RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 H3BPC8 53 aa6.65□□□□□ -1.35
CHMP3-209ENST00000494623 DNAH5Q8TE73 4624 aa6.65□□□□□ -1.35
CHMP3-209ENST00000494623 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
CHMP3-209ENST00000494623 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
CHMP3-209ENST00000494623 DNAH11Q96DT5 4516 aa6.64□□□□□ -1.35
CHMP3-209ENST00000494623 NDUFS5O43920 106 aa6.64□□□□□ -1.35
CHMP3-209ENST00000494623 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
CHMP3-209ENST00000494623 A0A087X002 238 aa6.63□□□□□ -1.35
CHMP3-209ENST00000494623 ASB16-AS1Q495Z4 193 aa6.63□□□□□ -1.35
CHMP3-209ENST00000494623 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
CHMP3-209ENST00000494623 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
CHMP3-209ENST00000494623 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
CHMP3-209ENST00000494623 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
CHMP3-209ENST00000494623 PCOTHQ58A44 107 aa6.59□□□□□ -1.35
CHMP3-209ENST00000494623 MRPL34Q9BQ48 92 aaKnown RBP6.59□□□□□ -1.35
CHMP3-209ENST00000494623 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.36
CHMP3-209ENST00000494623 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
CHMP3-209ENST00000494623 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
CHMP3-209ENST00000494623 SSBP3-AS1Q7Z2R9 100 aa6.57□□□□□ -1.36
CHMP3-209ENST00000494623 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
CHMP3-209ENST00000494623 H3BS24 57 aa6.56□□□□□ -1.36
CHMP3-209ENST00000494623 Q1T7F1 81 aa6.54□□□□□ -1.36
CHMP3-209ENST00000494623 PKD1P98161 4303 aa6.53□□□□□ -1.36
CHMP3-209ENST00000494623 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
CHMP3-209ENST00000494623 Q6ZSA8 131 aa6.53□□□□□ -1.36
CHMP3-209ENST00000494623 PSPHP1O15172 72 aa6.52□□□□□ -1.37
CHMP3-209ENST00000494623 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
CHMP3-209ENST00000494623 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
CHMP3-209ENST00000494623 FAT2Q9NYQ8 4349 aa6.51□□□□□ -1.37
CHMP3-209ENST00000494623 A8MU10 97 aa6.5□□□□□ -1.37
CHMP3-209ENST00000494623 Q5W150 140 aa6.49□□□□□ -1.37
CHMP3-209ENST00000494623 COA5Q86WW8 74 aa6.48□□□□□ -1.37
CHMP3-209ENST00000494623 LINC00313P59037 77 aa6.47□□□□□ -1.37
CHMP3-209ENST00000494623 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
CHMP3-209ENST00000494623 A8MUN3 132 aa6.46□□□□□ -1.38
CHMP3-209ENST00000494623 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
CHMP3-209ENST00000494623 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
CHMP3-209ENST00000494623 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
CHMP3-209ENST00000494623 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
CHMP3-209ENST00000494623 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
CHMP3-209ENST00000494623 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
CHMP3-209ENST00000494623 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
CHMP3-209ENST00000494623 HRES1P13985 223 aa6.4□□□□□ -1.38
CHMP3-209ENST00000494623 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
CHMP3-209ENST00000494623 TYMSOSQ8TAI1 123 aa6.4□□□□□ -1.39
CHMP3-209ENST00000494623 Q5VV11 94 aa6.39□□□□□ -1.39
CHMP3-209ENST00000494623 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
CHMP3-209ENST00000494623 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
CHMP3-209ENST00000494623 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
CHMP3-209ENST00000494623 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
CHMP3-209ENST00000494623 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
CHMP3-209ENST00000494623 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
CHMP3-209ENST00000494623 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
CHMP3-209ENST00000494623 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
CHMP3-209ENST00000494623 PKHD1P08F94 4074 aa6.36□□□□□ -1.39
CHMP3-209ENST00000494623 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
CHMP3-209ENST00000494623 SMR3BP02814 79 aaPredicted RBP6.35□□□□□ -1.39
CHMP3-209ENST00000494623 SPINK1P00995 79 aa6.33□□□□□ -1.4
CHMP3-209ENST00000494623 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
CHMP3-209ENST00000494623 A6NN06 94 aa6.32□□□□□ -1.4
CHMP3-209ENST00000494623 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
CHMP3-209ENST00000494623 ACYP2P14621 99 aa6.31□□□□□ -1.4
CHMP3-209ENST00000494623 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
CHMP3-209ENST00000494623 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
CHMP3-209ENST00000494623 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
CHMP3-209ENST00000494623 LCA10Q71F78 164 aa6.29□□□□□ -1.4
CHMP3-209ENST00000494623 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
CHMP3-209ENST00000494623 LINC00304Q8N9R0 145 aa6.29□□□□□ -1.4
CHMP3-209ENST00000494623 Q75L30 129 aa6.28□□□□□ -1.4
CHMP3-209ENST00000494623 A6NED7 52 aa6.27□□□□□ -1.41
CHMP3-209ENST00000494623 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
CHMP3-209ENST00000494623 FAT1Q14517 4588 aa6.26□□□□□ -1.41
CHMP3-209ENST00000494623 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
CHMP3-209ENST00000494623 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.42
CHMP3-209ENST00000494623 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
CHMP3-209ENST00000494623 SPINK7P58062 85 aa6.19□□□□□ -1.42
CHMP3-209ENST00000494623 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
CHMP3-209ENST00000494623 RYR2Q92736 4967 aa6.18□□□□□ -1.42
CHMP3-209ENST00000494623 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-209ENST00000494623 LCE2BO14633 110 aa6.17□□□□□ -1.42
CHMP3-209ENST00000494623 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
CHMP3-209ENST00000494623 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
CHMP3-209ENST00000494623 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
CHMP3-209ENST00000494623 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
CHMP3-209ENST00000494623 Q8N1X5 172 aa6.13□□□□□ -1.43
CHMP3-209ENST00000494623 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
CHMP3-209ENST00000494623 A0A1B0GU69 56 aa6.12□□□□□ -1.43
CHMP3-209ENST00000494623 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
CHMP3-209ENST00000494623 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
CHMP3-209ENST00000494623 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
CHMP3-209ENST00000494623 A8MUU9 505 aa6.08□□□□□ -1.44
CHMP3-209ENST00000494623 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
CHMP3-209ENST00000494623 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
CHMP3-209ENST00000494623 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
CHMP3-209ENST00000494623 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
CHMP3-209ENST00000494623 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
CHMP3-209ENST00000494623 UQCR11O14957 56 aa5.99□□□□□ -1.45
CHMP3-209ENST00000494623 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
CHMP3-209ENST00000494623 Q5VSD8 79 aa5.98□□□□□ -1.45
CHMP3-209ENST00000494623 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms