RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 RBM3P98179 157 aaKnown RBP8.86□□□□□ -0.99
GGA1-223ENST00000491295 DSCR8Q96T75 97 aa8.85□□□□□ -0.99
GGA1-223ENST00000491295 USH2AO75445 5202 aa8.84□□□□□ -0.99
GGA1-223ENST00000491295 J3KT08 172 aa8.84□□□□□ -0.99
GGA1-223ENST00000491295 K7ERJ3 54 aa8.84□□□□□ -0.99
GGA1-223ENST00000491295 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
GGA1-223ENST00000491295 LCE2BO14633 110 aa8.82□□□□□ -1
GGA1-223ENST00000491295 ZCCHC13Q8WW36 166 aaKnown RBP8.82□□□□□ -1
GGA1-223ENST00000491295 VPS25Q9BRG1 176 aa8.82□□□□□ -1
GGA1-223ENST00000491295 SSPOA2VEC9 5147 aa8.8□□□□□ -1
GGA1-223ENST00000491295 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
GGA1-223ENST00000491295 SPINK7P58062 85 aa8.79□□□□□ -1
GGA1-223ENST00000491295 C9JAW5 83 aa8.78□□□□□ -1
GGA1-223ENST00000491295 PYY3Q5JQD4 70 aa8.78□□□□□ -1
GGA1-223ENST00000491295 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
GGA1-223ENST00000491295 NDUFB1O75438 58 aa8.77□□□□□ -1.01
GGA1-223ENST00000491295 Q8N9P0 234 aaPredicted RBP8.76□□□□□ -1.01
GGA1-223ENST00000491295 UQCR10Q9UDW1 63 aa8.76□□□□□ -1.01
GGA1-223ENST00000491295 BAALC-AS2P0C853 105 aa8.75□□□□□ -1.01
GGA1-223ENST00000491295 Q6ZQT0 140 aa8.75□□□□□ -1.01
GGA1-223ENST00000491295 A0A1B0GW54 56 aa8.74□□□□□ -1.01
GGA1-223ENST00000491295 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
GGA1-223ENST00000491295 FCGBPQ9Y6R7 5405 aaPredicted RBP8.71□□□□□ -1.01
GGA1-223ENST00000491295 A8MWP4 228 aa8.68□□□□□ -1.02
GGA1-223ENST00000491295 JMJD7-PLA2G4BH0Y9G9 81 aa8.68□□□□□ -1.02
GGA1-223ENST00000491295 LYRM7Q5U5X0 104 aa8.67□□□□□ -1.02
GGA1-223ENST00000491295 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
GGA1-223ENST00000491295 PDE6GP18545 87 aa8.65□□□□□ -1.02
GGA1-223ENST00000491295 LOC110117498A0A087WWA1 95 aa8.64□□□□□ -1.03
GGA1-223ENST00000491295 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
GGA1-223ENST00000491295 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
GGA1-223ENST00000491295 ATXN8Q156A1 80 aa8.61□□□□□ -1.03
GGA1-223ENST00000491295 Q6ZVQ6 151 aa8.61□□□□□ -1.03
GGA1-223ENST00000491295 KRTAP19-6Q3LI70 58 aa8.6□□□□□ -1.03
GGA1-223ENST00000491295 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
GGA1-223ENST00000491295 M0R143 59 aa8.54□□□□□ -1.04
GGA1-223ENST00000491295 NREPQ16612 68 aa8.54□□□□□ -1.04
GGA1-223ENST00000491295 TMEM254Q8TBM7 123 aa8.53□□□□□ -1.04
GGA1-223ENST00000491295 MRPL34Q9BQ48 92 aaKnown RBP8.53□□□□□ -1.04
GGA1-223ENST00000491295 MACF1Q9UPN3 7388 aaKnown RBP8.53□□□□□ -1.04
GGA1-223ENST00000491295 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
GGA1-223ENST00000491295 C14orf132Q9NPU4 83 aa8.51□□□□□ -1.05
GGA1-223ENST00000491295 MMP24-AS1A0A0U1RRL7 71 aa8.48□□□□□ -1.05
GGA1-223ENST00000491295 hDV103S1A0JD37 113 aa8.46□□□□□ -1.06
GGA1-223ENST00000491295 NAA38Q9BRA0 125 aaKnown RBP8.46□□□□□ -1.06
GGA1-223ENST00000491295 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.06
GGA1-223ENST00000491295 NDUFS5O43920 106 aa8.43□□□□□ -1.06
GGA1-223ENST00000491295 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
GGA1-223ENST00000491295 K7EQZ3 153 aa8.4□□□□□ -1.06
GGA1-223ENST00000491295 C7orf65Q6ZTY9 151 aa8.39□□□□□ -1.07
GGA1-223ENST00000491295 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
GGA1-223ENST00000491295 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
GGA1-223ENST00000491295 BPY2O14599 106 aa8.35□□□□□ -1.07
GGA1-223ENST00000491295 H3BT86 120 aa8.34□□□□□ -1.07
GGA1-223ENST00000491295 KRTAP6-3Q3LI67 103 aa8.34□□□□□ -1.07
GGA1-223ENST00000491295 Q5W150 140 aa8.33□□□□□ -1.08
GGA1-223ENST00000491295 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
GGA1-223ENST00000491295 SMIM6P0DI80 62 aa8.27□□□□□ -1.09
GGA1-223ENST00000491295 CXCL6P80162 114 aa8.26□□□□□ -1.09
GGA1-223ENST00000491295 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
GGA1-223ENST00000491295 HCG22E2RYF7 251 aa8.25□□□□□ -1.09
GGA1-223ENST00000491295 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
GGA1-223ENST00000491295 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
GGA1-223ENST00000491295 BATFQ16520 125 aa8.24□□□□□ -1.09
GGA1-223ENST00000491295 A0A1W2PPM0 123 aa8.21□□□□□ -1.1
GGA1-223ENST00000491295 Q8N9L7 120 aa8.2□□□□□ -1.1
GGA1-223ENST00000491295 FAM236AA0A1B0GUQ0 79 aa8.17□□□□□ -1.1
GGA1-223ENST00000491295 FAM236BA0A1B0GV22 79 aa8.17□□□□□ -1.1
GGA1-223ENST00000491295 C5orf47Q569G3 176 aa8.17□□□□□ -1.1
GGA1-223ENST00000491295 TAX1BP3O14907 124 aa8.16□□□□□ -1.1
GGA1-223ENST00000491295 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
GGA1-223ENST00000491295 S4R3F8 94 aa8.13□□□□□ -1.11
GGA1-223ENST00000491295 A6NN06 94 aa8.12□□□□□ -1.11
GGA1-223ENST00000491295 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
GGA1-223ENST00000491295 UBL5Q9BZL1 73 aa8.12□□□□□ -1.11
GGA1-223ENST00000491295 Q5VV11 94 aa8.11□□□□□ -1.11
GGA1-223ENST00000491295 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
GGA1-223ENST00000491295 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
GGA1-223ENST00000491295 MT1BP07438 61 aa8.08□□□□□ -1.12
GGA1-223ENST00000491295 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
GGA1-223ENST00000491295 SPCS1Q9Y6A9 102 aa8.07□□□□□ -1.12
GGA1-223ENST00000491295 LCA10Q71F78 164 aa8.06□□□□□ -1.12
GGA1-223ENST00000491295 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
GGA1-223ENST00000491295 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
GGA1-223ENST00000491295 KLKP1Q107X0 134 aa8□□□□□ -1.13
GGA1-223ENST00000491295 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
GGA1-223ENST00000491295 LOC105371267A0A1B0GV96 52 aa7.96□□□□□ -1.14
GGA1-223ENST00000491295 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
GGA1-223ENST00000491295 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
GGA1-223ENST00000491295 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
GGA1-223ENST00000491295 NEBP20929 6669 aa7.92□□□□□ -1.14
GGA1-223ENST00000491295 COL5A1-AS1Q5SY13 56 aa7.9□□□□□ -1.14
GGA1-223ENST00000491295 CYP4F30PQ9H0H9 118 aa7.89□□□□□ -1.15
GGA1-223ENST00000491295 K7EP34 96 aa7.88□□□□□ -1.15
GGA1-223ENST00000491295 KRTAP5-9P26371 169 aa7.86□□□□□ -1.15
GGA1-223ENST00000491295 IMUPQ9GZP8 106 aa7.84□□□□□ -1.15
GGA1-223ENST00000491295 MUC12Q9UKN1 5478 aa7.81□□□□□ -1.16
GGA1-223ENST00000491295 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
GGA1-223ENST00000491295 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
GGA1-223ENST00000491295 TRAV22A0A0B4J277 110 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms