55
TM9SF4-207ENST00000495749 Q75L30 129 aa5.34□□□□□ -1.55
TM9SF4-207ENST00000495749 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
TM9SF4-207ENST00000495749 HRES1P13985 223 aa5.34□□□□□ -1.56
TM9SF4-207ENST00000495749 Q5W150 140 aa5.32□□□□□ -1.56
TM9SF4-207ENST00000495749 LINC00313P59037 77 aa5.31□□□□□ -1.56
TM9SF4-207ENST00000495749 RETNLBQ9BQ08 111 aa5.31□□□□□ -1.56
TM9SF4-207ENST00000495749 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
TM9SF4-207ENST00000495749 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
TM9SF4-207ENST00000495749 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
TM9SF4-207ENST00000495749 VPS13BQ7Z7G8 4022 aa5.3□□□□□ -1.56
TM9SF4-207ENST00000495749 FAT1Q14517 4588 aa5.29□□□□□ -1.56
TM9SF4-207ENST00000495749 PKD1P98161 4303 aa5.28□□□□□ -1.56
TM9SF4-207ENST00000495749 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
TM9SF4-207ENST00000495749 KRTAP13-2Q52LG2 175 aa5.28□□□□□ -1.56
TM9SF4-207ENST00000495749 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
TM9SF4-207ENST00000495749 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
TM9SF4-207ENST00000495749 PLA2G1BP04054 148 aaKnown RBP5.27□□□□□ -1.57
TM9SF4-207ENST00000495749 SPINK7P58062 85 aa5.27□□□□□ -1.57
TM9SF4-207ENST00000495749 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
TM9SF4-207ENST00000495749 KRTAP13-3Q3SY46 172 aa5.26□□□□□ -1.57
TM9SF4-207ENST00000495749 Q6ZSA8 131 aa5.25□□□□□ -1.57
TM9SF4-207ENST00000495749 FLG2Q5D862 2391 aaPredicted RBP5.25□□□□□ -1.57
TM9SF4-207ENST00000495749 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
TM9SF4-207ENST00000495749 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
TM9SF4-207ENST00000495749 A6NN06 94 aa5.22□□□□□ -1.57
TM9SF4-207ENST00000495749 ACYP2P14621 99 aa5.22□□□□□ -1.57
TM9SF4-207ENST00000495749 SSBP3-AS1Q7Z2R9 100 aa5.21□□□□□ -1.57
TM9SF4-207ENST00000495749 DMBT1Q9UGM3 2413 aaPredicted RBP5.2□□□□□ -1.58
TM9SF4-207ENST00000495749 KRTAP1-4P0C5Y4 121 aa5.2□□□□□ -1.58
TM9SF4-207ENST00000495749 TYMSOSQ8TAI1 123 aa5.2□□□□□ -1.58
TM9SF4-207ENST00000495749 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
TM9SF4-207ENST00000495749 FAM229AH3BQW9 127 aa5.18□□□□□ -1.58
TM9SF4-207ENST00000495749 DMAC1Q96GE9 116 aa5.18□□□□□ -1.58
TM9SF4-207ENST00000495749 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.58
TM9SF4-207ENST00000495749 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
TM9SF4-207ENST00000495749 IGKV2D-30A0A075B6S6 120 aa5.13□□□□□ -1.59
TM9SF4-207ENST00000495749 A0A1B0GU69 56 aa5.13□□□□□ -1.59
TM9SF4-207ENST00000495749 HERC2O95714 4834 aa5.13□□□□□ -1.59
TM9SF4-207ENST00000495749 C9orf92A6NGG3 77 aa5.12□□□□□ -1.59
TM9SF4-207ENST00000495749 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
TM9SF4-207ENST00000495749 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
TM9SF4-207ENST00000495749 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
TM9SF4-207ENST00000495749 LRP1Q07954 4544 aaKnown RBP5.1□□□□□ -1.59
TM9SF4-207ENST00000495749 A0A1B0GVY2 172 aa5.1□□□□□ -1.59
TM9SF4-207ENST00000495749 LINC00304Q8N9R0 145 aa5.1□□□□□ -1.59
TM9SF4-207ENST00000495749 KIAA1109Q2LD37 5005 aa5.06□□□□□ -1.6
TM9SF4-207ENST00000495749 SPINK1P00995 79 aa5.05□□□□□ -1.6
TM9SF4-207ENST00000495749 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
TM9SF4-207ENST00000495749 KRTAP3-2Q9BYR7 98 aa5.05□□□□□ -1.6
TM9SF4-207ENST00000495749 SPATA8Q6RVD6 105 aa5.04□□□□□ -1.6
TM9SF4-207ENST00000495749 UQCR11O14957 56 aa5.04□□□□□ -1.6
TM9SF4-207ENST00000495749 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
TM9SF4-207ENST00000495749 MYCBP2O75592 4640 aa5.03□□□□□ -1.6
TM9SF4-207ENST00000495749 Q8N1X5 172 aa5.02□□□□□ -1.61
TM9SF4-207ENST00000495749 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms