RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
SHISA5-216ENST00000494854 NDUFB1O75438 58 aa9.17□□□□□ -0.94
SHISA5-216ENST00000494854 NDUFC1O43677 76 aa9.17□□□□□ -0.94
SHISA5-216ENST00000494854 CASC2Q6XLA1 102 aa9.17□□□□□ -0.94
SHISA5-216ENST00000494854 SSBP3-AS1Q7Z2R9 100 aa9.17□□□□□ -0.94
SHISA5-216ENST00000494854 J3QL48 77 aa9.16□□□□□ -0.94
SHISA5-216ENST00000494854 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
SHISA5-216ENST00000494854 OXTP01178 125 aa9.15□□□□□ -0.94
SHISA5-216ENST00000494854 CD164Q04900 197 aa9.14□□□□□ -0.95
SHISA5-216ENST00000494854 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
SHISA5-216ENST00000494854 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
SHISA5-216ENST00000494854 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
SHISA5-216ENST00000494854 LRP1Q07954 4544 aaKnown RBP9.13□□□□□ -0.95
SHISA5-216ENST00000494854 A0A087X002 238 aa9.12□□□□□ -0.95
SHISA5-216ENST00000494854 FAM229BQ4G0N7 80 aa9.11□□□□□ -0.95
SHISA5-216ENST00000494854 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
SHISA5-216ENST00000494854 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
SHISA5-216ENST00000494854 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
SHISA5-216ENST00000494854 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
SHISA5-216ENST00000494854 hDV103S1A0JD37 113 aa9.09□□□□□ -0.95
SHISA5-216ENST00000494854 RPS28P62857 69 aaKnown RBP9.09□□□□□ -0.95
SHISA5-216ENST00000494854 KRTAP1-4P0C5Y4 121 aa9.08□□□□□ -0.96
SHISA5-216ENST00000494854 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
SHISA5-216ENST00000494854 C8orf17Q9NRJ1 99 aa9.07□□□□□ -0.96
SHISA5-216ENST00000494854 ASB16-AS1Q495Z4 193 aa9.05□□□□□ -0.96
SHISA5-216ENST00000494854 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
SHISA5-216ENST00000494854 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
SHISA5-216ENST00000494854 MP68P56378 58 aa9.03□□□□□ -0.96
SHISA5-216ENST00000494854 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
SHISA5-216ENST00000494854 H0Y9P7 68 aa9□□□□□ -0.97
SHISA5-216ENST00000494854 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
SHISA5-216ENST00000494854 Q5XG85 94 aa8.99□□□□□ -0.97
SHISA5-216ENST00000494854 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
SHISA5-216ENST00000494854 LINC00208Q96KT6 92 aa8.98□□□□□ -0.97
SHISA5-216ENST00000494854 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
SHISA5-216ENST00000494854 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
SHISA5-216ENST00000494854 H3BPC8 53 aa8.97□□□□□ -0.97
SHISA5-216ENST00000494854 TP53AIP1Q9HCN2 124 aa8.97□□□□□ -0.97
SHISA5-216ENST00000494854 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
SHISA5-216ENST00000494854 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
SHISA5-216ENST00000494854 LIMD2Q9BT23 127 aa8.94□□□□□ -0.98
SHISA5-216ENST00000494854 NDUFS5O43920 106 aa8.93□□□□□ -0.98
SHISA5-216ENST00000494854 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
SHISA5-216ENST00000494854 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
SHISA5-216ENST00000494854 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
SHISA5-216ENST00000494854 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
SHISA5-216ENST00000494854 TNXBP22105 4242 aa8.9□□□□□ -0.98
SHISA5-216ENST00000494854 SPINK1P00995 79 aa8.88□□□□□ -0.99
SHISA5-216ENST00000494854 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
SHISA5-216ENST00000494854 PRR26Q8N8Z3 221 aa8.88□□□□□ -0.99
SHISA5-216ENST00000494854 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
SHISA5-216ENST00000494854 LINC00313P59037 77 aa8.86□□□□□ -0.99
SHISA5-216ENST00000494854 LINC00304Q8N9R0 145 aa8.84□□□□□ -1
SHISA5-216ENST00000494854 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
SHISA5-216ENST00000494854 PRR4Q16378 134 aa8.82□□□□□ -1
SHISA5-216ENST00000494854 RPS29P62273 56 aaKnown RBP8.81□□□□□ -1
SHISA5-216ENST00000494854 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
SHISA5-216ENST00000494854 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
SHISA5-216ENST00000494854 SMIM26A0A096LP01 95 aa8.79□□□□□ -1
SHISA5-216ENST00000494854 Q5W150 140 aa8.78□□□□□ -1
SHISA5-216ENST00000494854 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
SHISA5-216ENST00000494854 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
SHISA5-216ENST00000494854 KRTAP16-1A8MUX0 517 aa8.76□□□□□ -1.01
SHISA5-216ENST00000494854 PCOTHQ58A44 107 aa8.76□□□□□ -1.01
SHISA5-216ENST00000494854 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
SHISA5-216ENST00000494854 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
SHISA5-216ENST00000494854 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
SHISA5-216ENST00000494854 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
SHISA5-216ENST00000494854 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
SHISA5-216ENST00000494854 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.02
SHISA5-216ENST00000494854 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
SHISA5-216ENST00000494854 LRP2P98164 4655 aa8.62□□□□□ -1.03
SHISA5-216ENST00000494854 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
SHISA5-216ENST00000494854 COA5Q86WW8 74 aa8.58□□□□□ -1.04
SHISA5-216ENST00000494854 Q1T7F1 81 aa8.55□□□□□ -1.04
SHISA5-216ENST00000494854 HRES1P13985 223 aa8.54□□□□□ -1.04
SHISA5-216ENST00000494854 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
SHISA5-216ENST00000494854 SVIPQ8NHG7 77 aa8.52□□□□□ -1.05
SHISA5-216ENST00000494854 IGKV2D-30A0A075B6S6 120 aa8.51□□□□□ -1.05
SHISA5-216ENST00000494854 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
SHISA5-216ENST00000494854 A8MUU9 505 aa8.48□□□□□ -1.05
SHISA5-216ENST00000494854 V9GYY9 64 aa8.48□□□□□ -1.05
SHISA5-216ENST00000494854 DMAC1Q96GE9 116 aa8.46□□□□□ -1.05
SHISA5-216ENST00000494854 ACYP2P14621 99 aa8.46□□□□□ -1.06
SHISA5-216ENST00000494854 LPAP08519 4548 aa8.46□□□□□ -1.06
SHISA5-216ENST00000494854 C7orf65Q6ZTY9 151 aa8.44□□□□□ -1.06
SHISA5-216ENST00000494854 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
SHISA5-216ENST00000494854 PSPHP1O15172 72 aa8.41□□□□□ -1.06
SHISA5-216ENST00000494854 A8MUN3 132 aa8.37□□□□□ -1.07
SHISA5-216ENST00000494854 Q75L30 129 aa8.37□□□□□ -1.07
SHISA5-216ENST00000494854 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
SHISA5-216ENST00000494854 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
SHISA5-216ENST00000494854 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
SHISA5-216ENST00000494854 Q5VV11 94 aa8.32□□□□□ -1.08
SHISA5-216ENST00000494854 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
SHISA5-216ENST00000494854 BRK1Q8WUW1 75 aa8.3□□□□□ -1.08
SHISA5-216ENST00000494854 SPINK7P58062 85 aa8.27□□□□□ -1.09
SHISA5-216ENST00000494854 PRO0628Q9UI54 55 aa8.25□□□□□ -1.09
SHISA5-216ENST00000494854 ATP11AUNQ6ZP68 121 aa8.23□□□□□ -1.09
SHISA5-216ENST00000494854 RPL37P61927 97 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms