RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 C8orf87E5RJ46 101 aa13.86□□□□□ -0.19
SH3GL3-204ENST00000492099 A0A1B0GVX0 72 aa13.85□□□□□ -0.19
SH3GL3-204ENST00000492099 JMJD7-PLA2G4BH0Y9G9 81 aa13.85□□□□□ -0.19
SH3GL3-204ENST00000492099 J3KT08 172 aa13.84□□□□□ -0.19
SH3GL3-204ENST00000492099 Q6ZQT0 140 aa13.83□□□□□ -0.2
SH3GL3-204ENST00000492099 FSIP2Q5CZC0 6907 aa13.81□□□□□ -0.2
SH3GL3-204ENST00000492099 LYRM7Q5U5X0 104 aa13.79□□□□□ -0.2
SH3GL3-204ENST00000492099 A0A1B0GW54 56 aa13.78□□□□□ -0.2
SH3GL3-204ENST00000492099 CRCT1Q9UGL9 99 aa13.78□□□□□ -0.2
SH3GL3-204ENST00000492099 LOC110117498A0A087WWA1 95 aa13.77□□□□□ -0.21
SH3GL3-204ENST00000492099 PDE6GP18545 87 aa13.77□□□□□ -0.21
SH3GL3-204ENST00000492099 NDUFB1O75438 58 aa13.73□□□□□ -0.21
SH3GL3-204ENST00000492099 BATFQ16520 125 aa13.69□□□□□ -0.22
SH3GL3-204ENST00000492099 C14orf132Q9NPU4 83 aa13.68□□□□□ -0.22
SH3GL3-204ENST00000492099 RBM12B-AS1Q9P1G2 102 aa13.68□□□□□ -0.22
SH3GL3-204ENST00000492099 FAM236DA0A1B0GTK5 79 aa13.67□□□□□ -0.22
SH3GL3-204ENST00000492099 FAM236CP0DP71 79 aa13.67□□□□□ -0.22
SH3GL3-204ENST00000492099 HRES1P13985 223 aa13.65□□□□□ -0.22
SH3GL3-204ENST00000492099 MPLKIPQ8TAP9 179 aa13.65□□□□□ -0.22
SH3GL3-204ENST00000492099 A8MWP4 228 aa13.64□□□□□ -0.23
SH3GL3-204ENST00000492099 ZCCHC13Q8WW36 166 aaKnown RBP13.63□□□□□ -0.23
SH3GL3-204ENST00000492099 Q8N9P0 234 aaPredicted RBP13.61□□□□□ -0.23
SH3GL3-204ENST00000492099 TAX1BP3O14907 124 aa13.6□□□□□ -0.23
SH3GL3-204ENST00000492099 C8orf17Q9NRJ1 99 aa13.59□□□□□ -0.23
SH3GL3-204ENST00000492099 IGKV3D-7A0A0C4DH55 119 aa13.57□□□□□ -0.24
SH3GL3-204ENST00000492099 C9orf118A6NHY6 69 aa13.57□□□□□ -0.24
SH3GL3-204ENST00000492099 NREPQ16612 68 aa13.57□□□□□ -0.24
SH3GL3-204ENST00000492099 KRTAP9-8Q9BYQ0 159 aa13.54□□□□□ -0.24
SH3GL3-204ENST00000492099 H3BT86 120 aa13.53□□□□□ -0.24
SH3GL3-204ENST00000492099 A0A1W2PPM0 123 aa13.51□□□□□ -0.25
SH3GL3-204ENST00000492099 SPINK7P58062 85 aa13.51□□□□□ -0.25
SH3GL3-204ENST00000492099 PRR15Q8IV56 129 aa13.51□□□□□ -0.25
SH3GL3-204ENST00000492099 MTURNQ8N3F0 131 aa13.51□□□□□ -0.25
SH3GL3-204ENST00000492099 Q6ZVQ6 151 aa13.49□□□□□ -0.25
SH3GL3-204ENST00000492099 COL5A1-AS1Q5SY13 56 aa13.39□□□□□ -0.27
SH3GL3-204ENST00000492099 MMP24-AS1A0A0U1RRL7 71 aa13.38□□□□□ -0.27
SH3GL3-204ENST00000492099 TMEM254Q8TBM7 123 aa13.38□□□□□ -0.27
SH3GL3-204ENST00000492099 MRPL34Q9BQ48 92 aaKnown RBP13.38□□□□□ -0.27
SH3GL3-204ENST00000492099 K7EQZ3 153 aa13.34□□□□□ -0.27
SH3GL3-204ENST00000492099 MT2AP02795 61 aa13.34□□□□□ -0.27
SH3GL3-204ENST00000492099 hDV103S1A0JD37 113 aa13.33□□□□□ -0.28
SH3GL3-204ENST00000492099 SPCS1Q9Y6A9 102 aa13.32□□□□□ -0.28
SH3GL3-204ENST00000492099 BPY2O14599 106 aa13.31□□□□□ -0.28
SH3GL3-204ENST00000492099 WFDC13Q8IUB5 93 aa13.3□□□□□ -0.28
SH3GL3-204ENST00000492099 PCP4L1A6NKN8 68 aa13.28□□□□□ -0.28
SH3GL3-204ENST00000492099 NDUFS5O43920 106 aa13.25□□□□□ -0.29
SH3GL3-204ENST00000492099 MT1FP04733 61 aa13.23□□□□□ -0.29
SH3GL3-204ENST00000492099 K7EP34 96 aa13.21□□□□□ -0.29
SH3GL3-204ENST00000492099 KRTAP10-10P60014 251 aa13.21□□□□□ -0.29
SH3GL3-204ENST00000492099 SMCPP49901 116 aaPredicted RBP13.2□□□□□ -0.3
SH3GL3-204ENST00000492099 PRO0461Q9UI25 63 aa13.19□□□□□ -0.3
SH3GL3-204ENST00000492099 USH2AO75445 5202 aa13.16□□□□□ -0.3
SH3GL3-204ENST00000492099 Q8N9L7 120 aa13.12□□□□□ -0.31
SH3GL3-204ENST00000492099 KRTAP9-3Q9BYQ3 159 aa13.12□□□□□ -0.31
SH3GL3-204ENST00000492099 CASC2Q6XLA1 102 aa13.11□□□□□ -0.31
SH3GL3-204ENST00000492099 UBL5Q9BZL1 73 aa13.08□□□□□ -0.32
SH3GL3-204ENST00000492099 Q5W150 140 aa13.07□□□□□ -0.32
SH3GL3-204ENST00000492099 IGKV2D-30A0A075B6S6 120 aa13.06□□□□□ -0.32
SH3GL3-204ENST00000492099 IGKV2-30P06310 120 aa13.06□□□□□ -0.32
SH3GL3-204ENST00000492099 H1FX-AS1Q4G0G2 97 aa13.05□□□□□ -0.32
SH3GL3-204ENST00000492099 C7orf65Q6ZTY9 151 aa13.05□□□□□ -0.32
SH3GL3-204ENST00000492099 LINC00846Q9NV44 126 aa13.05□□□□□ -0.32
SH3GL3-204ENST00000492099 HCG22E2RYF7 251 aa13.04□□□□□ -0.32
SH3GL3-204ENST00000492099 LCE2BO14633 110 aa13.04□□□□□ -0.32
SH3GL3-204ENST00000492099 SSPOA2VEC9 5147 aa13.04□□□□□ -0.32
SH3GL3-204ENST00000492099 GTF2H5Q6ZYL4 71 aa13.02□□□□□ -0.33
SH3GL3-204ENST00000492099 CXCL6P80162 114 aa12.99□□□□□ -0.33
SH3GL3-204ENST00000492099 F8W1H4 67 aa12.91□□□□□ -0.34
SH3GL3-204ENST00000492099 C4orf26Q17RF5 130 aa12.83□□□□□ -0.36
SH3GL3-204ENST00000492099 KRTAP19-1Q8IUB9 90 aa12.83□□□□□ -0.36
SH3GL3-204ENST00000492099 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.82□□□□□ -0.36
SH3GL3-204ENST00000492099 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
SH3GL3-204ENST00000492099 FCGBPQ9Y6R7 5405 aaPredicted RBP12.76□□□□□ -0.37
SH3GL3-204ENST00000492099 TP53AIP1Q9HCN2 124 aa12.75□□□□□ -0.37
SH3GL3-204ENST00000492099 KRTAP9-7A8MTY7 169 aa12.67□□□□□ -0.38
SH3GL3-204ENST00000492099 A0A1B0GV90 55 aa12.65□□□□□ -0.38
SH3GL3-204ENST00000492099 KRTAP3-1Q9BYR8 98 aa12.63□□□□□ -0.39
SH3GL3-204ENST00000492099 KRTAP19-6Q3LI70 58 aa12.62□□□□□ -0.39
SH3GL3-204ENST00000492099 C1orf64Q8NEQ6 169 aa12.61□□□□□ -0.39
SH3GL3-204ENST00000492099 C5orf47Q569G3 176 aa12.58□□□□□ -0.4
SH3GL3-204ENST00000492099 ACYP1P07311 99 aa12.57□□□□□ -0.4
SH3GL3-204ENST00000492099 S4R3F8 94 aa12.57□□□□□ -0.4
SH3GL3-204ENST00000492099 FAM240AA0A1B0GVK7 77 aa12.56□□□□□ -0.4
SH3GL3-204ENST00000492099 CSAG1Q6PB30 78 aa12.5□□□□□ -0.41
SH3GL3-204ENST00000492099 LCA10Q71F78 164 aa12.47□□□□□ -0.41
SH3GL3-204ENST00000492099 CYP4F30PQ9H0H9 118 aa12.47□□□□□ -0.41
SH3GL3-204ENST00000492099 ATP5EP2Q5VTU8 51 aa12.46□□□□□ -0.41
SH3GL3-204ENST00000492099 FAM236AA0A1B0GUQ0 79 aa12.45□□□□□ -0.42
SH3GL3-204ENST00000492099 FAM236BA0A1B0GV22 79 aa12.45□□□□□ -0.42
SH3GL3-204ENST00000492099 TRAV22A0A0B4J277 110 aa12.44□□□□□ -0.42
SH3GL3-204ENST00000492099 MACF1Q9UPN3 7388 aaKnown RBP12.4□□□□□ -0.42
SH3GL3-204ENST00000492099 LOC101927531A0A1B0GV80 90 aa12.4□□□□□ -0.42
SH3GL3-204ENST00000492099 HIST1H4AP62805 103 aaKnown RBP12.38□□□□□ -0.43
SH3GL3-204ENST00000492099 UQCRQO14949 82 aa12.32□□□□□ -0.44
SH3GL3-204ENST00000492099 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
SH3GL3-204ENST00000492099 ATOX1O00244 68 aa12.27□□□□□ -0.45
SH3GL3-204ENST00000492099 SYNE2Q8WXH0 6885 aaKnown RBP12.25□□□□□ -0.45
SH3GL3-204ENST00000492099 LINC00643Q86TS7 51 aa12.24□□□□□ -0.45
SH3GL3-204ENST00000492099 H0Y9P7 68 aa12.23□□□□□ -0.45
SH3GL3-204ENST00000492099 SPRR2GQ9BYE4 73 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms