RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 CD164Q04900 197 aa11.1□□□□□ -0.63
TSC22D4-205ENST00000493217 SSBP3-AS1Q7Z2R9 100 aa11.1□□□□□ -0.63
TSC22D4-205ENST00000493217 LRP1BQ9NZR2 4599 aa11.09□□□□□ -0.63
TSC22D4-205ENST00000493217 SPANXA2-OT1Q8N9U9 137 aa11.08□□□□□ -0.64
TSC22D4-205ENST00000493217 A0A087X002 238 aa11.07□□□□□ -0.64
TSC22D4-205ENST00000493217 NOTCH2NLQ7Z3S9 236 aa11.07□□□□□ -0.64
TSC22D4-205ENST00000493217 KRTAP21-3Q3LHN1 58 aa11.05□□□□□ -0.64
TSC22D4-205ENST00000493217 MRPL34Q9BQ48 92 aaKnown RBP11.05□□□□□ -0.64
TSC22D4-205ENST00000493217 MPLKIPQ8TAP9 179 aa11.04□□□□□ -0.64
TSC22D4-205ENST00000493217 SPINK6Q6UWN8 80 aa11.02□□□□□ -0.64
TSC22D4-205ENST00000493217 NDUFS5O43920 106 aa11.01□□□□□ -0.65
TSC22D4-205ENST00000493217 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
TSC22D4-205ENST00000493217 VPS13BQ7Z7G8 4022 aa10.97□□□□□ -0.65
TSC22D4-205ENST00000493217 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
TSC22D4-205ENST00000493217 IGLV7-46A0A075B6I9 117 aa10.95□□□□□ -0.66
TSC22D4-205ENST00000493217 Q1T7F1 81 aa10.94□□□□□ -0.66
TSC22D4-205ENST00000493217 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
TSC22D4-205ENST00000493217 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
TSC22D4-205ENST00000493217 C8orf87E5RJ46 101 aa10.89□□□□□ -0.67
TSC22D4-205ENST00000493217 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
TSC22D4-205ENST00000493217 KRTAP13-3Q3SY46 172 aa10.86□□□□□ -0.67
TSC22D4-205ENST00000493217 Q5W150 140 aa10.86□□□□□ -0.67
TSC22D4-205ENST00000493217 PKHD1P08F94 4074 aa10.85□□□□□ -0.67
TSC22D4-205ENST00000493217 SACSQ9NZJ4 4579 aa10.84□□□□□ -0.67
TSC22D4-205ENST00000493217 LINC00313P59037 77 aa10.83□□□□□ -0.68
TSC22D4-205ENST00000493217 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
TSC22D4-205ENST00000493217 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
TSC22D4-205ENST00000493217 COA5Q86WW8 74 aa10.8□□□□□ -0.68
TSC22D4-205ENST00000493217 Q8N9P0 234 aaPredicted RBP10.8□□□□□ -0.68
TSC22D4-205ENST00000493217 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
TSC22D4-205ENST00000493217 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
TSC22D4-205ENST00000493217 V9GYY9 64 aa10.78□□□□□ -0.68
TSC22D4-205ENST00000493217 BRK1Q8WUW1 75 aa10.76□□□□□ -0.69
TSC22D4-205ENST00000493217 PSPHP1O15172 72 aa10.75□□□□□ -0.69
TSC22D4-205ENST00000493217 TYMSOSQ8TAI1 123 aa10.74□□□□□ -0.69
TSC22D4-205ENST00000493217 KRTAP16-1A8MUX0 517 aa10.72□□□□□ -0.69
TSC22D4-205ENST00000493217 FAM229AH3BQW9 127 aa10.71□□□□□ -0.69
TSC22D4-205ENST00000493217 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.69
TSC22D4-205ENST00000493217 SPINK1P00995 79 aa10.7□□□□□ -0.7
TSC22D4-205ENST00000493217 A8MUN3 132 aa10.69□□□□□ -0.7
TSC22D4-205ENST00000493217 HRES1P13985 223 aa10.68□□□□□ -0.7
TSC22D4-205ENST00000493217 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
TSC22D4-205ENST00000493217 Q5VV11 94 aa10.65□□□□□ -0.7
TSC22D4-205ENST00000493217 A0A1B0GVY2 172 aa10.63□□□□□ -0.71
TSC22D4-205ENST00000493217 PRR26Q8N8Z3 221 aa10.63□□□□□ -0.71
TSC22D4-205ENST00000493217 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
TSC22D4-205ENST00000493217 SMR3BP02814 79 aaPredicted RBP10.62□□□□□ -0.71
TSC22D4-205ENST00000493217 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
TSC22D4-205ENST00000493217 RPS29P62273 56 aaKnown RBP10.59□□□□□ -0.71
TSC22D4-205ENST00000493217 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
TSC22D4-205ENST00000493217 PRR15LQ9BU68 103 aa10.59□□□□□ -0.71
TSC22D4-205ENST00000493217 APOBP04114 4563 aaKnown RBP10.57□□□□□ -0.72
TSC22D4-205ENST00000493217 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
TSC22D4-205ENST00000493217 FAT1Q14517 4588 aa10.56□□□□□ -0.72
TSC22D4-205ENST00000493217 ACYP2P14621 99 aa10.54□□□□□ -0.72
TSC22D4-205ENST00000493217 KRTAP10-4P60372 401 aaPredicted RBP10.54□□□□□ -0.72
TSC22D4-205ENST00000493217 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
TSC22D4-205ENST00000493217 LINC01558Q9Y6Z2 57 aa10.54□□□□□ -0.72
TSC22D4-205ENST00000493217 CHKB-CPT1BH3BT56 60 aa10.51□□□□□ -0.73
TSC22D4-205ENST00000493217 Q75L30 129 aa10.51□□□□□ -0.73
TSC22D4-205ENST00000493217 RYR2Q92736 4967 aa10.49□□□□□ -0.73
TSC22D4-205ENST00000493217 PKHD1L1Q86WI1 4243 aa10.49□□□□□ -0.73
TSC22D4-205ENST00000493217 IGKV2D-30A0A075B6S6 120 aa10.46□□□□□ -0.74
TSC22D4-205ENST00000493217 KMT2CQ8NEZ4 4911 aaKnown RBP10.43□□□□□ -0.74
TSC22D4-205ENST00000493217 A8MU10 97 aa10.42□□□□□ -0.74
TSC22D4-205ENST00000493217 A6NED7 52 aa10.37□□□□□ -0.75
TSC22D4-205ENST00000493217 LCA10Q71F78 164 aa10.35□□□□□ -0.75
TSC22D4-205ENST00000493217 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
TSC22D4-205ENST00000493217 C9orf92A6NGG3 77 aa10.3□□□□□ -0.76
TSC22D4-205ENST00000493217 C20orf166-AS1Q96NR2 134 aa10.3□□□□□ -0.76
TSC22D4-205ENST00000493217 A8MUU9 505 aa10.3□□□□□ -0.76
TSC22D4-205ENST00000493217 SPINK7P58062 85 aa10.28□□□□□ -0.76
TSC22D4-205ENST00000493217 CDC42SE1Q9NRR8 79 aa10.28□□□□□ -0.76
TSC22D4-205ENST00000493217 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
TSC22D4-205ENST00000493217 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.77
TSC22D4-205ENST00000493217 Q8N1X5 172 aa10.19□□□□□ -0.78
TSC22D4-205ENST00000493217 A0A1B0GU69 56 aa10.18□□□□□ -0.78
TSC22D4-205ENST00000493217 TNXBP22105 4242 aa10.18□□□□□ -0.78
TSC22D4-205ENST00000493217 PMAIP1Q13794 54 aa10.18□□□□□ -0.78
TSC22D4-205ENST00000493217 SPTSSBQ8NFR3 76 aa10.18□□□□□ -0.78
TSC22D4-205ENST00000493217 HSPG2P98160 4391 aa10.17□□□□□ -0.78
TSC22D4-205ENST00000493217 LRP1Q07954 4544 aaKnown RBP10.16□□□□□ -0.78
TSC22D4-205ENST00000493217 KRTAP10-8P60410 259 aa10.13□□□□□ -0.79
TSC22D4-205ENST00000493217 FAT3Q8TDW7 4589 aa10.12□□□□□ -0.79
TSC22D4-205ENST00000493217 Q5VSD8 79 aa10.11□□□□□ -0.79
TSC22D4-205ENST00000493217 RYR3Q15413 4870 aa10.09□□□□□ -0.79
TSC22D4-205ENST00000493217 KRTAP3-1Q9BYR8 98 aa10.06□□□□□ -0.8
TSC22D4-205ENST00000493217 A6NN06 94 aa10.03□□□□□ -0.8
TSC22D4-205ENST00000493217 RYR1P21817 5038 aa10.03□□□□□ -0.8
TSC22D4-205ENST00000493217 SEC61GP60059 68 aa10.01□□□□□ -0.81
TSC22D4-205ENST00000493217 SPATA8Q6RVD6 105 aa9.99□□□□□ -0.81
TSC22D4-205ENST00000493217 UQCR11O14957 56 aa9.98□□□□□ -0.81
TSC22D4-205ENST00000493217 KRTAP17-1Q9BYP8 105 aa9.98□□□□□ -0.81
TSC22D4-205ENST00000493217 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
TSC22D4-205ENST00000493217 MIR22HGQ0VDD5 57 aa9.93□□□□□ -0.82
TSC22D4-205ENST00000493217 KTN1-AS1Q86SY8 53 aa9.92□□□□□ -0.82
TSC22D4-205ENST00000493217 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
TSC22D4-205ENST00000493217 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.83
TSC22D4-205ENST00000493217 RPL37P61927 97 aaKnown RBP9.88□□□□□ -0.83
TSC22D4-205ENST00000493217 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms