RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
HDAC6-235ENST00000495515 DSCR10P59022 87 aa9.26□□□□□ -0.93
HDAC6-235ENST00000495515 C8orf87E5RJ46 101 aa9.25□□□□□ -0.93
HDAC6-235ENST00000495515 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
HDAC6-235ENST00000495515 A8MWP4 228 aa9.24□□□□□ -0.93
HDAC6-235ENST00000495515 UBL5Q9BZL1 73 aa9.23□□□□□ -0.93
HDAC6-235ENST00000495515 Q6ZVQ6 151 aa9.22□□□□□ -0.93
HDAC6-235ENST00000495515 Q75L30 129 aa9.22□□□□□ -0.93
HDAC6-235ENST00000495515 BPY2O14599 106 aa9.21□□□□□ -0.94
HDAC6-235ENST00000495515 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
HDAC6-235ENST00000495515 PCOTHQ58A44 107 aa9.19□□□□□ -0.94
HDAC6-235ENST00000495515 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
HDAC6-235ENST00000495515 IGKV3D-7A0A0C4DH55 119 aa9.17□□□□□ -0.94
HDAC6-235ENST00000495515 ATP11AUNQ6ZP68 121 aa9.17□□□□□ -0.94
HDAC6-235ENST00000495515 NOTCH2NLQ7Z3S9 236 aa9.17□□□□□ -0.94
HDAC6-235ENST00000495515 PRR15Q8IV56 129 aa9.17□□□□□ -0.94
HDAC6-235ENST00000495515 A8MUU9 505 aa9.16□□□□□ -0.94
HDAC6-235ENST00000495515 ACYP1P07311 99 aa9.15□□□□□ -0.94
HDAC6-235ENST00000495515 MUC17Q685J3 4493 aa9.15□□□□□ -0.94
HDAC6-235ENST00000495515 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
HDAC6-235ENST00000495515 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
HDAC6-235ENST00000495515 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
HDAC6-235ENST00000495515 FAM240AA0A1B0GVK7 77 aa9.11□□□□□ -0.95
HDAC6-235ENST00000495515 K7EQZ3 153 aa9.11□□□□□ -0.95
HDAC6-235ENST00000495515 MUC2Q02817 5179 aa9.07□□□□□ -0.96
HDAC6-235ENST00000495515 MMP24-AS1A0A0U1RRL7 71 aa9.05□□□□□ -0.96
HDAC6-235ENST00000495515 CXCL6P80162 114 aa9.04□□□□□ -0.96
HDAC6-235ENST00000495515 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
HDAC6-235ENST00000495515 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
HDAC6-235ENST00000495515 hDV103S1A0JD37 113 aa9.03□□□□□ -0.96
HDAC6-235ENST00000495515 J3QR89 54 aa9.03□□□□□ -0.96
HDAC6-235ENST00000495515 Q8N9L7 120 aa9.03□□□□□ -0.96
HDAC6-235ENST00000495515 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-235ENST00000495515 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
HDAC6-235ENST00000495515 ATP5EP2Q5VTU8 51 aa8.98□□□□□ -0.97
HDAC6-235ENST00000495515 CASC2Q6XLA1 102 aa8.98□□□□□ -0.97
HDAC6-235ENST00000495515 WFDC13Q8IUB5 93 aa8.97□□□□□ -0.97
HDAC6-235ENST00000495515 ZCCHC13Q8WW36 166 aaKnown RBP8.96□□□□□ -0.98
HDAC6-235ENST00000495515 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
HDAC6-235ENST00000495515 NDUFS5O43920 106 aa8.95□□□□□ -0.98
HDAC6-235ENST00000495515 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
HDAC6-235ENST00000495515 FAT4Q6V0I7 4981 aa8.92□□□□□ -0.98
HDAC6-235ENST00000495515 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-235ENST00000495515 HIST1H4AP62805 103 aaKnown RBP8.86□□□□□ -0.99
HDAC6-235ENST00000495515 K7ERU9 68 aa8.84□□□□□ -0.99
HDAC6-235ENST00000495515 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
HDAC6-235ENST00000495515 SPINK7P58062 85 aa8.8□□□□□ -1
HDAC6-235ENST00000495515 KRTAP9-2Q9BYQ4 174 aa8.8□□□□□ -1
HDAC6-235ENST00000495515 TP53AIP1Q9HCN2 124 aa8.8□□□□□ -1
HDAC6-235ENST00000495515 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
HDAC6-235ENST00000495515 RBM12B-AS1Q9P1G2 102 aa8.76□□□□□ -1.01
HDAC6-235ENST00000495515 Q5W150 140 aa8.75□□□□□ -1.01
HDAC6-235ENST00000495515 LCE2CQ5TA81 110 aa8.74□□□□□ -1.01
HDAC6-235ENST00000495515 HRES1P13985 223 aa8.73□□□□□ -1.01
HDAC6-235ENST00000495515 A0A087WVE0 104 aa8.71□□□□□ -1.02
HDAC6-235ENST00000495515 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.02
HDAC6-235ENST00000495515 FAM236CP0DP71 79 aa8.71□□□□□ -1.02
HDAC6-235ENST00000495515 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
HDAC6-235ENST00000495515 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
HDAC6-235ENST00000495515 C7orf65Q6ZTY9 151 aa8.7□□□□□ -1.02
HDAC6-235ENST00000495515 MPLKIPQ8TAP9 179 aa8.68□□□□□ -1.02
HDAC6-235ENST00000495515 UQCRQO14949 82 aa8.64□□□□□ -1.03
HDAC6-235ENST00000495515 MT1HP80294 61 aa8.64□□□□□ -1.03
HDAC6-235ENST00000495515 IMUPQ9GZP8 106 aa8.64□□□□□ -1.03
HDAC6-235ENST00000495515 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
HDAC6-235ENST00000495515 M0R2T5 61 aa8.6□□□□□ -1.03
HDAC6-235ENST00000495515 MT-ATP8P03928 68 aa8.58□□□□□ -1.04
HDAC6-235ENST00000495515 ATOX1O00244 68 aa8.57□□□□□ -1.04
HDAC6-235ENST00000495515 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
HDAC6-235ENST00000495515 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
HDAC6-235ENST00000495515 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
HDAC6-235ENST00000495515 H0Y9P7 68 aa8.54□□□□□ -1.04
HDAC6-235ENST00000495515 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
HDAC6-235ENST00000495515 MP68P56378 58 aa8.5□□□□□ -1.05
HDAC6-235ENST00000495515 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
HDAC6-235ENST00000495515 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
HDAC6-235ENST00000495515 FLGP20930 4061 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-235ENST00000495515 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
HDAC6-235ENST00000495515 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-235ENST00000495515 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.06
HDAC6-235ENST00000495515 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
HDAC6-235ENST00000495515 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
HDAC6-235ENST00000495515 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
HDAC6-235ENST00000495515 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
HDAC6-235ENST00000495515 LINC00208Q96KT6 92 aa8.44□□□□□ -1.06
HDAC6-235ENST00000495515 H3BPC8 53 aa8.42□□□□□ -1.06
HDAC6-235ENST00000495515 KRTAP10-6P60371 365 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-235ENST00000495515 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-235ENST00000495515 TRAV7A0A075B6U4 112 aa8.37□□□□□ -1.07
HDAC6-235ENST00000495515 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
HDAC6-235ENST00000495515 FSIP2Q5CZC0 6907 aa8.3□□□□□ -1.08
HDAC6-235ENST00000495515 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
HDAC6-235ENST00000495515 KLKP1Q107X0 134 aa8.28□□□□□ -1.08
HDAC6-235ENST00000495515 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
HDAC6-235ENST00000495515 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
HDAC6-235ENST00000495515 S4R3F8 94 aa8.26□□□□□ -1.09
HDAC6-235ENST00000495515 A8MUN3 132 aa8.25□□□□□ -1.09
HDAC6-235ENST00000495515 SERP2Q8N6R1 65 aa8.23□□□□□ -1.09
HDAC6-235ENST00000495515 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
HDAC6-235ENST00000495515 CSAG1Q6PB30 78 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms