RNA–Protein interactions for RNA: ENST00000491328.1

BCKDHB-206, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

TSL 2

Gene BCKDHB, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-206ENST00000491328 DCHS2Q6V1P9 2916 aa0.12□□□□□ -2.39
BCKDHB-206ENST00000491328 KAAG1Q9UBP8 84 aa0.12□□□□□ -2.39
BCKDHB-206ENST00000491328 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
BCKDHB-206ENST00000491328 CREBBPQ92793 2442 aa0.11□□□□□ -2.39
BCKDHB-206ENST00000491328 SNRPGP15A8MWD9 76 aa0.11□□□□□ -2.39
BCKDHB-206ENST00000491328 NRXN3Q9Y4C0 1643 aa0.1□□□□□ -2.39
BCKDHB-206ENST00000491328 FLNCQ14315 2725 aa0.09□□□□□ -2.39
BCKDHB-206ENST00000491328 LYSTQ99698 3801 aa0.09□□□□□ -2.4
BCKDHB-206ENST00000491328 SPTBN4Q9H254 2564 aa0.08□□□□□ -2.4
BCKDHB-206ENST00000491328 LMO7Q8WWI1 1683 aa0.08□□□□□ -2.4
BCKDHB-206ENST00000491328 WFDC10BQ8IUB3 73 aa0.08□□□□□ -2.4
BCKDHB-206ENST00000491328 PRRC2CQ9Y520 2896 aaKnown RBP0.07□□□□□ -2.4
BCKDHB-206ENST00000491328 PKD1L2Q7Z442 2459 aa0.06□□□□□ -2.4
BCKDHB-206ENST00000491328 LRP2P98164 4655 aa0.05□□□□□ -2.4
BCKDHB-206ENST00000491328 COL6A3P12111 3177 aa0.04□□□□□ -2.4
BCKDHB-206ENST00000491328 SPRR2EP22531 72 aa0.04□□□□□ -2.4
BCKDHB-206ENST00000491328 KIF21BO75037 1637 aa0.04□□□□□ -2.4
BCKDHB-206ENST00000491328 SONP18583 2426 aaKnown RBP0.04□□□□□ -2.4
BCKDHB-206ENST00000491328 CEP290O15078 2479 aa0.04□□□□□ -2.4
BCKDHB-206ENST00000491328 MMP24-AS1A0A0U1RRL7 71 aa0.03□□□□□ -2.4
BCKDHB-206ENST00000491328 TFF3Q07654 80 aa0.03□□□□□ -2.4
BCKDHB-206ENST00000491328 DEFB110Q30KQ9 67 aa0.03□□□□□ -2.4
BCKDHB-206ENST00000491328 FAM208AQ9UK61 1670 aaKnown RBP0□□□□□ -2.41
BCKDHB-206ENST00000491328 MT1AP04731 61 aa-0.01□□□□□ -2.41
BCKDHB-206ENST00000491328 SVEP1Q4LDE5 3571 aa-0.01□□□□□ -2.41
BCKDHB-206ENST00000491328 PKD1P98161 4303 aa-0.01□□□□□ -2.41
BCKDHB-206ENST00000491328 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
BCKDHB-206ENST00000491328 DDX60Q8IY21 1712 aaKnown RBP-0.01□□□□□ -2.41
BCKDHB-206ENST00000491328 LINC01546A6NGU7 62 aa-0.03□□□□□ -2.41
BCKDHB-206ENST00000491328 M0QY20 66 aa-0.03□□□□□ -2.41
BCKDHB-206ENST00000491328 IQGAP1P46940 1657 aa-0.03□□□□□ -2.41
BCKDHB-206ENST00000491328 SETD2Q9BYW2 2564 aaPredicted RBP-0.03□□□□□ -2.41
BCKDHB-206ENST00000491328 PKHD1P08F94 4074 aa-0.04□□□□□ -2.42
BCKDHB-206ENST00000491328 STAB1Q9NY15 2570 aa-0.04□□□□□ -2.42
BCKDHB-206ENST00000491328 SMIM2Q9BVW6 85 aa-0.05□□□□□ -2.42
BCKDHB-206ENST00000491328 ZANQ9Y493 2812 aa-0.06□□□□□ -2.42
BCKDHB-206ENST00000491328 TNP1P09430 55 aa-0.07□□□□□ -2.42
BCKDHB-206ENST00000491328 CUBNO60494 3623 aa-0.08□□□□□ -2.42
BCKDHB-206ENST00000491328 NF1P21359 2839 aa-0.08□□□□□ -2.42
BCKDHB-206ENST00000491328 GPR98Q8WXG9 6306 aa-0.08□□□□□ -2.42
BCKDHB-206ENST00000491328 SPRR2FQ96RM1 72 aa-0.09□□□□□ -2.42
BCKDHB-206ENST00000491328 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
BCKDHB-206ENST00000491328 SPG11Q96JI7 2443 aa-0.09□□□□□ -2.42
BCKDHB-206ENST00000491328 VPS13BQ7Z7G8 4022 aa-0.1□□□□□ -2.42
BCKDHB-206ENST00000491328 MTORP42345 2549 aa-0.11□□□□□ -2.43
BCKDHB-206ENST00000491328 A8MTW9 85 aa-0.11□□□□□ -2.43
BCKDHB-206ENST00000491328 FLGP20930 4061 aaPredicted RBP-0.11□□□□□ -2.43
BCKDHB-206ENST00000491328 PKHD1L1Q86WI1 4243 aa-0.12□□□□□ -2.43
BCKDHB-206ENST00000491328 SYNE2Q8WXH0 6885 aaKnown RBP-0.14□□□□□ -2.43
BCKDHB-206ENST00000491328 M0QZ58 72 aa-0.14□□□□□ -2.43
BCKDHB-206ENST00000491328 DEFB131AP59861 70 aa-0.14□□□□□ -2.43
BCKDHB-206ENST00000491328 DMXL1Q9Y485 3027 aa-0.15□□□□□ -2.43
BCKDHB-206ENST00000491328 ANK3Q12955 4377 aaKnown RBP-0.15□□□□□ -2.43
BCKDHB-206ENST00000491328 ZZEF1O43149 2961 aa-0.16□□□□□ -2.43
BCKDHB-206ENST00000491328 NFAT5O94916 1531 aa-0.16□□□□□ -2.43
BCKDHB-206ENST00000491328 SSPOA2VEC9 5147 aa-0.16□□□□□ -2.43
BCKDHB-206ENST00000491328 GCN1Q92616 2671 aaKnown RBP-0.16□□□□□ -2.44
BCKDHB-206ENST00000491328 KRTAP19-7Q3SYF9 63 aa-0.17□□□□□ -2.44
BCKDHB-206ENST00000491328 DNAH9Q9NYC9 4486 aa-0.18□□□□□ -2.44
BCKDHB-206ENST00000491328 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
BCKDHB-206ENST00000491328 SACSQ9NZJ4 4579 aa-0.19□□□□□ -2.44
BCKDHB-206ENST00000491328 TOMM5Q8N4H5 51 aa-0.19□□□□□ -2.44
BCKDHB-206ENST00000491328 PDZD2O15018 2839 aa-0.2□□□□□ -2.44
BCKDHB-206ENST00000491328 IQGAP2Q13576 1575 aa-0.21□□□□□ -2.44
BCKDHB-206ENST00000491328 FSIP2Q5CZC0 6907 aa-0.21□□□□□ -2.44
BCKDHB-206ENST00000491328 DNAH3Q8TD57 4116 aa-0.23□□□□□ -2.45
BCKDHB-206ENST00000491328 FAT3Q8TDW7 4589 aa-0.23□□□□□ -2.45
BCKDHB-206ENST00000491328 MAP1AP78559 2803 aaPredicted RBP-0.24□□□□□ -2.45
BCKDHB-206ENST00000491328 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.24□□□□□ -2.45
BCKDHB-206ENST00000491328 TRPM2O94759 1503 aa-0.24□□□□□ -2.45
BCKDHB-206ENST00000491328 SRRM2Q9UQ35 2752 aaKnown RBP-0.25□□□□□ -2.45
BCKDHB-206ENST00000491328 CLPSL2Q6UWE3 100 aa-0.25□□□□□ -2.45
BCKDHB-206ENST00000491328 CLTCL1P53675 1640 aa-0.26□□□□□ -2.45
BCKDHB-206ENST00000491328 NDUFA1O15239 70 aa-0.26□□□□□ -2.45
BCKDHB-206ENST00000491328 TGP01266 2768 aa-0.27□□□□□ -2.45
BCKDHB-206ENST00000491328 FAM186AA6NE01 2351 aa-0.27□□□□□ -2.45
BCKDHB-206ENST00000491328 NBEAL1Q6ZS30 2694 aa-0.27□□□□□ -2.45
BCKDHB-206ENST00000491328 FASNP49327 2511 aaKnown RBP-0.27□□□□□ -2.45
BCKDHB-206ENST00000491328 LRRK2Q5S007 2527 aa-0.27□□□□□ -2.45
BCKDHB-206ENST00000491328 ACACAQ13085 2346 aa-0.27□□□□□ -2.45
BCKDHB-206ENST00000491328 MUC2Q02817 5179 aa-0.28□□□□□ -2.45
BCKDHB-206ENST00000491328 ANKRD11Q6UB99 2663 aaPredicted RBP-0.28□□□□□ -2.45
BCKDHB-206ENST00000491328 STAB2Q8WWQ8 2551 aa-0.28□□□□□ -2.45
BCKDHB-206ENST00000491328 ACACBO00763 2458 aa-0.29□□□□□ -2.46
BCKDHB-206ENST00000491328 TACC2O95359 2948 aa-0.3□□□□□ -2.46
BCKDHB-206ENST00000491328 APOBP04114 4563 aaKnown RBP-0.3□□□□□ -2.46
BCKDHB-206ENST00000491328 TEP1Q99973 2627 aaKnown RBP-0.32□□□□□ -2.46
BCKDHB-206ENST00000491328 MACF1Q9UPN3 7388 aaKnown RBP-0.32□□□□□ -2.46
BCKDHB-206ENST00000491328 EPG5Q9HCE0 2579 aa-0.32□□□□□ -2.46
BCKDHB-206ENST00000491328 DNAH2Q9P225 4427 aa-0.32□□□□□ -2.46
BCKDHB-206ENST00000491328 AKAP9Q99996 3911 aa-0.32□□□□□ -2.46
BCKDHB-206ENST00000491328 KRTAP19-8Q3LI54 63 aa-0.33□□□□□ -2.46
BCKDHB-206ENST00000491328 HTTP42858 3142 aa-0.33□□□□□ -2.46
BCKDHB-206ENST00000491328 POLR2KP53803 58 aaKnown RBP-0.34□□□□□ -2.46
BCKDHB-206ENST00000491328 KRTAP8-1Q8IUC2 63 aa-0.34□□□□□ -2.46
BCKDHB-206ENST00000491328 HIVEP1P15822 2718 aa-0.34□□□□□ -2.46
BCKDHB-206ENST00000491328 NBEAL2Q6ZNJ1 2754 aa-0.35□□□□□ -2.47
BCKDHB-206ENST00000491328 KRTAP19-5Q3LI72 72 aa-0.35□□□□□ -2.47
BCKDHB-206ENST00000491328 LAMA5O15230 3695 aa-0.36□□□□□ -2.47
BCKDHB-206ENST00000491328 DNAH6Q9C0G6 4158 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms