RNA–Protein interactions for RNA: ENST00000489491.1

PDZD8-204, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 289 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-204ENST00000489491 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
PDZD8-204ENST00000489491 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
PDZD8-204ENST00000489491 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
PDZD8-204ENST00000489491 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
PDZD8-204ENST00000489491 FOXD1Q16676 465 aa15.67■□□□□ 0.1
PDZD8-204ENST00000489491 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
PDZD8-204ENST00000489491 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
PDZD8-204ENST00000489491 ADRA2BP18089 450 aa14.72□□□□□ -0.05
PDZD8-204ENST00000489491 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
PDZD8-204ENST00000489491 MSH5O43196 834 aa14.43□□□□□ -0.1
PDZD8-204ENST00000489491 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
PDZD8-204ENST00000489491 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
PDZD8-204ENST00000489491 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
PDZD8-204ENST00000489491 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
PDZD8-204ENST00000489491 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
PDZD8-204ENST00000489491 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
PDZD8-204ENST00000489491 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
PDZD8-204ENST00000489491 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
PDZD8-204ENST00000489491 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
PDZD8-204ENST00000489491 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
PDZD8-204ENST00000489491 NCBP3Q53F19 620 aaKnown RBP12.61□□□□□ -0.39
PDZD8-204ENST00000489491 KCNA4P22459 653 aa12.53□□□□□ -0.4
PDZD8-204ENST00000489491 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
PDZD8-204ENST00000489491 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
PDZD8-204ENST00000489491 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
PDZD8-204ENST00000489491 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
PDZD8-204ENST00000489491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.463e-6■□□□□ 10.9
PDZD8-204ENST00000489491 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
PDZD8-204ENST00000489491 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
PDZD8-204ENST00000489491 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
PDZD8-204ENST00000489491 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
PDZD8-204ENST00000489491 DSG3P32926 999 aa11.71□□□□□ -0.53
PDZD8-204ENST00000489491 CAPN15O75808 1086 aa11.69□□□□□ -0.54
PDZD8-204ENST00000489491 ZBTB22O15209 634 aa11.61□□□□□ -0.55
PDZD8-204ENST00000489491 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
PDZD8-204ENST00000489491 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
PDZD8-204ENST00000489491 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
PDZD8-204ENST00000489491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.57
PDZD8-204ENST00000489491 HNRNPUL2Q1KMD3 747 aaKnown RBP11.52□□□□□ -0.57
PDZD8-204ENST00000489491 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
PDZD8-204ENST00000489491 ABCB7O75027 752 aa11.5□□□□□ -0.57
PDZD8-204ENST00000489491 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
PDZD8-204ENST00000489491 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
PDZD8-204ENST00000489491 APLP2Q06481 763 aa11.44□□□□□ -0.58
PDZD8-204ENST00000489491 POLA2Q14181 598 aa11.32□□□□□ -0.6
PDZD8-204ENST00000489491 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
PDZD8-204ENST00000489491 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
PDZD8-204ENST00000489491 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
PDZD8-204ENST00000489491 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
PDZD8-204ENST00000489491 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
PDZD8-204ENST00000489491 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
PDZD8-204ENST00000489491 POTEHQ6S545 545 aa10.94□□□□□ -0.66
PDZD8-204ENST00000489491 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
PDZD8-204ENST00000489491 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
PDZD8-204ENST00000489491 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
PDZD8-204ENST00000489491 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
PDZD8-204ENST00000489491 FBLN2P98095 1184 aa10.75□□□□□ -0.69
PDZD8-204ENST00000489491 SPDYE2BA6NHP3 402 aa10.7□□□□□ -0.7
PDZD8-204ENST00000489491 SPDYE6P0CI01 402 aa10.7□□□□□ -0.7
PDZD8-204ENST00000489491 SPDYE2Q495Y8 402 aa10.7□□□□□ -0.7
PDZD8-204ENST00000489491 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
PDZD8-204ENST00000489491 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
PDZD8-204ENST00000489491 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
PDZD8-204ENST00000489491 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
PDZD8-204ENST00000489491 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDZD8-204ENST00000489491 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDZD8-204ENST00000489491 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
PDZD8-204ENST00000489491 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
PDZD8-204ENST00000489491 EVX2Q03828 476 aa10.41□□□□□ -0.74
PDZD8-204ENST00000489491 PRKAR2AP13861 404 aaKnown RBP10.37□□□□□ -0.75
PDZD8-204ENST00000489491 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
PDZD8-204ENST00000489491 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
PDZD8-204ENST00000489491 SP7Q8TDD2 431 aaPredicted RBP10.31□□□□□ -0.76
PDZD8-204ENST00000489491 HAX1O00165 279 aa10.29□□□□□ -0.76
PDZD8-204ENST00000489491 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
PDZD8-204ENST00000489491 C19orf67A6NJJ6 358 aa10.24□□□□□ -0.77
PDZD8-204ENST00000489491 PROM2Q8N271 834 aa10.24□□□□□ -0.77
PDZD8-204ENST00000489491 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
PDZD8-204ENST00000489491 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
PDZD8-204ENST00000489491 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
PDZD8-204ENST00000489491 MNX1P50219 401 aaPredicted RBP10.1□□□□□ -0.79
PDZD8-204ENST00000489491 GABBR2O75899 941 aa10.05□□□□□ -0.8
PDZD8-204ENST00000489491 CD44P16070 742 aaKnown RBP10.03□□□□□ -0.8
PDZD8-204ENST00000489491 FKBP8Q14318 412 aa9.98□□□□□ -0.81
PDZD8-204ENST00000489491 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
PDZD8-204ENST00000489491 ZNF579Q8NAF0 562 aaKnown RBP9.92□□□□□ -0.82
PDZD8-204ENST00000489491 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
PDZD8-204ENST00000489491 PHF12Q96QT6 1004 aa9.86□□□□□ -0.83
PDZD8-204ENST00000489491 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
PDZD8-204ENST00000489491 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDZD8-204ENST00000489491 MIER1Q8N108 512 aa9.81□□□□□ -0.84
PDZD8-204ENST00000489491 RASEFQ8IZ41 740 aa9.78□□□□□ -0.84
PDZD8-204ENST00000489491 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.85
PDZD8-204ENST00000489491 CLCN6P51797 869 aa9.76□□□□□ -0.85
PDZD8-204ENST00000489491 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
PDZD8-204ENST00000489491 NUBP1P53384 320 aa9.74□□□□□ -0.85
PDZD8-204ENST00000489491 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
PDZD8-204ENST00000489491 MS4A3Q96HJ5 214 aa9.72□□□□□ -0.85
PDZD8-204ENST00000489491 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
PDZD8-204ENST00000489491 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms