RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
COL9A1-208ENST00000489611 FAM229BQ4G0N7 80 aa8.84□□□□□ -0.99
COL9A1-208ENST00000489611 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
COL9A1-208ENST00000489611 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
COL9A1-208ENST00000489611 FP248Q71RG6 208 aaPredicted RBP8.81□□□□□ -1
COL9A1-208ENST00000489611 MRPL34Q9BQ48 92 aaKnown RBP8.81□□□□□ -1
COL9A1-208ENST00000489611 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
COL9A1-208ENST00000489611 C4orf26Q17RF5 130 aa8.8□□□□□ -1
COL9A1-208ENST00000489611 A0A1B0GVY2 172 aa8.79□□□□□ -1
COL9A1-208ENST00000489611 C8orf87E5RJ46 101 aa8.78□□□□□ -1
COL9A1-208ENST00000489611 RYR3Q15413 4870 aa8.76□□□□□ -1.01
COL9A1-208ENST00000489611 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
COL9A1-208ENST00000489611 NDUFS5O43920 106 aa8.74□□□□□ -1.01
COL9A1-208ENST00000489611 LRP1BQ9NZR2 4599 aa8.72□□□□□ -1.01
COL9A1-208ENST00000489611 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
COL9A1-208ENST00000489611 LIMD2Q9BT23 127 aa8.72□□□□□ -1.01
COL9A1-208ENST00000489611 IGLV7-46A0A075B6I9 117 aa8.71□□□□□ -1.02
COL9A1-208ENST00000489611 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
COL9A1-208ENST00000489611 A0A087X002 238 aa8.7□□□□□ -1.02
COL9A1-208ENST00000489611 Q1T7F1 81 aa8.69□□□□□ -1.02
COL9A1-208ENST00000489611 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
COL9A1-208ENST00000489611 V9GYY9 64 aa8.68□□□□□ -1.02
COL9A1-208ENST00000489611 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
COL9A1-208ENST00000489611 PRR4Q16378 134 aa8.67□□□□□ -1.02
COL9A1-208ENST00000489611 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
COL9A1-208ENST00000489611 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
COL9A1-208ENST00000489611 MPLKIPQ8TAP9 179 aa8.66□□□□□ -1.02
COL9A1-208ENST00000489611 LINC00313P59037 77 aa8.65□□□□□ -1.02
COL9A1-208ENST00000489611 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
COL9A1-208ENST00000489611 C4orf48Q5BLP8 95 aa8.63□□□□□ -1.03
COL9A1-208ENST00000489611 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
COL9A1-208ENST00000489611 SEC61GP60059 68 aa8.62□□□□□ -1.03
COL9A1-208ENST00000489611 SPINK1P00995 79 aa8.62□□□□□ -1.03
COL9A1-208ENST00000489611 PLA2G1BP04054 148 aaKnown RBP8.62□□□□□ -1.03
COL9A1-208ENST00000489611 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
COL9A1-208ENST00000489611 RPS29P62273 56 aaKnown RBP8.6□□□□□ -1.03
COL9A1-208ENST00000489611 Q8N9P0 234 aaPredicted RBP8.6□□□□□ -1.03
COL9A1-208ENST00000489611 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
COL9A1-208ENST00000489611 TYMSOSQ8TAI1 123 aa8.59□□□□□ -1.03
COL9A1-208ENST00000489611 SMR3BP02814 79 aaPredicted RBP8.58□□□□□ -1.04
COL9A1-208ENST00000489611 PCOTHQ58A44 107 aa8.58□□□□□ -1.04
COL9A1-208ENST00000489611 APOBP04114 4563 aaKnown RBP8.58□□□□□ -1.04
COL9A1-208ENST00000489611 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
COL9A1-208ENST00000489611 COA5Q86WW8 74 aa8.54□□□□□ -1.04
COL9A1-208ENST00000489611 Q5W150 140 aa8.54□□□□□ -1.04
COL9A1-208ENST00000489611 VPS13BQ7Z7G8 4022 aa8.54□□□□□ -1.04
COL9A1-208ENST00000489611 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
COL9A1-208ENST00000489611 FAT1Q14517 4588 aa8.49□□□□□ -1.05
COL9A1-208ENST00000489611 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
COL9A1-208ENST00000489611 BRK1Q8WUW1 75 aa8.46□□□□□ -1.06
COL9A1-208ENST00000489611 EPPK1P58107 5090 aaKnown RBP8.45□□□□□ -1.06
COL9A1-208ENST00000489611 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
COL9A1-208ENST00000489611 ACYP2P14621 99 aa8.44□□□□□ -1.06
COL9A1-208ENST00000489611 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
COL9A1-208ENST00000489611 PSPHP1O15172 72 aa8.43□□□□□ -1.06
COL9A1-208ENST00000489611 HRES1P13985 223 aa8.43□□□□□ -1.06
COL9A1-208ENST00000489611 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
COL9A1-208ENST00000489611 HSPG2P98160 4391 aa8.4□□□□□ -1.06
COL9A1-208ENST00000489611 A8MUN3 132 aa8.4□□□□□ -1.06
COL9A1-208ENST00000489611 DMAC1Q96GE9 116 aa8.4□□□□□ -1.06
COL9A1-208ENST00000489611 RYR1P21817 5038 aa8.38□□□□□ -1.07
COL9A1-208ENST00000489611 LINC01558Q9Y6Z2 57 aa8.38□□□□□ -1.07
COL9A1-208ENST00000489611 Q5VV11 94 aa8.37□□□□□ -1.07
COL9A1-208ENST00000489611 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
COL9A1-208ENST00000489611 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
COL9A1-208ENST00000489611 Q75L30 129 aa8.35□□□□□ -1.07
COL9A1-208ENST00000489611 KIAA1109Q2LD37 5005 aa8.35□□□□□ -1.07
COL9A1-208ENST00000489611 Q5VSD8 79 aa8.34□□□□□ -1.07
COL9A1-208ENST00000489611 CHKB-CPT1BH3BT56 60 aa8.31□□□□□ -1.08
COL9A1-208ENST00000489611 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
COL9A1-208ENST00000489611 IGKV2D-30A0A075B6S6 120 aa8.28□□□□□ -1.08
COL9A1-208ENST00000489611 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
COL9A1-208ENST00000489611 C20orf166-AS1Q96NR2 134 aa8.25□□□□□ -1.09
COL9A1-208ENST00000489611 Q8N1X5 172 aa8.24□□□□□ -1.09
COL9A1-208ENST00000489611 A8MUU9 505 aa8.23□□□□□ -1.09
COL9A1-208ENST00000489611 A6NED7 52 aa8.21□□□□□ -1.09
COL9A1-208ENST00000489611 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
COL9A1-208ENST00000489611 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
COL9A1-208ENST00000489611 PMAIP1Q13794 54 aa8.16□□□□□ -1.1
COL9A1-208ENST00000489611 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
COL9A1-208ENST00000489611 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
COL9A1-208ENST00000489611 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
COL9A1-208ENST00000489611 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
COL9A1-208ENST00000489611 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
COL9A1-208ENST00000489611 A0A1B0GU69 56 aa8.11□□□□□ -1.11
COL9A1-208ENST00000489611 LCA10Q71F78 164 aa8.1□□□□□ -1.11
COL9A1-208ENST00000489611 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
COL9A1-208ENST00000489611 KRTAP10-8P60410 259 aa8.09□□□□□ -1.11
COL9A1-208ENST00000489611 FLG2Q5D862 2391 aaPredicted RBP8.08□□□□□ -1.12
COL9A1-208ENST00000489611 FAT3Q8TDW7 4589 aa8.07□□□□□ -1.12
COL9A1-208ENST00000489611 TNXBP22105 4242 aa8.06□□□□□ -1.12
COL9A1-208ENST00000489611 SPINK7P58062 85 aa8.05□□□□□ -1.12
COL9A1-208ENST00000489611 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
COL9A1-208ENST00000489611 MT1HL1P0DM35 61 aa8.01□□□□□ -1.13
COL9A1-208ENST00000489611 A8MU10 97 aa8.01□□□□□ -1.13
COL9A1-208ENST00000489611 HERC2O95714 4834 aa8□□□□□ -1.13
COL9A1-208ENST00000489611 UQCR11O14957 56 aa7.97□□□□□ -1.13
COL9A1-208ENST00000489611 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
COL9A1-208ENST00000489611 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
COL9A1-208ENST00000489611 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms