RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 J3KT08 172 aa7.18□□□□□ -1.26
VPS52-220ENST00000493674 BPY2O14599 106 aa7.18□□□□□ -1.26
VPS52-220ENST00000493674 DEFB116Q30KQ4 102 aa7.16□□□□□ -1.26
VPS52-220ENST00000493674 A8MWP4 228 aa7.14□□□□□ -1.27
VPS52-220ENST00000493674 IGKV4-1P06312 121 aa7.14□□□□□ -1.27
VPS52-220ENST00000493674 K7EQZ3 153 aa7.12□□□□□ -1.27
VPS52-220ENST00000493674 Q8N9L7 120 aa7.11□□□□□ -1.27
VPS52-220ENST00000493674 PRR15Q8IV56 129 aa7.1□□□□□ -1.27
VPS52-220ENST00000493674 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
VPS52-220ENST00000493674 UQCRQO14949 82 aa7.09□□□□□ -1.27
VPS52-220ENST00000493674 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
VPS52-220ENST00000493674 FAM236AA0A1B0GUQ0 79 aa7.08□□□□□ -1.28
VPS52-220ENST00000493674 FAM236BA0A1B0GV22 79 aa7.08□□□□□ -1.28
VPS52-220ENST00000493674 NDUFB1O75438 58 aa7.07□□□□□ -1.28
VPS52-220ENST00000493674 A0A087WVE0 104 aa7.06□□□□□ -1.28
VPS52-220ENST00000493674 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
VPS52-220ENST00000493674 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
VPS52-220ENST00000493674 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
VPS52-220ENST00000493674 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
VPS52-220ENST00000493674 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
VPS52-220ENST00000493674 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
VPS52-220ENST00000493674 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
VPS52-220ENST00000493674 ATOX1O00244 68 aa7.03□□□□□ -1.28
VPS52-220ENST00000493674 COX7CP15954 63 aa7.03□□□□□ -1.28
VPS52-220ENST00000493674 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
VPS52-220ENST00000493674 C8orf17Q9NRJ1 99 aa7.03□□□□□ -1.28
VPS52-220ENST00000493674 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
VPS52-220ENST00000493674 HCG22E2RYF7 251 aa7.01□□□□□ -1.29
VPS52-220ENST00000493674 KRTAP16-1A8MUX0 517 aa6.99□□□□□ -1.29
VPS52-220ENST00000493674 LINC00313P59037 77 aa6.97□□□□□ -1.29
VPS52-220ENST00000493674 TMEM258P61165 79 aa6.97□□□□□ -1.29
VPS52-220ENST00000493674 CASC2Q6XLA1 102 aa6.97□□□□□ -1.29
VPS52-220ENST00000493674 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
VPS52-220ENST00000493674 hDV103S1A0JD37 113 aa6.96□□□□□ -1.3
VPS52-220ENST00000493674 WFDC13Q8IUB5 93 aa6.96□□□□□ -1.3
VPS52-220ENST00000493674 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
VPS52-220ENST00000493674 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
VPS52-220ENST00000493674 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
VPS52-220ENST00000493674 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
VPS52-220ENST00000493674 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
VPS52-220ENST00000493674 LRP2P98164 4655 aa6.91□□□□□ -1.3
VPS52-220ENST00000493674 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
VPS52-220ENST00000493674 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
VPS52-220ENST00000493674 PRR4Q16378 134 aa6.9□□□□□ -1.3
VPS52-220ENST00000493674 OCR1Q9BZK8 76 aa6.9□□□□□ -1.3
VPS52-220ENST00000493674 A8MUU9 505 aa6.88□□□□□ -1.31
VPS52-220ENST00000493674 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
VPS52-220ENST00000493674 LPAP08519 4548 aa6.85□□□□□ -1.31
VPS52-220ENST00000493674 XP32Q5T750 250 aa6.85□□□□□ -1.31
VPS52-220ENST00000493674 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
VPS52-220ENST00000493674 Q75L30 129 aa6.84□□□□□ -1.31
VPS52-220ENST00000493674 TP53AIP1Q9HCN2 124 aa6.84□□□□□ -1.31
VPS52-220ENST00000493674 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
VPS52-220ENST00000493674 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
VPS52-220ENST00000493674 NDUFS5O43920 106 aa6.8□□□□□ -1.32
VPS52-220ENST00000493674 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
VPS52-220ENST00000493674 Q5W150 140 aa6.79□□□□□ -1.32
VPS52-220ENST00000493674 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
VPS52-220ENST00000493674 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
VPS52-220ENST00000493674 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.33
VPS52-220ENST00000493674 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
VPS52-220ENST00000493674 TRAV22A0A0B4J277 110 aa6.75□□□□□ -1.33
VPS52-220ENST00000493674 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
VPS52-220ENST00000493674 H0Y9P7 68 aa6.73□□□□□ -1.33
VPS52-220ENST00000493674 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
VPS52-220ENST00000493674 H3BPC8 53 aa6.71□□□□□ -1.34
VPS52-220ENST00000493674 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
VPS52-220ENST00000493674 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
VPS52-220ENST00000493674 MP68P56378 58 aa6.69□□□□□ -1.34
VPS52-220ENST00000493674 KLKP1Q107X0 134 aa6.69□□□□□ -1.34
VPS52-220ENST00000493674 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
VPS52-220ENST00000493674 H7BZZ5 65 aa6.68□□□□□ -1.34
VPS52-220ENST00000493674 NDUFC1O43677 76 aa6.68□□□□□ -1.34
VPS52-220ENST00000493674 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
VPS52-220ENST00000493674 PRO0628Q9UI54 55 aa6.68□□□□□ -1.34
VPS52-220ENST00000493674 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
VPS52-220ENST00000493674 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
VPS52-220ENST00000493674 LOC101927531A0A1B0GV80 90 aa6.66□□□□□ -1.34
VPS52-220ENST00000493674 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
VPS52-220ENST00000493674 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
VPS52-220ENST00000493674 PCOTHQ58A44 107 aa6.65□□□□□ -1.34
VPS52-220ENST00000493674 C1orf64Q8NEQ6 169 aa6.65□□□□□ -1.34
VPS52-220ENST00000493674 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
VPS52-220ENST00000493674 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
VPS52-220ENST00000493674 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
VPS52-220ENST00000493674 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
VPS52-220ENST00000493674 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.35
VPS52-220ENST00000493674 SPINK7P58062 85 aa6.58□□□□□ -1.36
VPS52-220ENST00000493674 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
VPS52-220ENST00000493674 MUC2Q02817 5179 aa6.54□□□□□ -1.36
VPS52-220ENST00000493674 HRES1P13985 223 aa6.52□□□□□ -1.37
VPS52-220ENST00000493674 MPLKIPQ8TAP9 179 aa6.5□□□□□ -1.37
VPS52-220ENST00000493674 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
VPS52-220ENST00000493674 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
VPS52-220ENST00000493674 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
VPS52-220ENST00000493674 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
VPS52-220ENST00000493674 V9GYY9 64 aa6.42□□□□□ -1.38
VPS52-220ENST00000493674 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
VPS52-220ENST00000493674 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
VPS52-220ENST00000493674 A8MUN3 132 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms