RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 TRGC2P03986 189 aa3.96□□□□□ -1.78
NR1H3-225ENST00000494018 RBM3P98179 157 aaKnown RBP3.96□□□□□ -1.78
NR1H3-225ENST00000494018 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
NR1H3-225ENST00000494018 LCA10Q71F78 164 aa3.95□□□□□ -1.78
NR1H3-225ENST00000494018 SYS1-DBNDD2H3BUS1 97 aa3.94□□□□□ -1.78
NR1H3-225ENST00000494018 IFITM1P13164 125 aa3.94□□□□□ -1.78
NR1H3-225ENST00000494018 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
NR1H3-225ENST00000494018 LINC01545Q5VT33 79 aa3.93□□□□□ -1.78
NR1H3-225ENST00000494018 RAB37Q96AX2 223 aa3.93□□□□□ -1.78
NR1H3-225ENST00000494018 C12orf57Q99622 126 aa3.93□□□□□ -1.78
NR1H3-225ENST00000494018 PET117Q6UWS5 81 aa3.92□□□□□ -1.78
NR1H3-225ENST00000494018 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
NR1H3-225ENST00000494018 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
NR1H3-225ENST00000494018 C4orf26Q17RF5 130 aa3.91□□□□□ -1.78
NR1H3-225ENST00000494018 DSCR8Q96T75 97 aa3.91□□□□□ -1.78
NR1H3-225ENST00000494018 FABP2P12104 132 aa3.9□□□□□ -1.79
NR1H3-225ENST00000494018 CSAG1Q6PB30 78 aa3.9□□□□□ -1.79
NR1H3-225ENST00000494018 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
NR1H3-225ENST00000494018 S4R3F8 94 aa3.88□□□□□ -1.79
NR1H3-225ENST00000494018 ANKRD29Q8N6D5 301 aa3.87□□□□□ -1.79
NR1H3-225ENST00000494018 TRBV7-4A0A0J9YYF1 115 aa3.86□□□□□ -1.79
NR1H3-225ENST00000494018 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BNQ99877 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 HIST1H2BMQ99879 126 aa3.85□□□□□ -1.79
NR1H3-225ENST00000494018 TRACP01848 142 aa3.84□□□□□ -1.79
NR1H3-225ENST00000494018 CCKP06307 115 aa3.84□□□□□ -1.79
NR1H3-225ENST00000494018 BVES-AS1Q5T3Y7 98 aa3.84□□□□□ -1.79
NR1H3-225ENST00000494018 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
NR1H3-225ENST00000494018 SNRPEP62304 92 aaKnown RBP3.83□□□□□ -1.8
NR1H3-225ENST00000494018 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
NR1H3-225ENST00000494018 KRTDAPP60985 99 aa3.82□□□□□ -1.8
NR1H3-225ENST00000494018 VPS25Q9BRG1 176 aa3.82□□□□□ -1.8
NR1H3-225ENST00000494018 COA6Q5JTJ3 125 aaKnown RBP3.81□□□□□ -1.8
NR1H3-225ENST00000494018 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
NR1H3-225ENST00000494018 KRTAP3-1Q9BYR8 98 aa3.81□□□□□ -1.8
NR1H3-225ENST00000494018 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
NR1H3-225ENST00000494018 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
NR1H3-225ENST00000494018 Q6ZVQ6 151 aa3.8□□□□□ -1.8
NR1H3-225ENST00000494018 SNCGO76070 127 aa3.79□□□□□ -1.8
NR1H3-225ENST00000494018 C7orf65Q6ZTY9 151 aa3.79□□□□□ -1.8
NR1H3-225ENST00000494018 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
NR1H3-225ENST00000494018 NDUFS5O43920 106 aa3.78□□□□□ -1.8
NR1H3-225ENST00000494018 ATOH7Q8N100 152 aa3.78□□□□□ -1.8
NR1H3-225ENST00000494018 NDUFB1O75438 58 aa3.77□□□□□ -1.81
NR1H3-225ENST00000494018 Q5W150 140 aa3.77□□□□□ -1.81
NR1H3-225ENST00000494018 C2orf91Q6ZV80 131 aa3.77□□□□□ -1.81
NR1H3-225ENST00000494018 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
NR1H3-225ENST00000494018 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
NR1H3-225ENST00000494018 HSBP1L1C9JCN9 74 aa3.75□□□□□ -1.81
NR1H3-225ENST00000494018 H0YGX0 51 aa3.74□□□□□ -1.81
NR1H3-225ENST00000494018 J3KT08 172 aa3.74□□□□□ -1.81
NR1H3-225ENST00000494018 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
NR1H3-225ENST00000494018 A0A1B0GX51 115 aa3.73□□□□□ -1.81
NR1H3-225ENST00000494018 A8MUN3 132 aa3.73□□□□□ -1.81
NR1H3-225ENST00000494018 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
NR1H3-225ENST00000494018 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
NR1H3-225ENST00000494018 K7EQZ3 153 aa3.71□□□□□ -1.82
NR1H3-225ENST00000494018 PDE6GP18545 87 aa3.71□□□□□ -1.82
NR1H3-225ENST00000494018 C1orf64Q8NEQ6 169 aa3.71□□□□□ -1.82
NR1H3-225ENST00000494018 A0A0B4J2C4 111 aa3.69□□□□□ -1.82
NR1H3-225ENST00000494018 H3BQ85 93 aa3.69□□□□□ -1.82
NR1H3-225ENST00000494018 DLEU1O43261 78 aa3.68□□□□□ -1.82
NR1H3-225ENST00000494018 TMEM254Q8TBM7 123 aa3.68□□□□□ -1.82
NR1H3-225ENST00000494018 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
NR1H3-225ENST00000494018 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
NR1H3-225ENST00000494018 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
NR1H3-225ENST00000494018 A0A087WVE0 104 aa3.66□□□□□ -1.82
NR1H3-225ENST00000494018 COX8AP10176 69 aa3.66□□□□□ -1.82
NR1H3-225ENST00000494018 S100A2P29034 98 aa3.66□□□□□ -1.82
NR1H3-225ENST00000494018 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
NR1H3-225ENST00000494018 HIST1H2BLQ99880 126 aa3.66□□□□□ -1.82
NR1H3-225ENST00000494018 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
NR1H3-225ENST00000494018 DNAL4O96015 105 aa3.65□□□□□ -1.83
NR1H3-225ENST00000494018 HIST3H2BBQ8N257 126 aa3.65□□□□□ -1.83
NR1H3-225ENST00000494018 HIGD1BQ9P298 99 aa3.65□□□□□ -1.83
NR1H3-225ENST00000494018 TMEM238LA0A1B0GVL6 79 aa3.64□□□□□ -1.83
NR1H3-225ENST00000494018 A6NJY4 79 aa3.64□□□□□ -1.83
NR1H3-225ENST00000494018 C21orf62-AS1Q17RA5 79 aa3.64□□□□□ -1.83
NR1H3-225ENST00000494018 Q6ZQT0 140 aa3.64□□□□□ -1.83
NR1H3-225ENST00000494018 ORMDL1Q9P0S3 153 aa3.64□□□□□ -1.83
NR1H3-225ENST00000494018 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
NR1H3-225ENST00000494018 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
NR1H3-225ENST00000494018 H0YAA0 97 aa3.62□□□□□ -1.83
NR1H3-225ENST00000494018 TMEM256-PLSCR3K7ERE1 68 aa3.62□□□□□ -1.83
NR1H3-225ENST00000494018 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
NR1H3-225ENST00000494018 TRIAP1O43715 76 aa3.61□□□□□ -1.83
NR1H3-225ENST00000494018 UBE2V1Q13404 147 aa3.6□□□□□ -1.83
NR1H3-225ENST00000494018 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
NR1H3-225ENST00000494018 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
NR1H3-225ENST00000494018 CEND1Q8N111 149 aa3.59□□□□□ -1.83
NR1H3-225ENST00000494018 MT1EP04732 61 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms