RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
TOM1-215ENST00000491987 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
TOM1-215ENST00000491987 Q6ZQT0 140 aa7.58□□□□□ -1.2
TOM1-215ENST00000491987 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
TOM1-215ENST00000491987 JMJD7-PLA2G4BH0Y9G9 81 aa7.57□□□□□ -1.2
TOM1-215ENST00000491987 J3KT08 172 aa7.57□□□□□ -1.2
TOM1-215ENST00000491987 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
TOM1-215ENST00000491987 HRES1P13985 223 aa7.55□□□□□ -1.2
TOM1-215ENST00000491987 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
TOM1-215ENST00000491987 RBM12B-AS1Q9P1G2 102 aa7.53□□□□□ -1.2
TOM1-215ENST00000491987 NDUFB1O75438 58 aa7.52□□□□□ -1.21
TOM1-215ENST00000491987 BATFQ16520 125 aa7.52□□□□□ -1.21
TOM1-215ENST00000491987 MPLKIPQ8TAP9 179 aa7.52□□□□□ -1.21
TOM1-215ENST00000491987 C14orf132Q9NPU4 83 aa7.52□□□□□ -1.21
TOM1-215ENST00000491987 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
TOM1-215ENST00000491987 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
TOM1-215ENST00000491987 TSTD3H0UI37 97 aa7.5□□□□□ -1.21
TOM1-215ENST00000491987 PDE6GP18545 87 aa7.5□□□□□ -1.21
TOM1-215ENST00000491987 ZCCHC13Q8WW36 166 aaKnown RBP7.5□□□□□ -1.21
TOM1-215ENST00000491987 A0A1B0GW54 56 aa7.49□□□□□ -1.21
TOM1-215ENST00000491987 A8MWP4 228 aa7.48□□□□□ -1.21
TOM1-215ENST00000491987 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
TOM1-215ENST00000491987 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
TOM1-215ENST00000491987 IGKV3D-7A0A0C4DH55 119 aa7.46□□□□□ -1.22
TOM1-215ENST00000491987 SPINK7P58062 85 aa7.44□□□□□ -1.22
TOM1-215ENST00000491987 NREPQ16612 68 aa7.43□□□□□ -1.22
TOM1-215ENST00000491987 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
TOM1-215ENST00000491987 MT2AP02795 61 aa7.41□□□□□ -1.22
TOM1-215ENST00000491987 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
TOM1-215ENST00000491987 MTURNQ8N3F0 131 aa7.41□□□□□ -1.22
TOM1-215ENST00000491987 Q6ZVQ6 151 aa7.4□□□□□ -1.22
TOM1-215ENST00000491987 A0A1W2PPM0 123 aa7.39□□□□□ -1.23
TOM1-215ENST00000491987 H3BT86 120 aa7.39□□□□□ -1.23
TOM1-215ENST00000491987 TAX1BP3O14907 124 aa7.39□□□□□ -1.23
TOM1-215ENST00000491987 LOC105371267A0A1B0GV96 52 aa7.38□□□□□ -1.23
TOM1-215ENST00000491987 MMP24-AS1A0A0U1RRL7 71 aa7.37□□□□□ -1.23
TOM1-215ENST00000491987 MT1FP04733 61 aa7.36□□□□□ -1.23
TOM1-215ENST00000491987 WFDC13Q8IUB5 93 aa7.36□□□□□ -1.23
TOM1-215ENST00000491987 K7EQZ3 153 aa7.35□□□□□ -1.23
TOM1-215ENST00000491987 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
TOM1-215ENST00000491987 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
TOM1-215ENST00000491987 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
TOM1-215ENST00000491987 USH2AO75445 5202 aa7.31□□□□□ -1.24
TOM1-215ENST00000491987 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
TOM1-215ENST00000491987 NDUFS5O43920 106 aa7.3□□□□□ -1.24
TOM1-215ENST00000491987 BPY2O14599 106 aa7.29□□□□□ -1.24
TOM1-215ENST00000491987 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
TOM1-215ENST00000491987 SSPOA2VEC9 5147 aa7.27□□□□□ -1.24
TOM1-215ENST00000491987 LCE2BO14633 110 aa7.26□□□□□ -1.25
TOM1-215ENST00000491987 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
TOM1-215ENST00000491987 Q8N9L7 120 aa7.25□□□□□ -1.25
TOM1-215ENST00000491987 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
TOM1-215ENST00000491987 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
TOM1-215ENST00000491987 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
TOM1-215ENST00000491987 Q5W150 140 aa7.2□□□□□ -1.26
TOM1-215ENST00000491987 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
TOM1-215ENST00000491987 COL5A1-AS1Q5SY13 56 aa7.19□□□□□ -1.26
TOM1-215ENST00000491987 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
TOM1-215ENST00000491987 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
TOM1-215ENST00000491987 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
TOM1-215ENST00000491987 PRO0461Q9UI25 63 aa7.17□□□□□ -1.26
TOM1-215ENST00000491987 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.16□□□□□ -1.26
TOM1-215ENST00000491987 LINC00846Q9NV44 126 aa7.16□□□□□ -1.26
TOM1-215ENST00000491987 K7EP34 96 aa7.15□□□□□ -1.26
TOM1-215ENST00000491987 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
TOM1-215ENST00000491987 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
TOM1-215ENST00000491987 CXCL6P80162 114 aa7.11□□□□□ -1.27
TOM1-215ENST00000491987 FCGBPQ9Y6R7 5405 aaPredicted RBP7.1□□□□□ -1.27
TOM1-215ENST00000491987 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
TOM1-215ENST00000491987 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
TOM1-215ENST00000491987 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
TOM1-215ENST00000491987 PCP4L1A6NKN8 68 aa7□□□□□ -1.29
TOM1-215ENST00000491987 KRTAP19-6Q3LI70 58 aa7□□□□□ -1.29
TOM1-215ENST00000491987 F8W1H4 67 aa6.99□□□□□ -1.29
TOM1-215ENST00000491987 ETDBQ3ZM63 59 aa6.99□□□□□ -1.29
TOM1-215ENST00000491987 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
TOM1-215ENST00000491987 C5orf47Q569G3 176 aa6.96□□□□□ -1.3
TOM1-215ENST00000491987 TP53AIP1Q9HCN2 124 aa6.96□□□□□ -1.3
TOM1-215ENST00000491987 C1orf64Q8NEQ6 169 aa6.94□□□□□ -1.3
TOM1-215ENST00000491987 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
TOM1-215ENST00000491987 S4R3F8 94 aa6.93□□□□□ -1.3
TOM1-215ENST00000491987 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
TOM1-215ENST00000491987 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
TOM1-215ENST00000491987 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
TOM1-215ENST00000491987 LCA10Q71F78 164 aa6.88□□□□□ -1.31
TOM1-215ENST00000491987 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
TOM1-215ENST00000491987 ACYP1P07311 99 aa6.83□□□□□ -1.32
TOM1-215ENST00000491987 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
TOM1-215ENST00000491987 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
TOM1-215ENST00000491987 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
TOM1-215ENST00000491987 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
TOM1-215ENST00000491987 FAM240AA0A1B0GVK7 77 aa6.78□□□□□ -1.32
TOM1-215ENST00000491987 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
TOM1-215ENST00000491987 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
TOM1-215ENST00000491987 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
TOM1-215ENST00000491987 A0A087WVE0 104 aa6.75□□□□□ -1.33
TOM1-215ENST00000491987 MT1BP07438 61 aa6.74□□□□□ -1.33
TOM1-215ENST00000491987 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
TOM1-215ENST00000491987 UQCRQO14949 82 aa6.73□□□□□ -1.33
TOM1-215ENST00000491987 Q5VV11 94 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms