RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TMEM256-PLSCR3K7ERE1 68 aa4.92□□□□□ -1.62
MSH5-218ENST00000494646 COX6CP09669 75 aa4.92□□□□□ -1.62
MSH5-218ENST00000494646 TRBV7-4A0A0J9YYF1 115 aa4.91□□□□□ -1.62
MSH5-218ENST00000494646 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
MSH5-218ENST00000494646 TRBV20-1A0A075B6N2 111 aa4.9□□□□□ -1.63
MSH5-218ENST00000494646 CCKP06307 115 aa4.9□□□□□ -1.63
MSH5-218ENST00000494646 SCGB1C2P0DMR2 95 aa4.9□□□□□ -1.63
MSH5-218ENST00000494646 H3BQ85 93 aa4.89□□□□□ -1.63
MSH5-218ENST00000494646 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
MSH5-218ENST00000494646 UQCR10Q9UDW1 63 aa4.89□□□□□ -1.63
MSH5-218ENST00000494646 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
MSH5-218ENST00000494646 IGHV6-1A0A0B4J1U7 121 aa4.88□□□□□ -1.63
MSH5-218ENST00000494646 TRACP01848 142 aa4.88□□□□□ -1.63
MSH5-218ENST00000494646 LINC00472Q9H8W2 130 aa4.88□□□□□ -1.63
MSH5-218ENST00000494646 RBM3P98179 157 aaKnown RBP4.86□□□□□ -1.63
MSH5-218ENST00000494646 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
MSH5-218ENST00000494646 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
MSH5-218ENST00000494646 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
MSH5-218ENST00000494646 DSCR8Q96T75 97 aa4.84□□□□□ -1.63
MSH5-218ENST00000494646 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
MSH5-218ENST00000494646 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
MSH5-218ENST00000494646 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
MSH5-218ENST00000494646 C9JAW5 83 aa4.81□□□□□ -1.64
MSH5-218ENST00000494646 HRES1P13985 223 aa4.81□□□□□ -1.64
MSH5-218ENST00000494646 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
MSH5-218ENST00000494646 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
MSH5-218ENST00000494646 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
MSH5-218ENST00000494646 C8orf87E5RJ46 101 aa4.79□□□□□ -1.64
MSH5-218ENST00000494646 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
MSH5-218ENST00000494646 Q6ZQT0 140 aa4.78□□□□□ -1.64
MSH5-218ENST00000494646 J3KT08 172 aa4.76□□□□□ -1.65
MSH5-218ENST00000494646 ATXN8Q156A1 80 aa4.76□□□□□ -1.65
MSH5-218ENST00000494646 ZCCHC13Q8WW36 166 aaKnown RBP4.76□□□□□ -1.65
MSH5-218ENST00000494646 NDUFB1O75438 58 aa4.75□□□□□ -1.65
MSH5-218ENST00000494646 MT2AP02795 61 aa4.75□□□□□ -1.65
MSH5-218ENST00000494646 JMJD7-PLA2G4BH0Y9G9 81 aa4.74□□□□□ -1.65
MSH5-218ENST00000494646 M0R143 59 aa4.74□□□□□ -1.65
MSH5-218ENST00000494646 SPINK7P58062 85 aa4.74□□□□□ -1.65
MSH5-218ENST00000494646 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
MSH5-218ENST00000494646 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
MSH5-218ENST00000494646 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
MSH5-218ENST00000494646 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
MSH5-218ENST00000494646 LOC110117498A0A087WWA1 95 aa4.72□□□□□ -1.65
MSH5-218ENST00000494646 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
MSH5-218ENST00000494646 MT1FP04733 61 aa4.72□□□□□ -1.65
MSH5-218ENST00000494646 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
MSH5-218ENST00000494646 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
MSH5-218ENST00000494646 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
MSH5-218ENST00000494646 A8MWP4 228 aa4.71□□□□□ -1.66
MSH5-218ENST00000494646 BATFQ16520 125 aa4.7□□□□□ -1.66
MSH5-218ENST00000494646 NREPQ16612 68 aa4.7□□□□□ -1.66
MSH5-218ENST00000494646 PDE6GP18545 87 aa4.69□□□□□ -1.66
MSH5-218ENST00000494646 A0A1B0GW54 56 aa4.68□□□□□ -1.66
MSH5-218ENST00000494646 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
MSH5-218ENST00000494646 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
MSH5-218ENST00000494646 WFDC13Q8IUB5 93 aa4.67□□□□□ -1.66
MSH5-218ENST00000494646 PRR15Q8IV56 129 aa4.67□□□□□ -1.66
MSH5-218ENST00000494646 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
MSH5-218ENST00000494646 SMIM6P0DI80 62 aa4.65□□□□□ -1.67
MSH5-218ENST00000494646 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
MSH5-218ENST00000494646 TSTD3H0UI37 97 aa4.64□□□□□ -1.67
MSH5-218ENST00000494646 NDUFS5O43920 106 aa4.64□□□□□ -1.67
MSH5-218ENST00000494646 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
MSH5-218ENST00000494646 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
MSH5-218ENST00000494646 TMEM254Q8TBM7 123 aa4.63□□□□□ -1.67
MSH5-218ENST00000494646 hDV103S1A0JD37 113 aa4.62□□□□□ -1.67
MSH5-218ENST00000494646 K7EQZ3 153 aa4.62□□□□□ -1.67
MSH5-218ENST00000494646 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
MSH5-218ENST00000494646 TAX1BP3O14907 124 aa4.61□□□□□ -1.67
MSH5-218ENST00000494646 A0A1W2PPM0 123 aa4.6□□□□□ -1.67
MSH5-218ENST00000494646 H3BT86 120 aa4.6□□□□□ -1.67
MSH5-218ENST00000494646 BPY2O14599 106 aa4.59□□□□□ -1.67
MSH5-218ENST00000494646 IGKV2D-30A0A075B6S6 120 aa4.58□□□□□ -1.68
MSH5-218ENST00000494646 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
MSH5-218ENST00000494646 SCGB1A1P11684 91 aa4.58□□□□□ -1.68
MSH5-218ENST00000494646 Q5W150 140 aa4.58□□□□□ -1.68
MSH5-218ENST00000494646 Q8N9L7 120 aa4.58□□□□□ -1.68
MSH5-218ENST00000494646 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
MSH5-218ENST00000494646 PSPHP1O15172 72 aa4.57□□□□□ -1.68
MSH5-218ENST00000494646 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
MSH5-218ENST00000494646 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
MSH5-218ENST00000494646 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
MSH5-218ENST00000494646 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
MSH5-218ENST00000494646 HCG22E2RYF7 251 aa4.54□□□□□ -1.68
MSH5-218ENST00000494646 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
MSH5-218ENST00000494646 SPCS1Q9Y6A9 102 aa4.54□□□□□ -1.68
MSH5-218ENST00000494646 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
MSH5-218ENST00000494646 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
MSH5-218ENST00000494646 C7orf65Q6ZTY9 151 aa4.52□□□□□ -1.69
MSH5-218ENST00000494646 CXCL6P80162 114 aa4.51□□□□□ -1.69
MSH5-218ENST00000494646 LINC00846Q9NV44 126 aa4.5□□□□□ -1.69
MSH5-218ENST00000494646 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
MSH5-218ENST00000494646 UBL5Q9BZL1 73 aa4.47□□□□□ -1.69
MSH5-218ENST00000494646 PRO0461Q9UI25 63 aa4.46□□□□□ -1.7
MSH5-218ENST00000494646 COL5A1-AS1Q5SY13 56 aa4.44□□□□□ -1.7
MSH5-218ENST00000494646 K7EP34 96 aa4.43□□□□□ -1.7
MSH5-218ENST00000494646 MP68P56378 58 aa4.41□□□□□ -1.7
MSH5-218ENST00000494646 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
MSH5-218ENST00000494646 FAM236AA0A1B0GUQ0 79 aa4.4□□□□□ -1.71
MSH5-218ENST00000494646 FAM236BA0A1B0GV22 79 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms