RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 K7ERS5 55 aa2.64□□□□□ -1.99
PRKD3-210ENST00000494667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.64□□□□□ -1.99
PRKD3-210ENST00000494667 ZNF462Q96JM2 2506 aa2.64□□□□□ -1.99
PRKD3-210ENST00000494667 USP9YO00507 2555 aaPredicted RBP2.64□□□□□ -1.99
PRKD3-210ENST00000494667 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
PRKD3-210ENST00000494667 LRRK2Q5S007 2527 aa2.63□□□□□ -1.99
PRKD3-210ENST00000494667 DNAH6Q9C0G6 4158 aa2.63□□□□□ -1.99
PRKD3-210ENST00000494667 IGF2RP11717 2491 aa2.63□□□□□ -1.99
PRKD3-210ENST00000494667 ZFHX2Q9C0A1 2572 aaPredicted RBP2.62□□□□□ -1.99
PRKD3-210ENST00000494667 HUWE1Q7Z6Z7 4374 aaKnown RBP2.62□□□□□ -1.99
PRKD3-210ENST00000494667 TYMSOSQ8TAI1 123 aa2.62□□□□□ -1.99
PRKD3-210ENST00000494667 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
PRKD3-210ENST00000494667 PIEZO1Q92508 2521 aa2.62□□□□□ -1.99
PRKD3-210ENST00000494667 NAV2Q8IVL1 2488 aa2.62□□□□□ -1.99
PRKD3-210ENST00000494667 PDZD2O15018 2839 aa2.61□□□□□ -1.99
PRKD3-210ENST00000494667 TTC28Q96AY4 2481 aa2.61□□□□□ -1.99
PRKD3-210ENST00000494667 APLNQ9ULZ1 77 aa2.61□□□□□ -1.99
PRKD3-210ENST00000494667 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
PRKD3-210ENST00000494667 SPINK6Q6UWN8 80 aa2.61□□□□□ -1.99
PRKD3-210ENST00000494667 UNC79Q9P2D8 2635 aa2.61□□□□□ -1.99
PRKD3-210ENST00000494667 LCE2CQ5TA81 110 aa2.6□□□□□ -1.99
PRKD3-210ENST00000494667 FLNCQ14315 2725 aa2.6□□□□□ -1.99
PRKD3-210ENST00000494667 VWFP04275 2813 aa2.6□□□□□ -1.99
PRKD3-210ENST00000494667 MUC6Q6W4X9 2439 aa2.6□□□□□ -1.99
PRKD3-210ENST00000494667 SRRM2Q9UQ35 2752 aaKnown RBP2.6□□□□□ -1.99
PRKD3-210ENST00000494667 RIF1Q5UIP0 2472 aaKnown RBP2.59□□□□□ -1.99
PRKD3-210ENST00000494667 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
PRKD3-210ENST00000494667 CHD8Q9HCK8 2581 aa2.59□□□□□ -1.99
PRKD3-210ENST00000494667 KRTAP3-1Q9BYR8 98 aa2.58□□□□□ -2
PRKD3-210ENST00000494667 HECTD4Q9Y4D8 3996 aa2.58□□□□□ -2
PRKD3-210ENST00000494667 NBDYA0A0U1RRE5 68 aa2.58□□□□□ -2
PRKD3-210ENST00000494667 NDUFAF8A1L188 74 aa2.58□□□□□ -2
PRKD3-210ENST00000494667 RPL37P61927 97 aaKnown RBP2.58□□□□□ -2
PRKD3-210ENST00000494667 CIRBP-AS1Q8TBR5 109 aa2.57□□□□□ -2
PRKD3-210ENST00000494667 HECTD1Q9ULT8 2610 aa2.57□□□□□ -2
PRKD3-210ENST00000494667 CSMD3Q7Z407 3707 aa2.57□□□□□ -2
PRKD3-210ENST00000494667 PKD1L1Q8TDX9 2849 aa2.57□□□□□ -2
PRKD3-210ENST00000494667 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
PRKD3-210ENST00000494667 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
PRKD3-210ENST00000494667 FLNAP21333 2647 aaKnown RBP2.56□□□□□ -2
PRKD3-210ENST00000494667 IGSF10Q6WRI0 2623 aa2.56□□□□□ -2
PRKD3-210ENST00000494667 Q8N1X5 172 aa2.55□□□□□ -2
PRKD3-210ENST00000494667 DNAH2Q9P225 4427 aa2.55□□□□□ -2
PRKD3-210ENST00000494667 TENM3Q9P273 2699 aa2.55□□□□□ -2
PRKD3-210ENST00000494667 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
PRKD3-210ENST00000494667 POLQO75417 2590 aa2.54□□□□□ -2
PRKD3-210ENST00000494667 PKD1L2Q7Z442 2459 aa2.54□□□□□ -2
PRKD3-210ENST00000494667 SPINK1P00995 79 aa2.54□□□□□ -2
PRKD3-210ENST00000494667 CENPEQ02224 2701 aa2.54□□□□□ -2
PRKD3-210ENST00000494667 KRTAP10-6P60371 365 aaPredicted RBP2.54□□□□□ -2
PRKD3-210ENST00000494667 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
PRKD3-210ENST00000494667 F8P00451 2351 aa2.54□□□□□ -2
PRKD3-210ENST00000494667 KRTAP24-1Q3LI83 254 aa2.54□□□□□ -2
PRKD3-210ENST00000494667 SETD2Q9BYW2 2564 aaPredicted RBP2.53□□□□□ -2
PRKD3-210ENST00000494667 SONP18583 2426 aaKnown RBP2.53□□□□□ -2
PRKD3-210ENST00000494667 SMR3AQ99954 134 aa2.53□□□□□ -2
PRKD3-210ENST00000494667 MTORP42345 2549 aa2.53□□□□□ -2
PRKD3-210ENST00000494667 XP32Q5T750 250 aa2.53□□□□□ -2
PRKD3-210ENST00000494667 UBE2DNLQ8IWF7 75 aa2.53□□□□□ -2
PRKD3-210ENST00000494667 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
PRKD3-210ENST00000494667 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
PRKD3-210ENST00000494667 CCDC168Q8NDH2 2452 aa2.52□□□□□ -2.01
PRKD3-210ENST00000494667 KRTAP1-4P0C5Y4 121 aa2.52□□□□□ -2.01
PRKD3-210ENST00000494667 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
PRKD3-210ENST00000494667 BAHCC1Q9P281 2608 aa2.5□□□□□ -2.01
PRKD3-210ENST00000494667 TENM1Q9UKZ4 2725 aa2.5□□□□□ -2.01
PRKD3-210ENST00000494667 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
PRKD3-210ENST00000494667 PLECQ15149 4684 aaKnown RBP2.49□□□□□ -2.01
PRKD3-210ENST00000494667 CACNA1AO00555 2505 aa2.49□□□□□ -2.01
PRKD3-210ENST00000494667 HELZ2Q9BYK8 2649 aaKnown RBP2.49□□□□□ -2.01
PRKD3-210ENST00000494667 NOTCH2Q04721 2471 aa2.48□□□□□ -2.01
PRKD3-210ENST00000494667 ABCA12Q86UK0 2595 aa2.48□□□□□ -2.01
PRKD3-210ENST00000494667 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
PRKD3-210ENST00000494667 S4R3F8 94 aa2.47□□□□□ -2.01
PRKD3-210ENST00000494667 PKHD1L1Q86WI1 4243 aa2.47□□□□□ -2.01
PRKD3-210ENST00000494667 LORP23490 312 aaPredicted RBP2.47□□□□□ -2.01
PRKD3-210ENST00000494667 ACACBO00763 2458 aa2.47□□□□□ -2.01
PRKD3-210ENST00000494667 TEP1Q99973 2627 aaKnown RBP2.46□□□□□ -2.02
PRKD3-210ENST00000494667 MYO18BQ8IUG5 2567 aa2.46□□□□□ -2.02
PRKD3-210ENST00000494667 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
PRKD3-210ENST00000494667 DNAH5Q8TE73 4624 aa2.45□□□□□ -2.02
PRKD3-210ENST00000494667 MAST4O15021 2626 aa2.44□□□□□ -2.02
PRKD3-210ENST00000494667 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
PRKD3-210ENST00000494667 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
PRKD3-210ENST00000494667 SEC61BP60468 96 aaKnown RBP2.44□□□□□ -2.02
PRKD3-210ENST00000494667 NSD1Q96L73 2696 aaPredicted RBP2.44□□□□□ -2.02
PRKD3-210ENST00000494667 FBN3Q75N90 2809 aa2.43□□□□□ -2.02
PRKD3-210ENST00000494667 KRTAP12-2P59991 146 aa2.43□□□□□ -2.02
PRKD3-210ENST00000494667 LOC100996750A0A140TA64 210 aa2.42□□□□□ -2.02
PRKD3-210ENST00000494667 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
PRKD3-210ENST00000494667 FAM208BQ5VWN6 2430 aa2.41□□□□□ -2.02
PRKD3-210ENST00000494667 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
PRKD3-210ENST00000494667 NBEAL1Q6ZS30 2694 aa2.41□□□□□ -2.02
PRKD3-210ENST00000494667 USP24Q9UPU5 2620 aa2.4□□□□□ -2.03
PRKD3-210ENST00000494667 MYCBP2O75592 4640 aa2.4□□□□□ -2.03
PRKD3-210ENST00000494667 M0QZ58 72 aa2.4□□□□□ -2.03
PRKD3-210ENST00000494667 TGP01266 2768 aa2.4□□□□□ -2.03
PRKD3-210ENST00000494667 J3QKU1 62 aa2.39□□□□□ -2.03
PRKD3-210ENST00000494667 ACANP16112 2415 aa2.39□□□□□ -2.03
PRKD3-210ENST00000494667 PKD1P98161 4303 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms