RNA–Protein interactions for RNA: ENST00000491328.1

BCKDHB-206, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

TSL 2

Gene BCKDHB, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-206ENST00000491328 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
BCKDHB-206ENST00000491328 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
BCKDHB-206ENST00000491328 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
BCKDHB-206ENST00000491328 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
BCKDHB-206ENST00000491328 FOXD1Q16676 465 aa21.41■■□□□ 1.02
BCKDHB-206ENST00000491328 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
BCKDHB-206ENST00000491328 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
BCKDHB-206ENST00000491328 ADRA2BP18089 450 aa20.23■□□□□ 0.83
BCKDHB-206ENST00000491328 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
BCKDHB-206ENST00000491328 MSH5O43196 834 aa19.88■□□□□ 0.77
BCKDHB-206ENST00000491328 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
BCKDHB-206ENST00000491328 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
BCKDHB-206ENST00000491328 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
BCKDHB-206ENST00000491328 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
BCKDHB-206ENST00000491328 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
BCKDHB-206ENST00000491328 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
BCKDHB-206ENST00000491328 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
BCKDHB-206ENST00000491328 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
BCKDHB-206ENST00000491328 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
BCKDHB-206ENST00000491328 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
BCKDHB-206ENST00000491328 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
BCKDHB-206ENST00000491328 KCNA4P22459 653 aa17.41■□□□□ 0.38
BCKDHB-206ENST00000491328 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
BCKDHB-206ENST00000491328 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
BCKDHB-206ENST00000491328 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
BCKDHB-206ENST00000491328 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
BCKDHB-206ENST00000491328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
BCKDHB-206ENST00000491328 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
BCKDHB-206ENST00000491328 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
BCKDHB-206ENST00000491328 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
BCKDHB-206ENST00000491328 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
BCKDHB-206ENST00000491328 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
BCKDHB-206ENST00000491328 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
BCKDHB-206ENST00000491328 CAPN15O75808 1086 aa16.22■□□□□ 0.19
BCKDHB-206ENST00000491328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
BCKDHB-206ENST00000491328 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
BCKDHB-206ENST00000491328 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
BCKDHB-206ENST00000491328 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
BCKDHB-206ENST00000491328 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
BCKDHB-206ENST00000491328 APLP2Q06481 763 aa16.1■□□□□ 0.17
BCKDHB-206ENST00000491328 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
BCKDHB-206ENST00000491328 DSG3P32926 999 aa16.04■□□□□ 0.16
BCKDHB-206ENST00000491328 ZBTB22O15209 634 aa16.02■□□□□ 0.16
BCKDHB-206ENST00000491328 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
BCKDHB-206ENST00000491328 ABCB7O75027 752 aa15.89■□□□□ 0.13
BCKDHB-206ENST00000491328 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
BCKDHB-206ENST00000491328 POLA2Q14181 598 aa15.68■□□□□ 0.1
BCKDHB-206ENST00000491328 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
BCKDHB-206ENST00000491328 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
BCKDHB-206ENST00000491328 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
BCKDHB-206ENST00000491328 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
BCKDHB-206ENST00000491328 FBLN2P98095 1184 aa15.11■□□□□ 0.01
BCKDHB-206ENST00000491328 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
BCKDHB-206ENST00000491328 AKT1S1Q96B36 256 aa15□□□□□ -0.01
BCKDHB-206ENST00000491328 AMER1Q5JTC6 1135 aaPredicted RBP14.95□□□□□ -0.02
BCKDHB-206ENST00000491328 RTN4Q9NQC3 1192 aaKnown RBP14.91□□□□□ -0.02
BCKDHB-206ENST00000491328 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
BCKDHB-206ENST00000491328 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
BCKDHB-206ENST00000491328 FKBP8Q14318 412 aa14.9□□□□□ -0.02
BCKDHB-206ENST00000491328 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
BCKDHB-206ENST00000491328 POTEHQ6S545 545 aa14.9□□□□□ -0.02
BCKDHB-206ENST00000491328 REM2Q8IYK8 340 aaPredicted RBP14.88□□□□□ -0.03
BCKDHB-206ENST00000491328 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
BCKDHB-206ENST00000491328 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
BCKDHB-206ENST00000491328 SLC24A1O60721 1099 aa14.77□□□□□ -0.05
BCKDHB-206ENST00000491328 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
BCKDHB-206ENST00000491328 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
BCKDHB-206ENST00000491328 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
BCKDHB-206ENST00000491328 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
BCKDHB-206ENST00000491328 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
BCKDHB-206ENST00000491328 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
BCKDHB-206ENST00000491328 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
BCKDHB-206ENST00000491328 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
BCKDHB-206ENST00000491328 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
BCKDHB-206ENST00000491328 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
BCKDHB-206ENST00000491328 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
BCKDHB-206ENST00000491328 HAX1O00165 279 aa14.24□□□□□ -0.13
BCKDHB-206ENST00000491328 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
BCKDHB-206ENST00000491328 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
BCKDHB-206ENST00000491328 PROM2Q8N271 834 aa14.15□□□□□ -0.14
BCKDHB-206ENST00000491328 EVX2Q03828 476 aa14.1□□□□□ -0.15
BCKDHB-206ENST00000491328 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
BCKDHB-206ENST00000491328 CREBZFQ9NS37 354 aa14.06□□□□□ -0.16
BCKDHB-206ENST00000491328 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
BCKDHB-206ENST00000491328 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
BCKDHB-206ENST00000491328 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
BCKDHB-206ENST00000491328 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
BCKDHB-206ENST00000491328 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
BCKDHB-206ENST00000491328 MIER1Q8N108 512 aa13.81□□□□□ -0.2
BCKDHB-206ENST00000491328 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
BCKDHB-206ENST00000491328 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
BCKDHB-206ENST00000491328 GABBR2O75899 941 aa13.77□□□□□ -0.21
BCKDHB-206ENST00000491328 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
BCKDHB-206ENST00000491328 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
BCKDHB-206ENST00000491328 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
BCKDHB-206ENST00000491328 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
BCKDHB-206ENST00000491328 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
BCKDHB-206ENST00000491328 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
BCKDHB-206ENST00000491328 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
BCKDHB-206ENST00000491328 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms