RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 A0A1B0GVX0 72 aa10.83□□□□□ -0.68
HDDC3-203ENST00000494993 UBE2V1Q13404 147 aa10.83□□□□□ -0.68
HDDC3-203ENST00000494993 K7ERJ3 54 aa10.82□□□□□ -0.68
HDDC3-203ENST00000494993 COX6CP09669 75 aa10.82□□□□□ -0.68
HDDC3-203ENST00000494993 MTURNQ8N3F0 131 aa10.82□□□□□ -0.68
HDDC3-203ENST00000494993 HSD52Q0P140 79 aa10.8□□□□□ -0.68
HDDC3-203ENST00000494993 VPS25Q9BRG1 176 aa10.79□□□□□ -0.68
HDDC3-203ENST00000494993 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
HDDC3-203ENST00000494993 MACF1Q9UPN3 7388 aaKnown RBP10.75□□□□□ -0.69
HDDC3-203ENST00000494993 SPINK7P58062 85 aa10.74□□□□□ -0.69
HDDC3-203ENST00000494993 RBM3P98179 157 aaKnown RBP10.74□□□□□ -0.69
HDDC3-203ENST00000494993 J3KT08 172 aa10.71□□□□□ -0.69
HDDC3-203ENST00000494993 DSCR8Q96T75 97 aa10.71□□□□□ -0.69
HDDC3-203ENST00000494993 C21orf62-AS1Q17RA5 79 aa10.67□□□□□ -0.7
HDDC3-203ENST00000494993 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
HDDC3-203ENST00000494993 SYNE2Q8WXH0 6885 aaKnown RBP10.66□□□□□ -0.7
HDDC3-203ENST00000494993 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
HDDC3-203ENST00000494993 LINC00846Q9NV44 126 aa10.65□□□□□ -0.7
HDDC3-203ENST00000494993 C9JAW5 83 aa10.64□□□□□ -0.71
HDDC3-203ENST00000494993 SCGB1C2P0DMR2 95 aa10.64□□□□□ -0.71
HDDC3-203ENST00000494993 Q6ZQT0 140 aa10.64□□□□□ -0.71
HDDC3-203ENST00000494993 A8MWP4 228 aa10.63□□□□□ -0.71
HDDC3-203ENST00000494993 NDUFB1O75438 58 aa10.63□□□□□ -0.71
HDDC3-203ENST00000494993 KRTAP19-6Q3LI70 58 aa10.63□□□□□ -0.71
HDDC3-203ENST00000494993 WFDC13Q8IUB5 93 aa10.62□□□□□ -0.71
HDDC3-203ENST00000494993 BAALC-AS2P0C853 105 aa10.6□□□□□ -0.71
HDDC3-203ENST00000494993 C8orf17Q9NRJ1 99 aa10.59□□□□□ -0.71
HDDC3-203ENST00000494993 UQCR10Q9UDW1 63 aa10.58□□□□□ -0.72
HDDC3-203ENST00000494993 LYRM7Q5U5X0 104 aa10.57□□□□□ -0.72
HDDC3-203ENST00000494993 IGKV3D-7A0A0C4DH55 119 aa10.52□□□□□ -0.73
HDDC3-203ENST00000494993 Q6ZVQ6 151 aa10.5□□□□□ -0.73
HDDC3-203ENST00000494993 A0A1B0GW54 56 aa10.49□□□□□ -0.73
HDDC3-203ENST00000494993 JMJD7-PLA2G4BH0Y9G9 81 aa10.48□□□□□ -0.73
HDDC3-203ENST00000494993 LOC110117498A0A087WWA1 95 aa10.47□□□□□ -0.73
HDDC3-203ENST00000494993 PRR15Q8IV56 129 aa10.43□□□□□ -0.74
HDDC3-203ENST00000494993 PDE6GP18545 87 aa10.42□□□□□ -0.74
HDDC3-203ENST00000494993 ATXN8Q156A1 80 aa10.42□□□□□ -0.74
HDDC3-203ENST00000494993 H1FX-AS1Q4G0G2 97 aa10.4□□□□□ -0.74
HDDC3-203ENST00000494993 MMP24-AS1A0A0U1RRL7 71 aa10.39□□□□□ -0.75
HDDC3-203ENST00000494993 TMEM254Q8TBM7 123 aa10.39□□□□□ -0.75
HDDC3-203ENST00000494993 MRPL34Q9BQ48 92 aaKnown RBP10.39□□□□□ -0.75
HDDC3-203ENST00000494993 C14orf132Q9NPU4 83 aa10.38□□□□□ -0.75
HDDC3-203ENST00000494993 NAA38Q9BRA0 125 aaKnown RBP10.37□□□□□ -0.75
HDDC3-203ENST00000494993 NREPQ16612 68 aa10.36□□□□□ -0.75
HDDC3-203ENST00000494993 KRTAP6-3Q3LI67 103 aa10.33□□□□□ -0.76
HDDC3-203ENST00000494993 hDV103S1A0JD37 113 aa10.3□□□□□ -0.76
HDDC3-203ENST00000494993 NDUFS5O43920 106 aa10.3□□□□□ -0.76
HDDC3-203ENST00000494993 M0R143 59 aa10.29□□□□□ -0.76
HDDC3-203ENST00000494993 K7EQZ3 153 aa10.28□□□□□ -0.76
HDDC3-203ENST00000494993 TMA7Q9Y2S6 64 aaKnown RBP10.27□□□□□ -0.77
HDDC3-203ENST00000494993 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
HDDC3-203ENST00000494993 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
HDDC3-203ENST00000494993 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
HDDC3-203ENST00000494993 Q5W150 140 aa10.2□□□□□ -0.78
HDDC3-203ENST00000494993 BPY2O14599 106 aa10.14□□□□□ -0.79
HDDC3-203ENST00000494993 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
HDDC3-203ENST00000494993 H3BT86 120 aa10.09□□□□□ -0.79
HDDC3-203ENST00000494993 HCG22E2RYF7 251 aa10.08□□□□□ -0.8
HDDC3-203ENST00000494993 CASC2Q6XLA1 102 aa10.08□□□□□ -0.8
HDDC3-203ENST00000494993 Q8N9L7 120 aa10.06□□□□□ -0.8
HDDC3-203ENST00000494993 C5orf47Q569G3 176 aa10.05□□□□□ -0.8
HDDC3-203ENST00000494993 NEBP20929 6669 aa10.05□□□□□ -0.8
HDDC3-203ENST00000494993 FAM236AA0A1B0GUQ0 79 aa10.03□□□□□ -0.8
HDDC3-203ENST00000494993 FAM236BA0A1B0GV22 79 aa10.03□□□□□ -0.8
HDDC3-203ENST00000494993 A6NN06 94 aa10.02□□□□□ -0.81
HDDC3-203ENST00000494993 CXCL6P80162 114 aa10.01□□□□□ -0.81
HDDC3-203ENST00000494993 BATFQ16520 125 aa10.01□□□□□ -0.81
HDDC3-203ENST00000494993 MT1BP07438 61 aa10□□□□□ -0.81
HDDC3-203ENST00000494993 TSTD3H0UI37 97 aa9.98□□□□□ -0.81
HDDC3-203ENST00000494993 Q5VV11 94 aa9.97□□□□□ -0.81
HDDC3-203ENST00000494993 MUC12Q9UKN1 5478 aa9.97□□□□□ -0.81
HDDC3-203ENST00000494993 C9orf118A6NHY6 69 aa9.96□□□□□ -0.82
HDDC3-203ENST00000494993 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
HDDC3-203ENST00000494993 SMIM6P0DI80 62 aa9.95□□□□□ -0.82
HDDC3-203ENST00000494993 S4R3F8 94 aa9.95□□□□□ -0.82
HDDC3-203ENST00000494993 A0A1W2PPM0 123 aa9.93□□□□□ -0.82
HDDC3-203ENST00000494993 KRTAP19-8Q3LI54 63 aa9.93□□□□□ -0.82
HDDC3-203ENST00000494993 SPRR2GQ9BYE4 73 aa9.93□□□□□ -0.82
HDDC3-203ENST00000494993 CSAG1Q6PB30 78 aa9.91□□□□□ -0.82
HDDC3-203ENST00000494993 TAX1BP3O14907 124 aa9.9□□□□□ -0.82
HDDC3-203ENST00000494993 LCA10Q71F78 164 aa9.88□□□□□ -0.83
HDDC3-203ENST00000494993 C1orf64Q8NEQ6 169 aa9.88□□□□□ -0.83
HDDC3-203ENST00000494993 KRTAP10-5P60370 271 aa9.84□□□□□ -0.83
HDDC3-203ENST00000494993 KLKP1Q107X0 134 aa9.8□□□□□ -0.84
HDDC3-203ENST00000494993 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
HDDC3-203ENST00000494993 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
HDDC3-203ENST00000494993 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
HDDC3-203ENST00000494993 KRTAP5-9P26371 169 aa9.72□□□□□ -0.85
HDDC3-203ENST00000494993 KRTAP20-1Q3LI63 56 aa9.72□□□□□ -0.85
HDDC3-203ENST00000494993 TP53AIP1Q9HCN2 124 aa9.72□□□□□ -0.85
HDDC3-203ENST00000494993 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
HDDC3-203ENST00000494993 KMT2DO14686 5537 aa9.66□□□□□ -0.86
HDDC3-203ENST00000494993 PRO0461Q9UI25 63 aa9.65□□□□□ -0.86
HDDC3-203ENST00000494993 MDN1Q9NU22 5596 aa9.64□□□□□ -0.87
HDDC3-203ENST00000494993 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
HDDC3-203ENST00000494993 IMUPQ9GZP8 106 aa9.62□□□□□ -0.87
HDDC3-203ENST00000494993 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
HDDC3-203ENST00000494993 A0A087WVE0 104 aa9.58□□□□□ -0.88
HDDC3-203ENST00000494993 K7EP34 96 aa9.53□□□□□ -0.88
HDDC3-203ENST00000494993 LOC105371267A0A1B0GV96 52 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms