RNA–Protein interactions for RNA: ENST00000489491.1

PDZD8-204, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 289 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-204ENST00000489491 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
PDZD8-204ENST00000489491 FLNBO75369 2602 aaKnown RBP0.4□□□□□ -2.35
PDZD8-204ENST00000489491 USP24Q9UPU5 2620 aa0.4□□□□□ -2.35
PDZD8-204ENST00000489491 PKD1L2Q7Z442 2459 aa0.39□□□□□ -2.35
PDZD8-204ENST00000489491 HECTD4Q9Y4D8 3996 aa0.39□□□□□ -2.35
PDZD8-204ENST00000489491 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
PDZD8-204ENST00000489491 FSIP2Q5CZC0 6907 aa0.39□□□□□ -2.35
PDZD8-204ENST00000489491 SAMD9LQ8IVG5 1584 aa0.39□□□□□ -2.35
PDZD8-204ENST00000489491 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
PDZD8-204ENST00000489491 DCHS2Q6V1P9 2916 aa0.38□□□□□ -2.35
PDZD8-204ENST00000489491 MYCBP2O75592 4640 aa0.38□□□□□ -2.35
PDZD8-204ENST00000489491 H0YGG7 62 aa0.38□□□□□ -2.35
PDZD8-204ENST00000489491 KAAG1Q9UBP8 84 aa0.38□□□□□ -2.35
PDZD8-204ENST00000489491 DDX60Q8IY21 1712 aaKnown RBP0.38□□□□□ -2.35
PDZD8-204ENST00000489491 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
PDZD8-204ENST00000489491 DMXL1Q9Y485 3027 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 IGLV5-48A0A075B6I7 105 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 SPRR2DP22532 72 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 WFDC10BQ8IUB3 73 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 CUBNO60494 3623 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 KALRNO60229 2985 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 TRPM2O94759 1503 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
PDZD8-204ENST00000489491 DNAH3Q8TD57 4116 aa0.36□□□□□ -2.35
PDZD8-204ENST00000489491 SPENQ96T58 3664 aaKnown RBP0.36□□□□□ -2.35
PDZD8-204ENST00000489491 NCOR2Q9Y618 2525 aa0.36□□□□□ -2.35
PDZD8-204ENST00000489491 NDUFA1O15239 70 aa0.36□□□□□ -2.35
PDZD8-204ENST00000489491 GCN1Q92616 2671 aaKnown RBP0.36□□□□□ -2.35
PDZD8-204ENST00000489491 SACSQ9NZJ4 4579 aa0.36□□□□□ -2.35
PDZD8-204ENST00000489491 KMT2DO14686 5537 aa0.36□□□□□ -2.35
PDZD8-204ENST00000489491 MAP1AP78559 2803 aaPredicted RBP0.35□□□□□ -2.35
PDZD8-204ENST00000489491 AKAP9Q99996 3911 aa0.35□□□□□ -2.35
PDZD8-204ENST00000489491 ACANP16112 2415 aa0.35□□□□□ -2.35
PDZD8-204ENST00000489491 HTTP42858 3142 aa0.35□□□□□ -2.35
PDZD8-204ENST00000489491 SETD2Q9BYW2 2564 aaPredicted RBP0.35□□□□□ -2.35
PDZD8-204ENST00000489491 COL6A3P12111 3177 aa0.34□□□□□ -2.35
PDZD8-204ENST00000489491 HSPG2P98160 4391 aa0.34□□□□□ -2.35
PDZD8-204ENST00000489491 DNAH11Q96DT5 4516 aa0.34□□□□□ -2.35
PDZD8-204ENST00000489491 MMP24-AS1A0A0U1RRL7 71 aa0.34□□□□□ -2.36
PDZD8-204ENST00000489491 NOP10Q9NPE3 64 aaKnown RBP0.34□□□□□ -2.36
PDZD8-204ENST00000489491 NBASA2RRP1 2371 aa0.34□□□□□ -2.36
PDZD8-204ENST00000489491 PKHD1L1Q86WI1 4243 aa0.34□□□□□ -2.36
PDZD8-204ENST00000489491 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
PDZD8-204ENST00000489491 ANKRD11Q6UB99 2663 aaPredicted RBP0.33□□□□□ -2.36
PDZD8-204ENST00000489491 RANBP2P49792 3224 aaKnown RBP0.33□□□□□ -2.36
PDZD8-204ENST00000489491 MUC2Q02817 5179 aa0.33□□□□□ -2.36
PDZD8-204ENST00000489491 UTP20O75691 2785 aaKnown RBP0.33□□□□□ -2.36
PDZD8-204ENST00000489491 UBR4Q5T4S7 5183 aa0.32□□□□□ -2.36
PDZD8-204ENST00000489491 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
PDZD8-204ENST00000489491 FLGP20930 4061 aaPredicted RBP0.32□□□□□ -2.36
PDZD8-204ENST00000489491 WNK1Q9H4A3 2382 aa0.32□□□□□ -2.36
PDZD8-204ENST00000489491 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
PDZD8-204ENST00000489491 SPRR2BP35325 72 aa0.32□□□□□ -2.36
PDZD8-204ENST00000489491 DEFB131AP59861 70 aa0.32□□□□□ -2.36
PDZD8-204ENST00000489491 FLNAP21333 2647 aaKnown RBP0.32□□□□□ -2.36
PDZD8-204ENST00000489491 MAST4O15021 2626 aa0.31□□□□□ -2.36
PDZD8-204ENST00000489491 DNAH9Q9NYC9 4486 aa0.31□□□□□ -2.36
PDZD8-204ENST00000489491 C9orf92A6NGG3 77 aa0.31□□□□□ -2.36
PDZD8-204ENST00000489491 STAB1Q9NY15 2570 aa0.31□□□□□ -2.36
PDZD8-204ENST00000489491 NBEAQ8NFP9 2946 aa0.31□□□□□ -2.36
PDZD8-204ENST00000489491 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
PDZD8-204ENST00000489491 WDR87Q6ZQQ6 2873 aa0.3□□□□□ -2.36
PDZD8-204ENST00000489491 APC2O95996 2303 aa0.3□□□□□ -2.36
PDZD8-204ENST00000489491 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
PDZD8-204ENST00000489491 HIVEP1P15822 2718 aa0.29□□□□□ -2.36
PDZD8-204ENST00000489491 NBEAL2Q6ZNJ1 2754 aa0.29□□□□□ -2.36
PDZD8-204ENST00000489491 SPTBN5Q9NRC6 3674 aaKnown RBP0.29□□□□□ -2.36
PDZD8-204ENST00000489491 PCLOQ9Y6V0 5065 aa0.29□□□□□ -2.36
PDZD8-204ENST00000489491 NBPF19A0A087WUL8 3843 aa0.29□□□□□ -2.36
PDZD8-204ENST00000489491 LAMA5O15230 3695 aa0.29□□□□□ -2.36
PDZD8-204ENST00000489491 ANK3Q12955 4377 aaKnown RBP0.29□□□□□ -2.36
PDZD8-204ENST00000489491 TGP01266 2768 aa0.28□□□□□ -2.36
PDZD8-204ENST00000489491 CLTCL1P53675 1640 aa0.28□□□□□ -2.36
PDZD8-204ENST00000489491 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
PDZD8-204ENST00000489491 M0QY20 66 aa0.28□□□□□ -2.36
PDZD8-204ENST00000489491 EPG5Q9HCE0 2579 aa0.28□□□□□ -2.37
PDZD8-204ENST00000489491 FAT3Q8TDW7 4589 aa0.27□□□□□ -2.37
PDZD8-204ENST00000489491 SPTBN4Q9H254 2564 aa0.27□□□□□ -2.37
PDZD8-204ENST00000489491 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
PDZD8-204ENST00000489491 A8MTW9 85 aa0.27□□□□□ -2.37
PDZD8-204ENST00000489491 COL12A1Q99715 3063 aa0.27□□□□□ -2.37
PDZD8-204ENST00000489491 FRYQ5TBA9 3013 aa0.26□□□□□ -2.37
PDZD8-204ENST00000489491 H3BNG1 76 aa0.26□□□□□ -2.37
PDZD8-204ENST00000489491 ANKHD1Q8IWZ3 2542 aaKnown RBP0.26□□□□□ -2.37
PDZD8-204ENST00000489491 TEP1Q99973 2627 aaKnown RBP0.26□□□□□ -2.37
PDZD8-204ENST00000489491 ZANQ9Y493 2812 aa0.26□□□□□ -2.37
PDZD8-204ENST00000489491 SVEP1Q4LDE5 3571 aa0.26□□□□□ -2.37
PDZD8-204ENST00000489491 DNAH6Q9C0G6 4158 aa0.26□□□□□ -2.37
PDZD8-204ENST00000489491 CRYBG3Q68DQ2 2970 aa0.25□□□□□ -2.37
PDZD8-204ENST00000489491 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
PDZD8-204ENST00000489491 SNRPGP62308 76 aaKnown RBP0.25□□□□□ -2.37
PDZD8-204ENST00000489491 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
PDZD8-204ENST00000489491 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
PDZD8-204ENST00000489491 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
PDZD8-204ENST00000489491 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
PDZD8-204ENST00000489491 CHD7Q9P2D1 2997 aa0.24□□□□□ -2.37
PDZD8-204ENST00000489491 MTORP42345 2549 aa0.24□□□□□ -2.37
PDZD8-204ENST00000489491 TRIOO75962 3097 aa0.24□□□□□ -2.37
PDZD8-204ENST00000489491 M0QZ58 72 aa0.24□□□□□ -2.37
PDZD8-204ENST00000489491 SPRR2AP35326 72 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms