RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 LYRM7Q5U5X0 104 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 Q5W150 140 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 C2orf91Q6ZV80 131 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-219ENST00000494323 IFITM1P13164 125 aa2.67□□□□□ -1.98
PTCD3-219ENST00000494323 CD164Q04900 197 aa2.67□□□□□ -1.98
PTCD3-219ENST00000494323 COX7BP24311 80 aa2.66□□□□□ -1.98
PTCD3-219ENST00000494323 LINC00308Q8TCZ7 52 aa2.66□□□□□ -1.98
PTCD3-219ENST00000494323 SPANXDQ9BXN6 97 aa2.66□□□□□ -1.98
PTCD3-219ENST00000494323 SPANXCQ9NY87 97 aa2.66□□□□□ -1.98
PTCD3-219ENST00000494323 TEX49A0A1B0GTD5 131 aa2.65□□□□□ -1.99
PTCD3-219ENST00000494323 BPY2O14599 106 aa2.65□□□□□ -1.99
PTCD3-219ENST00000494323 C6orf99Q4VX62 202 aa2.65□□□□□ -1.99
PTCD3-219ENST00000494323 Q5XG85 94 aa2.65□□□□□ -1.99
PTCD3-219ENST00000494323 GTF2H5Q6ZYL4 71 aa2.65□□□□□ -1.99
PTCD3-219ENST00000494323 CBY1Q9Y3M2 126 aa2.65□□□□□ -1.99
PTCD3-219ENST00000494323 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
PTCD3-219ENST00000494323 ELOF1P60002 83 aaKnown RBP2.64□□□□□ -1.99
PTCD3-219ENST00000494323 RAB37Q96AX2 223 aa2.64□□□□□ -1.99
PTCD3-219ENST00000494323 TTTY13Q9BZ97 58 aa2.64□□□□□ -1.99
PTCD3-219ENST00000494323 NHP2Q9NX24 153 aaKnown RBP2.64□□□□□ -1.99
PTCD3-219ENST00000494323 TAX1BP3O14907 124 aa2.63□□□□□ -1.99
PTCD3-219ENST00000494323 FABP2P12104 132 aa2.63□□□□□ -1.99
PTCD3-219ENST00000494323 FXYD2P54710 66 aa2.63□□□□□ -1.99
PTCD3-219ENST00000494323 ATP11AUNQ6ZP68 121 aa2.63□□□□□ -1.99
PTCD3-219ENST00000494323 C8orf17Q9NRJ1 99 aa2.63□□□□□ -1.99
PTCD3-219ENST00000494323 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
PTCD3-219ENST00000494323 USH2AO75445 5202 aa2.62□□□□□ -1.99
PTCD3-219ENST00000494323 A0A1B0GV90 55 aa2.62□□□□□ -1.99
PTCD3-219ENST00000494323 TCL1BO95988 128 aa2.62□□□□□ -1.99
PTCD3-219ENST00000494323 COX6CP09669 75 aa2.62□□□□□ -1.99
PTCD3-219ENST00000494323 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
PTCD3-219ENST00000494323 PRO1854Q9UHT4 67 aa2.62□□□□□ -1.99
PTCD3-219ENST00000494323 IGLV5-48A0A075B6I7 105 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 TRBV20-1A0A075B6N2 111 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 TRAV13-2A0A0B4J235 113 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 TRBV7-6A0A0J9YX20 115 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 A0A1W2PPM0 123 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 H3BUT2 72 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 MUSTN1Q8IVN3 82 aa2.61□□□□□ -1.99
PTCD3-219ENST00000494323 FAM240AA0A1B0GVK7 77 aa2.6□□□□□ -1.99
PTCD3-219ENST00000494323 K7EP34 96 aa2.6□□□□□ -1.99
PTCD3-219ENST00000494323 Q96NJ1 140 aa2.6□□□□□ -1.99
PTCD3-219ENST00000494323 SPCS1Q9Y6A9 102 aa2.6□□□□□ -1.99
PTCD3-219ENST00000494323 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-219ENST00000494323 PSPHP1O15172 72 aa2.59□□□□□ -1.99
PTCD3-219ENST00000494323 SNCGO76070 127 aa2.59□□□□□ -1.99
PTCD3-219ENST00000494323 MT2AP02795 61 aa2.59□□□□□ -1.99
PTCD3-219ENST00000494323 PSMB2P49721 201 aa2.59□□□□□ -1.99
PTCD3-219ENST00000494323 TRBV7-7A0A0K0K1E9 115 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 F8W1H4 67 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 K7ERJ3 54 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 SCGB1C2P0DMR2 95 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 ATXN8Q156A1 80 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 IGFL1Q6UW32 110 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 SMIM11BQ8TCY0 68 aa2.58□□□□□ -2
PTCD3-219ENST00000494323 A0A1B0GX51 115 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 F8WEM9 126 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 H0YGX0 51 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 J3QR89 54 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 MT1FP04733 61 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 KRTAP10-10P60014 251 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 OCIAD2Q56VL3 154 aa2.57□□□□□ -2
PTCD3-219ENST00000494323 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 H3BQ85 93 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 H3BT86 120 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 LST1O00453 97 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 DNAL4O96015 105 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 TRACP01848 142 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 Q6JHZ5 121 aa2.56□□□□□ -2
PTCD3-219ENST00000494323 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
PTCD3-219ENST00000494323 hADV29S1A0JD25 119 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 H3BMG7 143 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 K7ERU9 68 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 NDUFS5O43920 106 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 C5orf47Q569G3 176 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 LINC00575Q6W349 94 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 Q6ZQY7 126 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 CLEC2BQ92478 149 aa2.55□□□□□ -2
PTCD3-219ENST00000494323 NAA38Q9BRA0 125 aaKnown RBP2.55□□□□□ -2
PTCD3-219ENST00000494323 FAM236DA0A1B0GTK5 79 aa2.54□□□□□ -2
PTCD3-219ENST00000494323 A8MUU9 505 aa2.54□□□□□ -2
PTCD3-219ENST00000494323 FAM236CP0DP71 79 aa2.54□□□□□ -2
PTCD3-219ENST00000494323 C20orf166-AS1Q96NR2 134 aa2.54□□□□□ -2
PTCD3-219ENST00000494323 C9JAW5 83 aa2.53□□□□□ -2
PTCD3-219ENST00000494323 TEN1Q86WV5 123 aa2.53□□□□□ -2
PTCD3-219ENST00000494323 ANKRD29Q8N6D5 301 aa2.53□□□□□ -2
PTCD3-219ENST00000494323 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
PTCD3-219ENST00000494323 PPDPFLQ8WWR9 84 aa2.52□□□□□ -2.01
PTCD3-219ENST00000494323 ORMDL1Q9P0S3 153 aa2.52□□□□□ -2.01
PTCD3-219ENST00000494323 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
PTCD3-219ENST00000494323 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-219ENST00000494323 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
PTCD3-219ENST00000494323 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
PTCD3-219ENST00000494323 A0A087WSZ3 146 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 JMJD7-PLA2G4BH0Y9G9 81 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 TMEM256-PLSCR3K7ERE1 68 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 HRES1P13985 223 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 LINC00313P59037 77 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms